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Query: NC_003197:2894344:2901480 Salmonella typhimurium LT2, complete genome

Start: 2901480, End: 2903354, Length: 1875

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2896651:2922787292278729246611875Salmonella enterica subsp. enterica serovar Typhimurium str. 798inner membrane protein01256
NC_016810:2871689:2924046292404629259201875Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein01256
NC_016856:2896630:2921705292170529235791875Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein01256
NC_016857:2871689:2924046292404629259201875Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein01256
NC_016860:2917910:2925046292504629269201875Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein01256
NC_016863:2844883:2869958286995828718321875Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein01256
NC_011083:2847318:2875986287598628778601875Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative inner membrane protein01255
NC_011149:2802199:2822085282208528239591875Salmonella enterica subsp. enterica serovar Agona str. SL483,putative inner membrane protein01185
NC_008253:1938975:1949001194900119508211821Escherichia coli 536, complete genomehypothetical protein1e-74281
NC_004431:2185750:2195846219584621976661821Escherichia coli CFT073, complete genomehypothetical protein1e-74281
NC_012856:1:7604760494721869Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein1e-0965.5