Pre_GI: BLASTP Hits

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Query: NC_003197:2894344:2897643 Salmonella typhimurium LT2, complete genome

Start: 2897643, End: 2899322, Length: 1680

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2896651:2918950291895029206291680Salmonella enterica subsp. enterica serovar Typhimurium str. 798solute-binding protein01155
NC_016863:2844883:2866121286612128678001680Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component01155
NC_016860:2917910:2921209292120929228881680Salmonella enterica subsp. enterica serovar Typhimurium strputative dipeptide/oligopeptide/nickel ABC transporter substrate binding protein01155
NC_016857:2871689:2920209292020929218881680Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component01155
NC_016856:2896630:2917868291786829195471680Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component01155
NC_016810:2871689:2920209292020929218881680Salmonella enterica subsp. enterica serovar Typhimurium strputative solute-binding protein01155
NC_011083:2847318:2872149287214928738281680Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component01155
NC_011751:3048490:3071573307157330732671695Escherichia coli UMN026 chromosome, complete genomeputative dipeptide/oligopeptide/nickel ABC-type transport systems, periplasmic component from bacteriophage origin01125
NC_009648:3224495:3251320325132032529991680Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component01110
NC_012912:647369:6666046666046682711668Dickeya zeae Ech1591, complete genomeextracellular solute-binding protein family 55e-47189
NC_012583:683887:6842016842016858981698Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein3e-45183
NC_012667:839318:8410448410448427411698Vibrio cholerae MJ-1236 chromosome 2, complete genomeSgrR sugar-phosphate stress transcriptional activator of SgrS small RNA5e-45182
NC_016047:1234743:1247897124789712496241728Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeoligopeptide ABC transporter substrate-binding protein4e-1996.7
NC_016641:1369424:1387603138760313893421740Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter periplasmic protein1e-1792
NC_013172:3093467:3113540311354031151261587Brachybacterium faecium DSM 4810, complete genomeABC-type dipeptide transport system, periplasmic component2e-0758.2