Pre_GI: BLASTP Hits

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Query: NC_003197:2894344:2894907 Salmonella typhimurium LT2, complete genome

Start: 2894907, End: 2895749, Length: 843

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017046:2896651:291621429162142917056843Salmonella enterica subsp. enterica serovar Typhimurium str. 798glucose-6-phosphate isomerase9e-166582
NC_016863:2844883:286338528633852864227843Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein9e-166582
NC_016860:2917910:291847329184732919315843Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein9e-166582
NC_016857:2871689:291747329174732918315843Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein9e-166582
NC_016856:2896630:291513229151322915974843Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein9e-166582
NC_016810:2871689:291747329174732918315843Salmonella enterica subsp. enterica serovar Typhimurium strputative glucose-6-phosphate isomerase9e-166582
NC_011083:2847318:286941328694132870255843Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative cytoplasmic protein9e-166582
NC_011751:3048490:306900030690003069842843Escherichia coli UMN026 chromosome, complete genomeputative Glucose-6-phosphate isomerase from bacteriophage origin7e-157553
NC_009648:3224495:324873232487323249574843Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative cytoplasmic protein5e-155546
NC_013849:627811:630159630159630869711Ferroglobus placidus DSM 10642 chromosome, complete genomeglucose-6-phosphate isomerase1e-21103
NC_014002:1772060:177651217765121777243732Methanohalophilus mahii DSM 5219 chromosome, complete genomeglucose-6-phosphate isomerase5e-21101
NC_013741:1037176:105573610557361056452717Archaeoglobus profundus DSM 5631, complete genomeglucose-6-phosphate isomerase6e-21101
NC_007955:1566189:158379015837901584521732Methanococcoides burtonii DSM 6242, complete genomeputative glucose-6-phosphate isomerase3e-1892.4
NC_013665:257438:280485280485281252768Methanocella paludicola SANAE, complete genomeputative glucose-6-phosphate isomerase4e-1789
NC_015474:723553:771804771804772373570Pyrococcus sp. NA2 chromosome, complete genomeglucose-6-phosphate isomerase6e-0961.6