Pre_GI: BLASTP Hits

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Query: NC_003197:1611302:1611302 Salmonella typhimurium LT2, complete genome

Start: 1611302, End: 1612045, Length: 744

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016856:1621279:162127916212791622022744Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative Ni/Fe hydrogenase 1 b-type cytochrome subunit3e-141500
NC_003198:1463253:148298414829841483712729Salmonella enterica subsp. enterica serovar Typhi str. CT18,Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC28e-139492
NC_010067:1414000:143137214313721432100729Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-138489
NC_015761:1488807:148880714888071489535729Salmonella bongori NCTC 12419, complete genomeNi/Fe-hydrogenase 1 b-type cytochrome subunit HyaC25e-133473
NC_010067:1116148:111674111167411117472732Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-67255
NC_011745:1055354:107828710782871078994708Escherichia coli ED1a chromosome, complete genomehydrogenase 1 b-type cytochrome subunit5e-65247
NC_013851:2610847:262691226269122627610699Allochromatium vinosum DSM 180 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-61234
NC_009720:2424975:243662124366212437373753Xanthobacter autotrophicus Py2, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-60230
NC_017249:8358438:836198283619828362674693Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein8e-45180
NC_004463:1872537:189177418917741892508735Bradyrhizobium japonicum USDA 110, complete genomeHupC protein homolog1e-44180
NC_011060:1947795:194910719491071949790684Pelodictyon phaeoclathratiforme BU-1, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit3e-36151
NC_011059:921690:938527938527939216690Prosthecochloris aestuarii DSM 271, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit3e-35148
NC_018515:3411276:341443934144393415137699Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit2e-29129
NC_020411:28995:466544665447349696Hydrogenobaculum sp. HO, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-28124
NC_015557:30622:466204662047315696Hydrogenobaculum sp. 3684 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-28124
NC_015587:28997:466564665647351696Hydrogenobaculum sp. SHO chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-28124
NC_009921:4035225:403694340369434037629687Frankia sp. EAN1pec, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-23107
NC_012483:3529895:353655035365503537344795Acidobacterium capsulatum ATCC 51196, complete genomenickel-iron hydrogenase, b-type cytochrome subunit1e-1583.2
NC_011206:2040000:205946320594632060218756Acidithiobacillus ferrooxidans ATCC 53993, complete genomecytochrome B5614e-1272
NC_015499:352934:363157363157363738582Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit1e-1170.1
NC_011761:2131911:217142121714212172176756Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete[Ni/Fe] hydrogenase, b-type cytochrome subunit3e-1168.9
NC_009092:1989977:201501620150162015687672Shewanella loihica PV-4, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit6e-1167.8
NC_007575:1484305:150028115002811501012732Sulfurimonas denitrificans DSM 1251, complete genomenickel-dependent hydrogenase b-type cytochrome subunit2e-1066.2
NC_014541:1165991:119702411970241197692669Ferrimonas balearica DSM 9799 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit7e-0961.2
NC_018515:937994:954045954045954635591Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit9e-0857.4
NC_021150:4929670:497048249704824971180699Azotobacter vinelandii CA6, complete genomeNickel-dependent hydrogenase b-type cytochrome subunit2e-0653.1
NC_012560:4929683:497049549704954971193699Azotobacter vinelandii DJ, complete genomeNickel-dependent hydrogenase b-type cytochrome subunit2e-0653.1
NC_009901:3317068:333578533357853336525741Shewanella pealeana ATCC 700345, complete genomecytochrome B5612e-0652.8