Pre_GI: BLASTP Hits

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Query: NC_003197:1471349:1483095 Salmonella typhimurium LT2, complete genome

Start: 1483095, End: 1483337, Length: 243

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016863:1429516:144126214412621441504243Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1secretion system effector2e-26117
NC_011294:1723852:174583717458371746079243Salmonella enterica subsp. enterica serovar Enteritidis strsecretion system protein2e-26117
NC_016810:1428201:143994714399471440189243Salmonella enterica subsp. enterica serovar Typhimurium strtype three secretion system protein2e-26117
NC_016856:1481325:149307114930711493313243Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Ssecretion system effector2e-26117
NC_016857:1428201:143994714399471440189243Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system effector2e-26117
NC_016860:1469066:148078214807821481024243Salmonella enterica subsp. enterica serovar Typhimurium strputative secretion system protein2e-26117
NC_004631:1325817:133756213375621337804243Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secretion system protein4e-26116
NC_011149:1710601:173264617326461732888243Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion system protein, YseE family4e-26116
NC_003198:1621347:164333216433321643574243Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secretion system protein4e-26116
NC_011094:1435347:144706214470621447304243Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion system protein, YseE family protein4e-26116
NC_016832:1324820:133653513365351336777243Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion system protein, YseE4e-26116
NC_011083:1476894:148861014886101488852243Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion system protein, YseE family4e-26116
NC_006905:1509093:152083815208381521080243Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system effector SsaE4e-26116
NC_012125:2360815:238280023828002383042243Salmonella enterica subsp. enterica serovar Paratyphi C strainsecretion system protein4e-26116
NC_011274:1763676:178566117856611785903243Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91secretion system protein1e-25115
NC_006511:1506915:152896015289601529202243Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secretion system protein3e-25113
NC_011147:1502096:152414115241411524383243Salmonella enterica subsp. enterica serovar Paratyphi A strsecretion system protein3e-25113
NC_011205:1852665:187465018746501874883234Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853YseE family type III secretion system protein2e-24110
NC_011080:1470794:148254514825451482778234Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion system protein, YseE family2e-24110
NC_016831:1236786:124853812485381248771234Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative secretion system protein1e-23108
NC_010067:1507823:153327415332741533537264Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein8e-22102
NC_017046:1428272:144004514400451440260216Salmonella enterica subsp. enterica serovar Typhimurium str. 798type three secretion system protein4e-2199.8
NC_010102:1616530:163857616385761638791216Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-2199.8