Pre_GI: BLASTP Hits

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Query: NC_003155:4592000:4621735 Streptomyces avermitilis MA-4680, complete genome

Start: 4621735, End: 4622223, Length: 489

Host Lineage: Streptomyces avermitilis; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain (ATCC 31267) was isolated and characterized in 1978 by R. Burg and colleagues from a soil sample collected in Shizuoka Prefecture, Japan. Antibiotic-producing bacterium. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes. This organism is a well known producer of the anti-parasitic agent avermectin which is widely used to rid livestock of worm and insect infestations and to protect large numbers of people from river blindness in sub-Saharan Africa.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:4906639:491378649137864914274489Streptomyces avermitilis MA-4680, complete genomeMutT-like protein3e-84310
NC_013929:5248000:526069552606955261102408Streptomyces scabiei 87.22 chromosome, complete genomeNUDIX hydrolase9e-69258
NC_013595:151500:159764159764160213450Streptosporangium roseum DSM 43021, complete genomehydrolase, NUDIX family5e-44176
NC_016948:678939:688874688874689302429Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein9e-35145
NC_013235:682902:695587695587696021435Nakamurella multipartita DSM 44233, complete genomeNUDIX hydrolase2e-34144
NC_013235:508585:5230335230335246251593Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF11526e-33139
NC_020133:5485528:549918654991865499614429Mycobacterium liflandii 128FXT, complete genomehypothetical protein8e-33139
NC_017904:666285:674377674377674808432Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein9e-33139
NC_021177:4124839:413835541383554138819465Streptomyces fulvissimus DSM 40593, complete genomeNUDIX hydrolase7e-32136
NC_016114:3575955:358400335840033584467465Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeNUDIX hydrolase6e-32136
NC_014666:7152782:716561971656197166053435Frankia sp. EuI1c chromosome, complete genomeNUDIX hydrolase6e-32136
NC_015656:1469501:148492414849241485364441Frankia symbiont of Datisca glomerata chromosome, complete genomeNUDIX hydrolase3e-30130
NC_003888:6103534:613715661371566137551396Streptomyces coelicolor A3(2), complete genomemutT-like protein1e-27122
NC_003888:3602753:360978936097893610178390Streptomyces coelicolor A3(2), complete genomeMutT-like protein3e-26117
NC_014210:723719:732929732929733354426Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,NUDIX hydrolase3e-25114
NC_015434:6020178:603212560321256032595471Verrucosispora maris AB-18-032 chromosome, complete genomeNUDIX hydrolase2e-1375.1
NC_013595:9547254:956309795630979563573477Streptosporangium roseum DSM 43021, complete genomeADP-ribose pyrophosphatase-like protein2e-1374.7
NC_007777:135222:161702161702162172471Frankia sp. CcI3, complete genomeNUDIX hydrolase1e-1169.3
NC_006361:792904:800338800338800820483Nocardia farcinica IFM 10152, complete genomeputative MutT family protein4e-1167.4
NC_013510:5499447:550561555056155506091477Thermomonospora curvata DSM 43183, complete genomeNUDIX hydrolase1e-1065.5
NC_010612:3813481:381430538143053814772468Mycobacterium marinum M, complete genomehypothetical protein3e-1064.3
NC_013595:3388000:339987533998753400345471Streptosporangium roseum DSM 43021, complete genomeADP-ribose pyrophosphatase-like protein4e-1063.9
NC_015944:384119:3970483970483982771230Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceputative sugar phosphatase of HAD superfamily7e-1063.2
NC_008705:3377697:339048833904883390955468Mycobacterium sp. KMS, complete genomeNUDIX hydrolase6e-1063.2
NC_009077:3323291:333608233360823336549468Mycobacterium sp. JLS, complete genomeNUDIX hydrolase6e-1063.2
NC_008146:3349415:336220633622063362673468Mycobacterium sp. MCS, complete genomeNUDIX hydrolase6e-1063.2
NC_016947:2380500:243760724376072438074468Mycobacterium intracellulare MOTT-02 chromosome, complete genomeNUDIX hydrolase6e-1063.2
NC_008595:3914463:392772739277273928194468Mycobacterium avium 104, complete genomenudix hydrolase9e-1062.8
NC_013406:5020690:502648250264825026961480Paenibacillus sp. Y412MC10 chromosome, complete genomeNUDIX hydrolase1e-0962.4
NC_015953:1860946:186197818619781862448471Streptomyces sp. SirexAA-E chromosome, complete genomeNUDIX hydrolase1e-0962.4
NC_019673:1420198:142711114271111427626516Saccharothrix espanaensis DSM 44229 complete genomeNUDIX family hydrolase1e-0962.4
NC_012797:1:258442584426323480Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencehypothetical protein1e-0962.4
NC_013093:626473:632186632186632659474Actinosynnema mirum DSM 43827, complete genomeNUDIX hydrolase4e-0960.8
NC_010159:3033989:305426030542603054646387Yersinia pestis Angola, complete genomemutator mutT protein4e-0960.5
NC_017208:516127:531376531376531837462Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeMutator mutT protein8e-0959.7
NC_014171:521996:537570537570538031462Bacillus thuringiensis BMB171 chromosome, complete genomemutator MutT protein9e-0959.3
NC_013406:5066769:509806350980635098470408Paenibacillus sp. Y412MC10 chromosome, complete genomeNUDIX hydrolase1e-0858.9
NC_013131:10370765:103771161037711610377583468Catenulispora acidiphila DSM 44928, complete genomeNUDIX hydrolase1e-0858.9
NC_007168:2448422:245294424529442453363420Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0858.5
NC_011026:2624775:2631907263190726329891083Chloroherpeton thalassium ATCC 35110, complete genomeA/G-specific adenine glycosylase2e-0858.5
NC_015957:115133:124416124416124883468Streptomyces violaceusniger Tu 4113 chromosome, complete genomeNUDIX hydrolase3e-0857.8
NC_014833:406889:413473413473413931459Ruminococcus albus 7 chromosome, complete genomeNUDIX hydrolase4e-0857.4
NC_008062:81338:872898728987750462Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceNUDIX hydrolase4e-0857.4
NC_018750:770500:790424790424790906483Streptomyces venezuelae ATCC 10712, complete genomeputative MutT or NUDIX-family protein3e-0857.4
NC_009725:496443:5486775486775499121236Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein4e-0857
NC_020410:495184:5312675312675325051239Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized 45.4 kDa protein in thiaminase I 5'region (Protein nagD homolog)5e-0857
NC_008544:55451:651086510865539432Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceNUDIX hydrolase5e-0857
NC_015957:10505870:105241971052419710524667471Streptomyces violaceusniger Tu 4113 chromosome, complete genomeNUDIX hydrolase7e-0856.6
NC_014215:322362:329883329883330326444Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,NUDIX hydrolase1e-0755.8
NC_009925:1109770:112785411278541128234381Acaryochloris marina MBIC11017, complete genomeADP-ribose pyrophosphatase (NUDIX hydroxylase)1e-0755.5
NC_017186:361444:385916385916386392477Amycolatopsis mediterranei S699 chromosome, complete genomeNUDIX hydrolase1e-0755.5
NC_010296:54000:739007390074304405Microcystis aeruginosa NIES-843, complete genomemutator protein1e-0755.5
NC_013929:6251989:626037462603746260784411Streptomyces scabiei 87.22 chromosome, complete genomeNUDIX hydrolase2e-0755.1
NC_016114:3439273:345342534534253453892468Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeNUDIX hydrolase3e-0754.3
NC_014622:3955851:397555439755543976018465Paenibacillus polymyxa SC2 chromosome, complete genomentp pyrophosphohydrolase3e-0754.3
NC_012470:580373:606301606301606777477Streptococcus equi subsp. zooepidemicus, complete genomeMutT/NUDIX family protein3e-0754.3
NC_009921:6421387:642320864232086423678471Frankia sp. EAN1pec, complete genomeNUDIX hydrolase4e-0753.9
NC_008345:2717945:272258127225812722985405Shewanella frigidimarina NCIMB 400, complete genomeNUDIX hydrolase5e-0753.5
NC_006576:2423250:244080824408082441254447Synechococcus elongatus PCC 6301, complete genomemutator MutT homolog8e-0753.1
NC_007604:1875268:187579718757971876243447Synechococcus elongatus PCC 7942, complete genomemutator MutT-like8e-0753.1
NC_013406:5066769:5080674508067450816991026Paenibacillus sp. Y412MC10 chromosome, complete genomehypothetical protein8e-0753.1
NC_018750:2696000:270336927033692703842474Streptomyces venezuelae ATCC 10712, complete genomeMutT protein1e-0652.4
NC_015656:4367764:436877843687784369251474Frankia symbiont of Datisca glomerata chromosome, complete genomeNUDIX hydrolase1e-0652.4
NC_013715:1606396:161052716105271611009483Rothia mucilaginosa DY-18, complete genomeNTP pyrophosphohydrolase including oxidative damage repair enzyme1e-0652
NC_014414:1140357:118132411813241181785462Parvularcula bermudensis HTCC2503 chromosome, complete genomeNUDIX hydrolase3e-0651.2
NC_008212:2865737:286703028670302867521492Haloquadratum walsbyi DSM 16790, complete genomeMut/nudix family protein3e-0651.2
NC_009439:3770282:380120938012093801772564Pseudomonas mendocina ymp, complete genomeNUDIX hydrolase6e-0650.1
NC_019902:3397170:340126034012603401697438Thioalkalivibrio nitratireducens DSM 14787, complete genomePutative 7,8-Dihydro-8-oxoguanine-triphosphatase6e-0650.1
NC_019897:1224798:124622312462231246681459Thermobacillus composti KWC4 chromosome, complete genomeZn-finger containing NTP pyrophosphohydrolase8e-0649.7