Pre_GI: BLASTP Hits

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Query: NC_003143:741169:764925 Yersinia pestis CO92, complete genome

Start: 764925, End: 765920, Length: 996

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017160:737000:760811760811761806996Yersinia pestis D182038 chromosome, complete genomehypothetical protein0693
NC_014029:792719:816470816470817465996Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0693
NC_008149:650706:673752673752674747996Yersinia pestis Nepal516, complete genomehypothetical protein0693
NC_005810:3333000:335615433561543357149996Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein0693
NC_009381:522731:545775545775546770996Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0691
NC_009792:2688747:269279726927972693786990Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-97355