Pre_GI: BLASTP Hits

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Query: NC_003143:4105754:4125645 Yersinia pestis CO92, complete genome

Start: 4125645, End: 4126985, Length: 1341

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:1729922:1749813174981317511531341Yersinia pestis A1122 chromosome, complete genomepeptidase PmbA0803
NC_017154:3997810:4017701401770140190411341Yersinia pestis D106004 chromosome, complete genomePutative modulator of DNA gyrase0803
NC_014029:4057696:4077587407758740789271341Yersinia pestis Z176003 chromosome, complete genomePutative modulator of DNA gyrase0803
NC_009381:321577:3414693414693428091341Yersinia pestis Pestoides F chromosome, complete genomepeptidase PmbA0803
NC_009708:483253:5033115033115046511341Yersinia pseudotuberculosis IP 31758 chromosome, complete genomepeptidase PmbA0799
NC_009655:866281:8695768695768709311356Actinobacillus succinogenes 130Z chromosome, complete genomepeptidase U62 modulator of DNA gyrase2e-138492
NC_004347:4211241:4231892423189242332351344Shewanella oneidensis MR-1, complete genomepmba protein2e-130466
NC_017505:841496:8620538620538633841332Neisseria meningitidis alpha710 chromosome, complete genomePmbA protein2e-104379
NC_017517:867595:8880708880708894011332Neisseria meningitidis M01-240355 chromosome, complete genomeprotein PmbA9e-103374
NC_017515:1429317:1429317142931714306481332Neisseria meningitidis M04-240196 chromosome, complete genomeprotein PmbA9e-103374
NC_003112:844000:8650308650308663611332Neisseria meningitidis MC58, complete genomepmbA protein9e-103374
NC_017512:760000:7795607795607808911332Neisseria meningitidis WUE 2594, complete genomeputative PmbA-like protein6e-101368
NC_003116:988000:1008771100877110101021332Neisseria meningitidis Z2491, complete genomehypothetical protein6e-101368
NC_010120:788000:8082748082748096051332Neisseria meningitidis 053442, complete genomepmbA protein2e-99363
NC_014910:1200605:1203139120313912045601422Alicycliphilus denitrificans BC chromosome, complete genomepeptidase u62 modulator of DNA gyrase3e-96352
NC_007973:2773427:2795043279504327964101368Ralstonia metallidurans CH34 chromosome 1, complete sequencepeptidase U62, modulator of DNA gyrase5e-94345
NC_012559:1663214:1664482166448216655791098Laribacter hongkongensis HLHK9, complete genomePmbA6e-80298
NC_014540:2908912:2921753292175329231111359Burkholderia sp. CCGE1003 chromosome 2, complete sequencepeptidase U62 modulator of DNA gyrase3e-60233
NC_006677:2042387:2044485204448520458161332Gluconobacter oxydans 621H, complete genomePmbA protein6e-60231
NC_014006:63000:8400884008853541347Sphingobium japonicum UT26S chromosome 1, complete genomeputative Zn-dependent protease PmbA2e-59230
NC_016816:1545354:1548358154835815497071350Pantoea ananatis LMG 5342, complete genomemicrocin-processing peptidase 13e-58226
NC_014323:3195178:3210664321066432120371374Herbaspirillum seropedicae SmR1 chromosome, complete genomeZn-dependent protease TLDE protein2e-53210
NC_006833:902744:9174909174909188241335Wolbachia endosymbiont strain TRS of Brugia malayi, completeInactivated homolog of predicted Zn-dependent protease, PmbA7e-53208
NC_007354:569321:5878725878725892061335Ehrlichia canis str. Jake, complete genomePeptidase U62, modulator of DNA gyrase2e-51203
NC_006831:664000:6782586782586796251368Ehrlichia ruminantium str. Gardel, complete genomePmbA protein homolog8e-49194
NC_006832:668913:6826316826316839981368Ehrlichia ruminantium str. Welgevonden, complete genomePmbA protein homolog3e-48193
NC_005295:689500:7027857027857041521368Ehrlichia ruminantium str. Welgevonden, complete genomeputative PmbA protein3e-48193
NC_007799:647514:6535166535166548621347Ehrlichia chaffeensis str. Arkansas, complete genomepmbA protein2e-46186
NC_013642:505518:5244775244775257841308Thermotoga naphthophila RKU-10, complete genomepeptidase U62 modulator of DNA gyrase1e-35150
NC_011978:1812000:1813092181309218143961305Thermotoga neapolitana DSM 4359, complete genomePmbA-related protein3e-34146
NC_020291:552104:5682575682575696001344Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeTldD/PmbA family protein6e-32139
NC_010723:420025:4407604407604421031344Clostridium botulinum E3 str. Alaska E43, complete genomeTldD/PmbA family protein4e-31136
NC_010674:426256:4459544459544472971344Clostridium botulinum B str. Eklund 17B, complete genomeTldD/PmbA family protein1e-29131
NC_015707:826649:8468988468988482231326Thermotoga thermarum DSM 5069 chromosome, complete genomepeptidase U62 modulator of DNA gyrase5e-29129
NC_016641:5808113:5809721580972158110641344Paenibacillus terrae HPL-003 chromosome, complete genomeZn-dependent protease1e-28127
NC_010730:1519458:1530420153042015317481329Sulfurihydrogenibium sp. YO3AOP1, complete genomepeptidase U62 modulator of DNA gyrase1e-28127
NC_010003:1242846:1249401124940112507351335Petrotoga mobilis SJ95, complete genomepeptidase U62 modulator of DNA gyrase3e-22106
NC_008262:381323:3884113884113897601350Clostridium perfringens SM101, complete genomeTldD/PmbA family protein3e-22106
NC_008261:381297:3859853859853873341350Clostridium perfringens ATCC 13124, complete genomeTldD/PmbA family protein4e-22106
NC_014658:620819:6216416216416229331293Methanothermus fervidus DSM 2088 chromosome, complete genomepeptidase u62 modulator of DNA gyrase2e-21103
NC_015216:2276929:2291858229185822931621305Methanobacterium sp. AL-21 chromosome, complete genomepeptidase U62 modulator of DNA gyrase2e-20100
NC_006624:1952554:1951190195119019525571368Thermococcus kodakarensis KOD1, complete genomezinc-dependent protease, TldD/PmbA family1e-1997.8
NC_013457:979102:9916979916979930401344Vibrio sp. Ex25 chromosome 2, complete genomepredicted Zn-dependent protease9e-1995.1
NC_013894:543901:5456305456305469521323Thermocrinis albus DSM 14484 chromosome, complete genomepeptidase U62 modulator of DNA gyrase1e-1894.7
NC_013410:3192836:3208124320812432094521329Fibrobacter succinogenes subsp. succinogenes S85 chromosome,peptidase U62 modulator of DNA gyrase7e-1892
NC_003552:4054908:4054908405490840562271320Methanosarcina acetivorans C2A, complete genomePmbA/TldD family protein2e-1790.9
NC_020291:552104:5668695668695682541386Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeprotein TldD9e-1685.1
NC_008262:381323:3870103870103883951386Clostridium perfringens SM101, complete genometldD protein truncated5e-1479.3
NC_008261:381297:3845843845843859691386Clostridium perfringens ATCC 13124, complete genomeTldD/PmbA family protein7e-1479
NC_015707:826649:8455138455138469011389Thermotoga thermarum DSM 5069 chromosome, complete genomemicrocin-processing peptidase 24e-1376.6
NC_016051:1385490:1405654140565414070151362Thermococcus sp. AM4 chromosome, complete genomeTldD/PmbA family zinc-dependent protease2e-1273.9
NC_000911:2747604:2760689276068927620291341Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-1273.9
NC_017039:2745432:2758517275851727598571341Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein2e-1273.9
NC_017052:2745420:2758505275850527598451341Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein2e-1273.9
NC_017277:2746421:2759506275950627608461341Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-1273.9
NC_010674:426256:4445684445684459501383Clostridium botulinum B str. Eklund 17B, complete genomeTldD protein2e-1273.9
NC_005125:637333:6511216511216524251305Gloeobacter violaceus PCC 7421, complete genomehypothetical protein3e-1273.6
NC_010723:420025:4393744393744407561383Clostridium botulinum E3 str. Alaska E43, complete genomeTldD protein3e-1273.2
NC_005877:864118:8798138798138811261314Picrophilus torridus DSM 9790, complete genomePmbA protein5e-1272.8
NC_013771:684966:7096017096017109411341Cyanobacterium UCYN-A, complete genomepredicted Zn-dependent protease-like protein4e-1272.8
NC_016051:1385490:1407021140702114083281308Thermococcus sp. AM4 chromosome, complete genomeTldD/PmbA family zinc-dependent protease4e-1272.8
NC_003552:4054908:4056220405622040575751356Methanosarcina acetivorans C2A, complete genomePmbA/TldD family protein1e-1171.6
NC_000961:1366000:1386469138646913878451377Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1171.2
NC_011979:1683964:1705965170596517073471383Geobacter sp. FRC-32, complete genomepeptidase U62 modulator of DNA gyrase2e-1170.5
NC_013407:1610221:1630496163049616317491254Methanocaldococcus vulcanius M7, complete genomepeptidase U62 modulator of DNA gyrase4e-1169.7
NC_005070:1144777:1186170118617011875341365Synechococcus sp. WH 8102, complete genomepossible modulator of DNA gyrase6e-1169.3
NC_010003:1242846:1247989124798912494011413Petrotoga mobilis SJ95, complete genomepeptidase U62 modulator of DNA gyrase6e-1169.3
NC_013457:979102:9930409930409944251386Vibrio sp. Ex25 chromosome 2, complete genomeputative TldD protein6e-1168.9
NC_013926:1166454:1183525118352511848261302Aciduliprofundum boonei T469 chromosome, complete genomepeptidase U62 modulator of DNA gyrase8e-1168.9
NC_009465:224564:2295482295482309751428Candidatus Vesicomyosocius okutanii HA, complete genomePmbA/TldD family DNA gyrase modulator1e-1068.6
NC_000961:1366000:1387847138784713891841338Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-1067
NC_014122:842560:8550218550218562501230Methanocaldococcus infernus ME chromosome, complete genomepeptidase U62 modulator of DNA gyrase4e-1066.6
NC_003413:1448377:1470356147035614716841329Pyrococcus furiosus DSM 3638, complete genomehypothetical protein3e-1066.6
NC_007513:1126914:1132046113204611334581413Synechococcus sp. CC9902, complete genomeputative modulator of DNA gyrase; TldD5e-1066.2
NC_008319:1167213:1182748118274811840941347Synechococcus sp. CC9311, complete genometldD/pmbA family protein6e-1065.9
NC_015222:2136657:2160899216089921623741476Nitrosomonas sp. AL212 chromosome, complete genomepeptidase U62 modulator of DNA gyrase1e-0964.7
NC_013416:939668:9554379554379568851449Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTldD2e-0964.3
NC_003413:1448377:1468976146897614703431368Pyrococcus furiosus DSM 3638, complete genomehypothetical TLDD protein2e-0963.9
NC_016641:5808113:5811068581106858124621395Paenibacillus terrae HPL-003 chromosome, complete genomepeptidase u62 modulator of DNA gyrase6e-0962.4
NC_002578:828000:8684178684178697091293Thermoplasma acidophilum DSM 1728, complete genomehypothetical protein9e-0962
NC_014323:3195178:3209126320912632106311506Herbaspirillum seropedicae SmR1 chromosome, complete genomeZn-dependent protease TldD protein1e-0861.6
NC_007513:1126914:1133461113346111348281368Synechococcus sp. CC9902, complete genomepossible modulator of DNA gyrase2e-0860.5
NC_013209:2782500:2799102279910228005591458Acetobacter pasteurianus IFO 3283-01, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_017100:2782303:2798894279889428003511458Acetobacter pasteurianus IFO 3283-03, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_017108:2779303:2796231279623127976881458Acetobacter pasteurianus IFO 3283-12, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_017111:2779321:2796249279624927977061458Acetobacter pasteurianus IFO 3283-32, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_017121:2781000:2797651279765127991081458Acetobacter pasteurianus IFO 3283-07, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_017125:2782283:2798874279887428003311458Acetobacter pasteurianus IFO 3283-22, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_017146:2782325:2798916279891628003731458Acetobacter pasteurianus IFO 3283-26, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_017150:2689920:2706848270684827083051458Acetobacter pasteurianus IFO 3283-01-42C, complete genomeDNA gyrase modulator TldD4e-0860.1
NC_015942:2544407:2546427254642725478721446Acidithiobacillus ferrivorans SS3 chromosome, complete genomepeptidase U62 modulator of DNA gyrase5e-0859.3
NC_011978:1812000:1814393181439318158081416Thermotoga neapolitana DSM 4359, complete genomeTldD protein2e-0757.4
NC_013642:505518:5230925230925244801389Thermotoga naphthophila RKU-10, complete genomepeptidase U62 modulator of DNA gyrase3e-0757
NC_008319:1167213:1184118118411811855631446Synechococcus sp. CC9311, complete genomeTldD protein7e-0755.8
NC_005071:835005:8392978392978407421446Prochlorococcus marinus str. MIT 9313, complete genomeputative modulator of DNA gyrase; TldD8e-0755.5
NC_014540:2908912:2923270292327029247541485Burkholderia sp. CCGE1003 chromosome 2, complete sequencepeptidase U62 modulator of DNA gyrase8e-0755.5
NC_005070:1144777:1187537118753711889461410Synechococcus sp. WH 8102, complete genomeputative modulator of DNA gyrase; TldD1e-0655.1
NC_008312:1725763:1740339174033917417961458Trichodesmium erythraeum IMS101, complete genomepeptidase U62, modulator of DNA gyrase3e-0653.9
NC_000854:50407:6401264012653611350Aeropyrum pernix K1, complete genomeprobable peptidase4e-0653.1
NC_015633:2919501:2937237293723729386821446Vibrio anguillarum 775 chromosome chromosome I, complete sequenceMicrocin-processing peptidase 26e-0652.8
NC_016816:1545354:1549725154972515511821458Pantoea ananatis LMG 5342, complete genomeantibiotic maturation peptidase9e-0652