Pre_GI: BLASTP Hits

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Query: NC_003143:4006884:4016048 Yersinia pestis CO92, complete genome

Start: 4016048, End: 4016830, Length: 783

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:1631052:164021616402161640998783Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-129460
NC_017154:3898925:390808939080893908871783Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-129460
NC_014029:3958811:396797539679753968757783Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-129460
NC_009381:222735:231890231890232672783Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-128457
NC_017265:4265659:427741042774104278192783Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein6e-128456
NC_009708:372422:3816133816133829261314Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein1e-106385
NC_006155:4302826:4314102431410243154151314Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-106385
NC_010634:4234932:4245199424519942465121314Yersinia pseudotuberculosis PB1/+, complete genomeImpA domain-containing protein1e-106385
NC_010465:429095:4382594382594395661308Yersinia pseudotuberculosis YPIII, complete genomeImpA domain protein5e-106384
NC_012962:293976:3007953007953021411347Photorhabdus asymbiotica, complete genomehypothetical protein1e-73276
NC_014228:4331327:4336814433681443382141401Xenorhabdus nematophila ATCC 19061, complete genomeConserved Hypothetical protein with ImpA domain (probable component of SST VI cluster)1e-70266
NC_013892:274297:2885842885842899751392Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-70266
NC_016902:3863932:3869646386964638709981353Escherichia coli KO11FL chromosome, complete genomeImpA domain-containing protein2e-59229
CP002185:234719:2409052409052422571353Escherichia coli W, complete genomeT6SS-associated protein2e-59229
CP002516:3863932:3869646386964638709981353Escherichia coli KO11, complete genomeImpA domain protein2e-59229
NC_016822:246715:2529252529252542771353Shigella sonnei 53G, complete genomehypothetical protein7e-59227
NC_011740:1991941:2008972200897220104771506Escherichia fergusonii ATCC 35469, complete genomehypothetical protein4e-58224
NC_011149:1077589:1093986109398610953471362Salmonella enterica subsp. enterica serovar Agona str. SL483,ImpA domain protein2e-56219
NC_011205:1186097:1206665120666512080291365Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ImpA domain-containing protein2e-56219
NC_011274:1094379:1114918111491811165491632Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-56219
NC_016831:1905289:1908761190876119101551395Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-56219
NC_011294:1085447:1106007110600711073981392Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-56219
NC_008570:2014151:2017683201768320191131431Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeImpA domain protein7e-48190
NC_013421:1173051:1176722117672211781581437Pectobacterium wasabiae WPP163, complete genomeImpA domain protein4e-47188
NC_011149:1077589:1090415109041510916501236Salmonella enterica subsp. enterica serovar Agona str. SL483,ImpA domain protein3e-40165
NC_012962:4427000:4429950442995044313201371Photorhabdus asymbiotica, complete genomehypothetical protein5e-40164
NC_010465:2820500:2838599283859928399661368Yersinia pseudotuberculosis YPIII, complete genomeImpA domain protein5e-40164
NC_008149:2773139:2793768279376827951351368Yersinia pestis Nepal516, complete genomehypothetical protein1e-39163
NC_004088:2937077:2957706295770629590731368Yersinia pestis KIM, complete genomehypothetical protein1e-39163
NC_009381:1655731:1675037167503716764041368Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-39163
NC_014029:1760948:1763066176306617644331368Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-39163
NC_017168:3948514:3969143396914339705101368Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-39163
NC_017265:2557476:2578105257810525794721368Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-39163
NC_009708:2788855:2808154280815428095211368Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein2e-39162
NC_006155:1807902:1807902180790218092691368Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-38160
NC_016514:1627664:1639808163980816411991392Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein9e-37153
NC_013961:3269368:3291637329163732930371401Erwinia amylovora, complete genomeCOG3515: Uncharacterized protein conserved in bacteria ImpA-related N-terminal domain2e-34146
NC_013971:465318:4783454783454797451401Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-34146
NC_014107:171170:190533190533191132600Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,hypothetical protein2e-34145
NC_009436:3117661:3147681314768131490961416Enterobacter sp. 638, complete genomeImpA domain-containing protein4e-34145
NC_015968:4117835:4134482413448241358761395Enterobacter asburiae LF7a chromosome, complete genomeImpA domain-containing protein5e-34144
NC_017060:125480:1574611574611588551395Rahnella aquatilis HX2 plasmid PRA1, complete sequenceImpA domain-containing protein2e-31136
NC_014121:1822895:1844710184471018460261317Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasL1e-30133
NC_011283:2103500:2123207212320721245921386Klebsiella pneumoniae 342 chromosome, complete genomeImpA domain-containing protein1e-28126
NC_014837:3766426:3785432378543237864751044Pantoea sp. At-9b chromosome, complete genomeImpA domain-containing protein3e-27122
NC_011748:3360967:3396575339657533979421368Escherichia coli 55989, complete genomehypothetical protein2e-27122
CU928145:3360967:3396575339657533979421368Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-27122
NC_011742:3057444:3062907306290730642831377Escherichia coli S88 chromosome, complete genomehypothetical protein3e-24112
NC_007946:3125577:3131040313104031324161377Escherichia coli UTI89, complete genomehypothetical protein3e-24112
NC_008253:2965573:2971228297122829726041377Escherichia coli 536, complete genomehypothetical protein5e-24111
NC_014121:1822895:1838342183834218399401599Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasJ4e-1479
NC_009381:1682000:1682016168201616836171602Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-1168.2
NC_009708:2788855:2815051281505128166521602Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein6e-1168.2
NC_010465:2820500:2845578284557828471791602Yersinia pseudotuberculosis YPIII, complete genometype VI secretion-associated protein, VC_A0119 family7e-1167.8
NC_009436:3117661:3152243315224331546182376Enterobacter sp. 638, complete genomeImpA domain-containing protein2e-1066.6
NC_012731:2302974:2321926232192623235241599Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-1065.9
NC_009648:1487692:1508599150859915101971599Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-1065.5
NC_017060:125480:1543521543521559561605Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion-associated protein1e-0963.5
NC_008563:3119284:3139452313945231410891638Escherichia coli APEC O1, complete genomehypothetical protein1e-0963.5
NC_015963:117178:1209411209411220561116Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencehypothetical protein4e-0962
NC_016612:28451:5557555575571491575Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein9e-0960.8
NC_010501:3575726:3578580357858035801661587Pseudomonas putida W619, complete genometype VI secretion-associated protein, VC_A0119 family1e-0860.1
NC_014310:811977:8334578334578344671011Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein4e-0858.5
NC_012962:4427000:4435406443540644370071602Photorhabdus asymbiotica, complete genomehypothetical protein5e-0858.5
NC_012721:1395417:1397244139724413988301587Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein9e-0857.4
NC_013956:4579759:4578161457816145797621602Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-0757
NC_003296:941920:9571539571539581661014Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-0756.6
NC_010552:592154:6109656109656125481584Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion-associated protein, VC_A0119 family2e-0756.6
NC_007348:2011957:2029244202924420308181575Ralstonia eutropha JMP134 chromosome 2, complete sequenceImpA, N-terminal3e-0755.5
NC_014837:3766426:3790283379028337918601578Pantoea sp. At-9b chromosome, complete genometype VI secretion-associated protein7e-0754.3
NC_010084:3173757:3196547319654731976681122Burkholderia multivorans ATCC 17616 chromosome 1, completeImpA family type VI secretion-associated protein1e-0653.5
NC_010804:324396:3271043271043282251122Burkholderia multivorans ATCC 17616 chromosome 1, completehypothetical protein1e-0653.5
NC_007517:306508:3065083065083088802373Geobacter metallireducens GS-15, complete genomeImpA-like5e-0652