Pre_GI: BLASTP Hits

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Query: NC_003143:2258636:2274727 Yersinia pestis CO92, complete genome

Start: 2274727, End: 2275818, Length: 1092

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017154:2258228:2274317227431722754081092Yersinia pestis D106004 chromosome, complete genomehypothetical protein0721
NC_004088:2541033:2541033254103325421241092Yersinia pestis KIM, complete genomehypothetical protein0721
NC_008150:1543635:1559725155972515608161092Yersinia pestis Antiqua, complete genomehypothetical protein0721
NC_008149:1669921:1686012168601216871031092Yersinia pestis Nepal516, complete genomehypothetical protein0721
NC_006155:2334122:2350202235020223512931092Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein0721
NC_005810:2043730:2059822205982220609131092Yersinia pestis biovar Microtus str. 91001, complete genomealpha/beta fold family hydrolase0721
NC_010634:2252329:2268409226840922695001092Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein0721
NC_014029:2335021:2335021233502123361121092Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0721
NC_010465:2428620:2428620242862024297111092Yersinia pseudotuberculosis YPIII, complete genomehydrolases of the alpha/beta superfamily0720
NC_009708:2392640:239264023926402393629990Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein0654
NC_015224:1440283:1440283144028314413321050Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-157554
NC_014840:76232:8913489134901831050Pantoea sp. At-9b plasmid pPAT9B03, complete sequencepeptidase S152e-155548
NC_007760:3655433:3666974366697436680321059Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein1e-153543
NC_020409:1173796:1195535119553511965931059Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeHydrolase of the alpha/beta superfamily-like protein1e-153543
NC_008800:3279468:329509732950973296053957Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein8e-153540
NC_014307:1855356:1876650187665018777111062Ralstonia solanacearum CFBP2957 chromosome, complete genomehydrolase3e-151534
NC_021066:1712905:1746106174610617471551050Raoultella ornithinolytica B6, complete genomehypothetical protein6e-151533
NC_008687:388262:410491410491411477987Paracoccus denitrificans PD1222 chromosome 2, complete sequencehypothetical protein2e-133475
NC_013192:1504310:151013615101361511128993Leptotrichia buccalis DSM 1135, complete genomealpha/beta hydrolase fold protein1e-125449
NC_011769:3712497:3717737371773737187921056Desulfovibrio vulgaris str. 'Miyazaki F', complete genomehypothetical protein2e-124446
NC_013592:2968500:2980141298014129812651125Dickeya dadantii Ech586, complete genomedienelactone hydrolase6e-58224
NC_009092:2282437:228832522883252289239915Shewanella loihica PV-4, complete genomehypothetical protein6e-44178
NC_013446:2919005:293849129384912939408918Comamonas testosteroni CNB-2, complete genomealpha/beta hydrolase fold protein5e-43175
NC_009380:3384737:339131033913103392248939Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein3e-41169
NC_010814:1441327:1483465148346514845051041Geobacter lovleyi SZ, complete genomemembrane protein3e-40166
NC_009634:299327:324166324166325128963Methanococcus vannielii SB chromosome, complete genomemembrane protein7e-40164
NC_004578:1719849:1740493174049317415211029Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-39162
NC_017195:2498113:2503489250348925046131125Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completealpha/beta hydrolase superfamily protein8e-39161
NC_016047:637778:6478766478766490031128Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completealpha/beta hydrolase superfamily protein8e-39161
NC_007005:4515853:4515853451585345168811029Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein7e-39161
NC_012796:129500:1321861321861332351050Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-38160
NC_007355:923218:925681925681926673993Methanosarcina barkeri str. fusaro chromosome 1, complete sequencemembrane protein1e-38160
NC_016830:3697173:3723317372331737243451029Pseudomonas fluorescens F113 chromosome, complete genomeDienelactone hydrolase-related enzyme2e-38160
NC_015379:2505233:2537426253742625384541029Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Conserved hypothetical protein; putative exported protein1e-37157
NC_010322:3315024:3331093333109333321211029Pseudomonas putida GB-1 chromosome, complete genomedienelactone hydrolase5e-37155
NC_012691:2097287:2114773211477321158791107Tolumonas auensis DSM 9187, complete genomepeptidase S155e-37155
NC_003552:484000:499831499831500814984Methanosarcina acetivorans C2A, complete genomemembrane protein6e-37155
NC_004663:1409462:1409462140946214110691608Bacteroides thetaiotaomicron VPI-5482, complete genomeconserved hypothetical protein, with a carboxymuconolactone decarboxylase domain2e-36153
NC_009637:1421885:142188514218851422874990Methanococcus maripaludis C7 chromosome, complete genomemembrane protein2e-36153
NC_010625:1465603:1481899148189914829091011Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein3e-36152
NC_003295:199354:2290102290102300381029Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL SIGNAL PEPTIDE PROTEIN6e-36151
NC_008027:2909000:291051329105132911412900Pseudomonas entomophila L48, complete genomehydrolase, alpha/beta fold family1e-35150
NC_014258:355845:3723353723353734171083Pantoea vagans C9-1 plasmid pPag3, complete sequencehypothetical protein1e-35150
NC_015663:3742738:3745905374590537469331029Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative signal peptide protein1e-34147
NC_003909:1205605:122231512223151223232918Bacillus cereus ATCC 10987, complete genomehypothetical protein5e-34145
NC_020181:1653261:1673660167366016746881029Enterobacter aerogenes EA1509E, complete genomeDienelactone hydrolase and related enzymes7e-34144
NC_005363:3562205:3568620356862035696691050Bdellovibrio bacteriovorus HD100, complete genomealpha/beta hydrolase superfamily protein1e-33144
NC_016609:6022778:6033051603305160340821032Niastella koreensis GR20-10 chromosome, complete genomepeptidase S154e-33142
NC_002516:2436304:2439150243915024402531104Pseudomonas aeruginosa PAO1, complete genomehypothetical protein7e-33141
NC_014640:3808639:382511738251173826037921Achromobacter xylosoxidans A8 chromosome, complete genomealpha/beta superfamily hydrolase7e-33141
NC_009648:1882500:1887456188745618885531098Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein6e-33141
NC_016845:2655512:2663056266305626641531098Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein6e-33141
NC_008027:2909000:291145629114562912394939Pseudomonas entomophila L48, complete genomehydrolase, alpha/beta fold family4e-32139
NC_013132:3081806:310316731031673104084918Chitinophaga pinensis DSM 2588, complete genomedienelactone hydrolase domain protein4e-32139
NC_018581:3323500:333300333330033333944942Gordonia sp. KTR9 chromosome, complete genomeHydrolase, alpha/beta superfamily2e-31137
NC_004431:364000:390151390151391071921Escherichia coli CFT073, complete genomeHypothetical protein ycjY1e-31137
NC_008253:334467:382321382321383241921Escherichia coli 536, complete genomehypothetical protein YcjY1e-31137
NC_010498:301000:331476331476332396921Escherichia coli SMS-3-5, complete genomehypothetical protein1e-31137
NC_008563:318993:327213327213328133921Escherichia coli APEC O1, complete genomehypothetical protein1e-31137
NC_007946:289425:325623325623326543921Escherichia coli UTI89, complete genomehypothetical protein YcjY1e-31137
NC_011742:291237:314988314988315908921Escherichia coli S88 chromosome, complete genomehypothetical protein1e-31137
NC_005966:1832066:184192418419241842838915Acinetobacter sp. ADP1, complete genomeconserved hypothetical protein; putative hydrolase of the alpha/beta superfamily3e-31136
NC_002488:1638946:1664020166402016650361017Xylella fastidiosa 9a5c, complete genomehypothetical protein3e-31136
NC_002488:1638946:1668885166888516699281044Xylella fastidiosa 9a5c, complete genomehypothetical protein2e-31136
NC_011751:348000:358768358768359688921Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-31136
NC_011601:273430:285466285466286386921Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehydrolases2e-31136
NC_013941:378555:388473388473389393921Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-31135
NC_012997:2367400:2378567237856723796521086Teredinibacter turnerae T7901, complete genomemembrane protein1e-30134
NC_016628:133841:1465661465661476751110Vibrio furnissii NCTC 11218 chromosome 2, complete sequencehypothetical protein8e-31134
NC_020126:2262049:227634622763462277272927Myxococcus stipitatus DSM 14675, complete genomehypothetical protein7e-31134
NC_013446:2919005:293944029394402940366927Comamonas testosteroni CNB-2, complete genomealpha/beta superfamily hydrolase5e-30132
NC_012731:2261787:2274175227417522753111137Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-30132
NC_015385:2050648:2081851208185120829181068Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein7e-30131
NC_013730:2359939:2361075236107523621931119Spirosoma linguale DSM 74, complete genomepeptidase S151e-29130
NC_015675:2247960:2268462226846222695561095Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein5e-29129
NC_011353:305820:3314743314743326101137Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehydrolase of the alpha/beta family protein2e-28127
NC_002695:301939:3275943275943287301137Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-28127
NC_013740:1081454:1082535108253510836231089Acidaminococcus fermentans DSM 20731, complete genomehydrolase of the alpha/beta superfamily3e-26119
NC_013850:2357608:2378152237815223791951044Klebsiella variicola At-22 chromosome, complete genomeconserved hypothetical signal peptide protein2e-25117
NC_014376:1217000:121700912170091217983975Clostridium saccharolyticum WM1 chromosome, complete genomealpha/beta family hydrolase2e-25117
NC_009092:2282437:228931322893132290248936Shewanella loihica PV-4, complete genomeputative dienelactone hydrolase-related enzyme2e-24113
NC_008687:388262:400725400725401084360Paracoccus denitrificans PD1222 chromosome 2, complete sequencehypothetical protein3e-23109
NC_011742:1574036:159059615905961590853258Escherichia coli S88 chromosome, complete genomehypothetical protein8e-22104
NC_007946:1632025:165257716525771652834258Escherichia coli UTI89, complete genomehypothetical protein8e-22104
NC_010529:23775:439854398544878894Cupriavidus taiwanensis plasmid pRALTA, complete sequenceputative hydrolase6e-1685.1
NC_013592:1602242:162231416223141623210897Dickeya dadantii Ech586, complete genomepeptidase S151e-0757.8
NC_002944:1881405:188755118875511888456906Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein1e-0654.3
NC_008392:1029134:108044010804401081327888Burkholderia cepacia AMMD chromosome 3, complete sequencepeptidase S151e-0654.3
NC_016023:579000:584104584104584997894Bacillus coagulans 36D1 chromosome, complete genomeputative alpha/beta hydrolase superfamily protein4e-0652.8