Pre_GI: BLASTP Hits

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Query: NC_003143:2258636:2271149 Yersinia pestis CO92, complete genome

Start: 2271149, End: 2271619, Length: 471

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2263347:226619022661902266660471Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein7e-68255
NC_005810:2043730:205624420562442056714471Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein7e-68255
NC_006155:2334122:234662423466242347094471Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein7e-68255
NC_008150:1543635:155614715561471556617471Yersinia pestis Antiqua, complete genomehypothetical protein7e-68255
NC_008149:1669921:168243416824341682904471Yersinia pestis Nepal516, complete genomehypothetical protein7e-68255
NC_010634:2252329:226483122648312265301471Yersinia pseudotuberculosis PB1/+, complete genomecupin 2 domain-containing protein7e-68255
NC_004088:2541033:254523225452322545702471Yersinia pestis KIM, complete genomehypothetical protein7e-68255
NC_009381:1258396:126182612618261262296471Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein7e-68255
NC_009708:2392640:239683923968392397309471Yersinia pseudotuberculosis IP 31758 chromosome, complete genomecupin domain-containing protein7e-68255
NC_014029:2335021:233922023392202339690471Yersinia pestis Z176003 chromosome, complete genomehypothetical protein7e-68255
NC_017154:2258228:227073922707392271209471Yersinia pestis D106004 chromosome, complete genomehypothetical protein7e-68255
NC_010465:2428620:243281924328192433289471Yersinia pseudotuberculosis YPIII, complete genomeCupin 2 conserved barrel domain protein5e-67252
NC_020409:1173796:119435211943521194843492Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCupin 2, conserved barrel domain protein4e-42169
NC_012917:3241196:329035532903553290831477Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeCupin 2 conserved barrel domain protein7e-40162
NC_020064:1150982:116139311613931161866474Serratia marcescens FGI94, complete genomehypothetical protein8e-40162
NC_011892:77975:802158021580688474Methylobacterium nodulans ORS 2060 plasmid pMNOD01, completeCupin 2 conserved barrel domain protein2e-38157
NC_014539:743523:759859759859760266408Burkholderia sp. CCGE1003 chromosome 1, complete sequencecupin3e-38157
NC_011145:3750021:377981737798173780230414Anaeromyxobacter sp. K, complete genomeCupin 2 conserved barrel domain protein5e-37153
NC_010694:1966676:196667619666761967074399Erwinia tasmaniensis, complete genomehypothetical protein4e-37153
NC_011757:1146608:115156411515641152058495Methylobacterium chloromethanicum CM4, complete genomeCupin 2 conserved barrel domain protein4e-37153
NC_010628:675445:690320690320690721402Nostoc punctiforme PCC 73102, complete genomeCupin 2, conserved barrel domain protein4e-36150
NC_011769:3712497:371709437170943717591498Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeCupin 2 conserved barrel domain protein2e-35147
NC_004578:3193490:322493132249313225332402Pseudomonas syringae pv. tomato str. DC3000, complete genomecupin family protein5e-35146
NC_010086:1907959:191576019157601916170411Burkholderia multivorans ATCC 17616 chromosome 2, completeCupin 2 conserved barrel domain protein7e-34142
NC_010805:530876:559134559134559544411Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein7e-34142
NC_009255:1071868:109751510975151097925411Burkholderia vietnamiensis G4 chromosome 2, complete sequencecupin7e-34142
NC_015675:2247960:227011422701142270509396Mesorhizobium opportunistum WSM2075 chromosome, complete genomeCupin 2 barrel domain-containing protein3e-32137
NC_008010:222516:224750224750225157408Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceCupin 2, conserved barrel3e-32137
NC_007760:3655433:3665393366539336666041212Anaeromyxobacter dehalogenans 2CP-C, complete genomeCarboxymuconolactone decarboxylase3e-32137
NC_012796:129500:134678134678135079402Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-31134
NC_012997:2367400:237988523798852380283399Teredinibacter turnerae T7901, complete genomecupin 2, conserved barrel domain protein5e-31133
NC_021066:1712905:175138017513801751859480Raoultella ornithinolytica B6, complete genomecupin region precursor7e-31132
NC_014307:1855356:187789718778971878553657Ralstonia solanacearum CFBP2957 chromosome, complete genome1e-29129
NC_013730:2359939:236227823622782362673396Spirosoma linguale DSM 74, complete genomeCupin 2 conserved barrel domain protein2e-29128
NC_014840:76232:925569255693023468Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceCupin 2 barrel domain-containing protein3e-29127
NC_013850:2357608:237465223746522375110459Klebsiella variicola At-22 chromosome, complete genomeCupin 2 conserved barrel domain protein4e-28123
NC_011886:2369980:237579323757932376224432Arthrobacter chlorophenolicus A6, complete genomeCupin 2 conserved barrel domain protein1e-25115
NC_012225:316000:316089316089316535447Brachyspira hyodysenteriae WA1, complete genomehypothetical protein9e-25112
NC_016628:133841:145950145950146441492Vibrio furnissii NCTC 11218 chromosome 2, complete sequencecupin domain protein1e-23108
NC_016609:6022778:603264160326416033054414Niastella koreensis GR20-10 chromosome, complete genomecupin1e-21102
NC_015514:477935:494195494195494593399Cellulomonas fimi ATCC 484 chromosome, complete genomeCupin 2 barrel domain-containing protein7e-2199.4
NC_014209:1392115:139590813959081396348441Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Cupin 2 conserved barrel domain protein8e-2095.9
NC_014209:787535:798031798031798471441Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,Cupin 2 conserved barrel domain protein9e-2095.9
NC_013921:755800:770436770436770876441Thermoanaerobacter italicus Ab9 chromosome, complete genomeCupin 2 conserved barrel domain protein9e-2095.9
NC_014964:1608575:162007216200721620512441Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeCupin 2 barrel domain-containing protein2e-1994.7
NC_010321:1616362:162785916278591628299441Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completecupin2e-1994.7
NC_015761:1630000:1650240165024016513191080Salmonella bongori NCTC 12419, complete genomehypothetical protein3e-1994
NC_003552:484000:497069497069497494426Methanosarcina acetivorans C2A, complete genomehypothetical protein8e-1992.4
NC_013592:2338403:235320623532062353613408Dickeya dadantii Ech586, complete genomeCupin 2 conserved barrel domain protein1e-1892
NC_013192:1504310:151481215148121515129318Leptotrichia buccalis DSM 1135, complete genome1e-1892
NC_016612:5208936:522467852246785225085408Klebsiella oxytoca KCTC 1686 chromosome, complete genomecupin2e-1891.7
NC_007355:923218:938251938251938676426Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein6e-1889.7
NC_018720:2097694:210024021002402101004765Bifidobacterium asteroides PRL2011 chromosome, complete genomecarboxymuconolactone decarboxylase4e-1787
NC_020054:3132478:313757731375773138071495Fibrella aestuarina BUZ 2 drat genomecupin 2 conserved barrel domain protein4e-1787
NC_009634:299327:326319326319326744426Methanococcus vannielii SB chromosome, complete genomecupin 2 domain-containing protein4e-1787
NC_013592:3212834:324429632442963244703408Dickeya dadantii Ech586, complete genomehypothetical protein5e-1786.7
NC_007355:923218:933701933701934123423Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein1e-1685.5
NC_003552:484000:484776484776485201426Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-1684.3
NC_012632:2352784:235764023576402358152513Sulfolobus islandicus M.16.27 chromosome, complete genomecupin5e-1683.6
NC_012588:2249874:225442622544262254938513Sulfolobus islandicus M.14.25 chromosome, complete genomecupin8e-1682.8
NC_012726:2249831:225468722546872255199513Sulfolobus islandicus M.16.4 chromosome, complete genomecupin 2, conserved barrel domain protein8e-1682.8
NC_009615:1446132:144828214482821448800519Parabacteroides distasonis ATCC 8503 chromosome, complete genome4-carboxymuconolactone decarboxylase7e-1682.8
NC_009637:1421885:142291114229111423336426Methanococcus maripaludis C7 chromosome, complete genomecupin 2 domain-containing protein1e-1582
NC_003228:2473956:248917524891752490008834Bacteroides fragilis NCTC 9343, complete genomepossible carboxymuconolactone decarboxylase1e-1479
NC_015385:2050648:205657820565782057009432Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein2e-1478.2
NC_016776:2549465:256396825639682564801834Bacteroides fragilis 638R, complete genomecarboxymuconolactone decarboxylase3e-1477.8
NC_014364:4488875:451673345167334517167435Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCupin 2 conserved barrel domain protein2e-1375.1
NC_014371:1358615:604260426830789Prevotella melaninogenica ATCC 25845 chromosome chromosome II,carboxymuconolactone decarboxylase family protein2e-1375.1
NC_014217:3024961:302902630290263029406381Starkeya novella DSM 506 chromosome, complete genomeCupin 2 conserved barrel domain protein3e-1374.3
NC_012589:2379709:238576323857632386194432Sulfolobus islandicus L.S.2.15, complete genomehypothetical protein2e-1374.3
NC_013769:2363980:236883523688352369266432Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein2e-1374.3
NC_012622:2319598:232558823255882326019432Sulfolobus islandicus Y.G.57.14 chromosome, complete genomehypothetical protein2e-1374.3
NC_017195:2498113:251005025100502510454405Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completehypothetical protein1e-1272.4
NC_012778:207415:216213216213216779567Eubacterium eligens ATCC 27750, complete genomehypothetical protein4e-1270.5
NC_015759:760671:772879772879773286408Weissella koreensis KACC 15510 chromosome, complete genomedouble-stranded beta-helix-like protein6e-1166.2
NC_008278:925231:935345935345935701357Frankia alni ACN14a, complete genomehypothetical protein4e-1063.5
NC_008800:3279468:329863132986313298987357Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein7e-1062.8
NC_019744:20500:305163051630818303Cylindrospermum stagnale PCC 7417 plasmid pCYLST.02, complete9e-0752.8
NC_015674:1562968:156313715631371563442306Helicobacter bizzozeronii CIII-1, complete genomehypothetical protein4e-0650.4