Pre_GI: BLASTP Hits

Some Help

Query: NC_003143:2258636:2264507 Yersinia pestis CO92, complete genome

Start: 2264507, End: 2265166, Length: 660

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2263347:227264322726432273302660Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-129459
NC_010465:2428620:243926024392602439919660Yersinia pseudotuberculosis YPIII, complete genomeMethyltransferase type 124e-129459
NC_008149:1669921:167579216757921676451660Yersinia pestis Nepal516, complete genomehypothetical protein4e-129459
NC_004088:2541033:255168525516852552344660Yersinia pestis KIM, complete genomehypothetical protein4e-129459
NC_008150:1543635:154950615495061550165660Yersinia pestis Antiqua, complete genomehypothetical protein4e-129459
NC_005810:2043730:204960220496022050261660Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-129459
NC_010634:2252329:225820022582002258859660Yersinia pseudotuberculosis PB1/+, complete genomemethyltransferase type 124e-129459
NC_006155:2334122:233999323399932340652660Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-129459
NC_009381:1258396:126827912682791268938660Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-129459
NC_009708:2392640:240329324032932403952660Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein4e-129459
NC_014029:2335021:234567323456732346332660Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-129459
NC_017154:2258228:226409822640982264757660Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-129459
NC_008258:2045000:205422420542242054880657Shigella flexneri 5 str. 8401, complete genomeunknown protein encoded within prophage5e-75280
NC_013361:649518:657958657958658614657Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-75280
AP010958:604719:614126614126614794669Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative methylase5e-75280
NC_011415:644811:654364654364655032669Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-75280
NC_013353:604719:614126614126614794669Escherichia coli O103:H2 str. 12009, complete genomemethylase5e-75280
NC_004337:2035945:204554920455492046217669Shigella flexneri 2a str. 301, complete genomehypothetical protein4e-75280
NC_017328:2090679:210114621011462101814669Shigella flexneri 2002017 chromosome, complete genomehypothetical protein4e-75280
NC_004431:1352906:137182913718291372494666Escherichia coli CFT073, complete genomeHypothetical protein ybcY precursor2e-74278
NC_013941:733286:740900740900741568669Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-74277
NC_015761:1599000:161191316119131612575663Salmonella bongori NCTC 12419, complete genomehypothetical protein1e-71269
NC_011149:1429523:147760014776001478310711Salmonella enterica subsp. enterica serovar Agona str. SL483,methyltransferase type 125e-71267
NC_011080:1709612:172519517251951725905711Salmonella enterica subsp. enterica serovar Newport str. SL254,methyltransferase type 125e-71267
NC_016810:1670112:168574316857431686405663Salmonella enterica subsp. enterica serovar Typhimurium strmethyltransferase4e-71267
NC_016856:1723236:173886717388671739529663Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative SAM-dependent methyltransferase4e-71267
NC_016860:1710950:172658117265811727243663Salmonella enterica subsp. enterica serovar Typhimurium strmethyltransferase4e-71267
NC_017046:1669995:168562616856261686288663Salmonella enterica subsp. enterica serovar Typhimurium str. 798methyltransferase4e-71267
NC_011094:1683979:169963016996301700292663Salmonella enterica subsp. enterica serovar Schwarzengrund strtype 12 methyltransferase3e-71267
NC_011083:1761352:177699217769921777654663Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,methyltransferase type 127e-71266
NC_006905:1726416:174204617420461742708663Salmonella enterica subsp. enterica serovar Choleraesuis strputative SAM-dependent methyltransferase6e-71266
NC_011205:1633353:163905516390551639717663Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853methyltransferase type 126e-71266
NC_011294:1493849:149953314995331500195663Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein6e-71266
NC_012125:2143246:214893021489302149592663Salmonella enterica subsp. enterica serovar Paratyphi C strainSAM-dependent methyltransferase6e-71266
NC_016832:1582273:159332815933281593990663Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein6e-71266
NC_010067:1300606:130630413063041306966663Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-70265
NC_016831:1468691:148432514843251484987663Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-69262
NC_011274:1544653:155033715503371550999663Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-69262
NC_015224:2701914:271929227192922719948657Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,SAM-dependent methyltransferase4e-66250
NC_006625:1:9505950510158654Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceunknown protein encoded within prophage3e-65248
NC_012731:3411161:344695834469583447611654Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein4e-65247
NC_011751:1377457:139715313971531397737585Escherichia coli UMN026 chromosome, complete genomeputative AdoMet-dependent methyltransferase; DLP12 prophage1e-63242
NC_011742:585908:604835604835605419585Escherichia coli S88 chromosome, complete genomeAdoMet-dependent methyltransferase; DLP12 prophage1e-63242
AC_000091:558920:581375581375581959585Escherichia coli W3110 DNA, complete genomepredicted SAM-dependent methyltransferase1e-62239
NC_000913:558920:581375581375581959585Escherichia coli K12, complete genomeDLP12 prophage; predicted SAM-dependent methyltransferase1e-62239
NC_020418:1397112:140828514082851408944660Morganella morganii subsp. morganii KT, complete genomePutative SAM-dependent methyltransferase5e-62237
NC_006625:1:3643641071708Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequenceunknown protein encoded within prophage6e-61233
NC_016857:1670112:168588716858871686405519Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74type 12 methyltransferase6e-53207
NC_010102:1388344:139401313940131394531519Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-53206
NC_016863:1671428:168728416872841687721438Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative SAM-dependent methyltransferase2e-42172
NC_003197:1713259:172911517291151729552438Salmonella typhimurium LT2, complete genomeputative SAM-dependent methyltransferase2e-42172
NC_004631:1587000:159660315966031597040438Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-42171
NC_003198:1378457:138414113841411384578438Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein3e-42171
NC_007613:1038000:104627910462791046710432Shigella boydii Sb227, complete genomehypothetical protein1e-40166
NC_011894:2385834:239177123917712392445675Methylobacterium nodulans ORS 2060, complete genomeMethyltransferase type 123e-36151
NC_011894:5056901:506743450674345068108675Methylobacterium nodulans ORS 2060, complete genomeMethyltransferase type 122e-35149
NC_013440:1480855:149997414999741500627654Haliangium ochraceum DSM 14365, complete genomeMethyltransferase type 122e-23109
NC_018524:4564493:456923345692334569955723Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein8e-1890.5