Pre_GI: BLASTP Hits

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Query: NC_003143:1973867:1987729 Yersinia pestis CO92, complete genome

Start: 1987729, End: 1988328, Length: 600

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:2652825:266171426617142662313600Yersinia pestis Nepal516, complete genomehypothetical protein2e-109394
NC_010159:1710268:171913517191351719734600Yersinia pestis Angola, complete genomeantimicrobial peptide resistance and lipid A acylation protein PagP2e-108390
NC_008800:1942000:195477819547781955392615Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,palmitoyl transferase8e-80296
NC_016612:5231065:523512452351245235699576Klebsiella oxytoca KCTC 1686 chromosome, complete genomephospholipid:lipid A palmitoyltransferase2e-37155
NC_014258:355845:358511358511359083573Pantoea vagans C9-1 plasmid pPag3, complete sequenceprotein CrcA2e-35148
NC_013850:2182337:224538422453842245959576Klebsiella variicola At-22 chromosome, complete genomeAntimicrobial peptide resistance and lipid A acylation PagP3e-35148
NC_014121:4577324:458944745894474590088642Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative antimicrobial peptide resistance and lipid A acylation protein PagP4e-33140
NC_012779:2856051:288322928832292883495267Edwardsiella ictaluri 93-146, complete genomeprotein CrcA1e-1995.9