Pre_GI: BLASTP Hits

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Query: NC_003143:1630000:1632251 Yersinia pestis CO92, complete genome

Start: 1632251, End: 1632697, Length: 447

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a recent Orientalis subtype isolated in the USA from a patient who died of pneumonic plague after acquiring the disease from an infected cat. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008149:2802392:285106228510622851508447Yersinia pestis Nepal516, complete genomemembrane protein3e-58223
NC_014618:2989000:300918130091813009627447Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein3e-46183
NC_012880:3125261:314809031480903148536447Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF3072e-45181
NC_006511:1808815:183201318320131832459447Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-44178
NC_016812:4246542:425948542594854259970486Sinorhizobium fredii HH103, complete genomehypothetical protein1e-1788.6
NC_013757:1544348:157982115798211580261441Geodermatophilus obscurus DSM 43160, complete genomeprotein of unknown function DUF3072e-1477.8
NC_008319:1601494:160578816057881606198411Synechococcus sp. CC9311, complete genomehypothetical protein4e-1477
NC_017219:1830353:183431018343101834735426Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-1374.7
NC_017218:1166844:117080111708011171226426Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein2e-1374.3
NC_011593:1830500:183458018345801834945366Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein3e-1374.3
NC_015684:362236:386143386143386547405Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein5e-1373.2
NC_011386:136223:142162142162142566405Oligotropha carboxidovorans OM5, complete genomehypothetical protein5e-1373.2
NC_009445:467682:495463495463495852390Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein2e-1271.6
NC_013510:2288746:228874622887462289135390Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF3075e-1270.1
NC_009901:2272206:229176722917672292174408Shewanella pealeana ATCC 700345, complete genomeprotein of unknown function DUF3076e-1269.7
NC_014834:959986:993177993177993602426Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein7e-1269.3
NC_007958:830000:852742852742853146405Rhodopseudomonas palustris BisB5, complete genomeprotein of unknown function DUF3071e-1168.6
NC_010572:3363830:340855434085543408946393Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-1167.4
NC_008618:1704462:171667317166731717113441Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein6e-1166.2
NC_019673:526000:532133532133532492360Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-1064.3
NC_016109:3591401:365269136526913653092402Kitasatospora setae KM-6054, complete genomehypothetical protein3e-1063.9
NC_014387:3227875:323643432364343236808375Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein6e-1062.8
NC_015683:732668:752889752889753302414Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein2e-0961.6
NC_014550:2835696:283626828362682836678411Arthrobacter arilaitensis Re117, complete genomehypothetical protein2e-0961.2
NC_014659:1006500:101073910107391011143405Rhodococcus equi 103S, complete genomeintegral membrane protein3e-0960.8
NC_012470:1390285:139494713949471395312366Streptococcus equi subsp. zooepidemicus, complete genomemembrane protein6e-0959.7
NC_016111:3736254:374038737403873740779393Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-0858.2
NC_016109:3591401:365226036522603652580321Kitasatospora setae KM-6054, complete genomehypothetical protein4e-0857
NC_008262:784878:801988801988802350363Clostridium perfringens SM101, complete genomeDomain of unknown function (DUF307) family8e-0855.8
NC_003366:842000:857504857504857866363Clostridium perfringens str. 13, complete genomehypothetical protein2e-0754.7
NC_010163:63209:793687936879730363Acholeplasma laidlawii PG-8A chromosome, complete genomehypothetical protein2e-0754.3