Some Help

Query: NC_003078:578000 Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence

Start: 578000, End: 606924, Length: 28925

Host Lineage: Sinorhizobium meliloti; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Streptomycin resistant derivative of strain 2011. Plant symbiotic bacterium This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, in this case the alfalfa plant (Medicago sativa). Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012586:89714889714892110623959Rhizobium sp. NGR234 plasmid pNGR234b, complete sequence0678BLASTN svgBLASTP svg
NC_011988:1036618*1036618106496728350Agrobacterium vitis S4 chromosome 2, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_009952:52645652645655182825373Dinoroseobacter shibae DFL 12, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014034:152264*15226417763125368Rhodobacter capsulatus SB1003 chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014297:13367731336773135459917827Halalkalicoccus jeotgali B3 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012559:18880001888000191471626717Laribacter hongkongensis HLHK9, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007493:546000*54600056875722758Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence3e-0661.9BLASTN svgBLASTP svg