Pre_GI: BLASTP Hits

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Query: NC_003063:1128370:1149486 Agrobacterium tumefaciens str. C58 chromosome linear, complete

Start: 1149486, End: 1150337, Length: 852

Host Lineage: Agrobacterium fabrum; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain is a biovar 1 nopaline-producing strain originally isolated from a cherry tree tumor. Strains of Agrobacterium are classified in three biovars based on their utilisation of different carbohydrates and other biochemical tests. The differences between biovars are determined by genes on the single circle of chromosomal DNA. Biovar differences are not particularly relevant to the pathogenicity of A. tumefaciens, except in one respect: biovar 3 is found worldwide as the pathogen of gravevines. This species causes crown gall disease of a wide range of dicotyledonous (broad-leaved) plants, especially members of the rose family such as apple, pear, peach, cherry, almond, raspberry and roses. Because of the way that it infects other organisms, this bacterium has been used as a tool in plant breeding. Any desired genes, such as insecticidal toxin genes or herbicide-resistance genes, can be engineered into the bacterial DNA, and then inserted into the plant genome. This process shortens the conventional plant breeding process, and allows entirely new (non-plant) genes to be engineered into crops.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003305:922357:924419924419925270852Agrobacterium tumefaciens str. C58 chromosome linear, completetranscriptional regulator, LysR family1e-141502
NC_007511:2072838:209585220958522096709858Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-59228
NC_007948:517893:518352518352519215864Polaromonas sp. JS666, complete genometranscriptional regulator, LysR family9e-41167
NC_009654:91096:959369593696802867Marinomonas sp. MWYL1, complete genomeLysR family transcriptional regulator5e-34144
NC_012560:4201969:421861342186134219548936Azotobacter vinelandii DJ, complete genomeBacterial regulatory protein, LysR family4e-25115
NC_021150:4201965:421860942186094219544936Azotobacter vinelandii CA6, complete genomeLysR family regulatory protein4e-25115
NC_010725:750911:772714772714773592879Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family7e-24111
NC_012811:1105395:112754111275411128443903Methylobacterium extorquens AM1 megaplasmid, complete sequenceTranscriptional regulator, LysR family2e-23110
NC_006087:1334500:133839513383951339249855Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, LysR family7e-1994.7
NC_007963:2644930:267232126723212673205885Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family3e-1789.4
NC_015379:4282815:428503442850344285888855Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family7e-1788.2
NC_015422:1:130181301813860843Alicycliphilus denitrificans K601 chromosome, complete genomeLysR family transcriptional regulator7e-1787.8
NC_014640:6971000:697104369710436971975933Achromobacter xylosoxidans A8 chromosome, complete genometranscriptional regulator3e-1685.9
NC_013592:2968500:299491129949112995762852Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family3e-1685.9
NC_014838:175939:194068194068194949882Pantoea sp. At-9b plasmid pPAT9B01, complete sequencetranscriptional regulator, LysR family4e-1582.4
NC_006350:1084930:108493010849301085826897Burkholderia pseudomallei K96243 chromosome 1, complete sequenceLysR family transcriptional regulator5e-1581.6
NC_010508:2776283:280057828005782801465888Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family8e-1581.3
NC_010581:561579:580129580129581079951Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family1e-1480.9
NC_016622:82418:103229103229104170942Azospirillum lipoferum 4B, complete genomeLysR family transcriptional regulator2e-1479.7
NC_010694:891967:895780895780896682903Erwinia tasmaniensis, complete genomePutative transcriptional regulator protein, LysR family3e-1479.3
NC_007519:64157:803788037881283906Desulfovibrio alaskensis G20 chromosome, complete genomeLysR family transcriptional regulator3e-1479.3
NC_015424:2836920:283692028369202837774855Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator4e-1478.6
NC_020829:2022000:202767020276702028554885Pseudomonas denitrificans ATCC 13867, complete genometranscriptional regulator5e-1478.6
NC_010694:1324250:133909913390991340025927Erwinia tasmaniensis, complete genomeLysR-family transcriptional regulator2e-1377
NC_015224:3191000:320949632094963210428933Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator2e-1376.6
NC_008322:2637646:264124826412482642132885Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family2e-1376.3
NC_008321:2569315:257290825729082573792885Shewanella sp. MR-4, complete genometranscriptional regulator, LysR family2e-1376.3
NC_010159:1861465:188310218831021884031930Yersinia pestis Angola, complete genometranscriptional regulator LrhA4e-1375.5
NC_013971:2478676:248239124823912483320930Erwinia amylovora ATCC 49946 chromosome, complete genomeNADH dehydrogenase operon transcriptional regulator8e-1374.3
NC_013961:2441148:244486324448632445792930Erwinia amylovora, complete genomeprobable HTH-type transcriptional regulator lrhA8e-1374.3
NC_012214:1438476:145355614535561454485930Erwinia pyrifoliae Ep1/96, complete genomeLysR-family transcriptional regulator8e-1374.3
NC_003295:659837:662013662013662882870Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN9e-1374.3
NC_017265:1521276:152127615212761522208933Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,LysR-family transcriptional regulatory protein1e-1273.9
NC_008149:2411161:243283524328352433767933Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein1e-1273.9
NC_006155:3040769:306248730624873063419933Yersinia pseudotuberculosis IP 32953, complete genomeLysR-family transcriptional regulatory protein1e-1273.9
NC_003143:2849377:287102128710212871953933Yersinia pestis CO92, complete genomeLysR-family transcriptional regulatory protein1e-1273.9
NC_012660:4669500:468873846887384689601864Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator3e-1272.8
NC_015137:1207769:122387612238761224742867Burkholderia sp. CCGE1001 chromosome 2, complete sequenceLysR family transcriptional regulator3e-1272.4
NC_006512:2211654:223007222300722230914843Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, LysR family4e-1272
NC_015379:4282815:428725542872554288142888Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family4e-1272
NC_007511:719493:736224736224737078855Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family8e-1271.2
NC_020911:1353896:137193913719391372874936Octadecabacter antarcticus 307, complete genomeputative hydrogen peroxide-inducible genes activator OxyR1e-1170.5
NC_008061:428501:445939445939446790852Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-1168.9
NC_011145:3750021:378288837828883783829942Anaeromyxobacter sp. K, complete genometranscriptional regulator, LysR family4e-1168.9
NC_005810:2613456:263510026351002636044945Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator5e-1168.6
NC_019940:2893535:291169629116962912598903Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator4e-1168.6
NC_014650:2417509:242372524237252424627903Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator8e-1167.8
NC_019673:1420198:143785814378581438763906Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, LysR family1e-1067.4
NC_010515:2358134:237710923771092377960852Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-1067
NC_020063:3690308:373302537330253733897873Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator1e-1067
NC_010554:1871000:188943718894371890354918Proteus mirabilis HI4320, complete genomeLysR-family transcriptional regulator2e-1066.6
NC_009483:1636189:164002916400291640916888Geobacter uraniireducens Rf4 chromosome, complete genomeLysR family transcriptional regulator3e-1066.2
NC_010634:2960000:298038629803862981348963Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator3e-1066.2
NC_013446:2623528:264278126427812643671891Comamonas testosteroni CNB-2, complete genomeputative LysR-family transcriptional regulator3e-1065.9
NC_020209:945000:960556960556961392837Pseudomonas poae RE*1-1-14, complete genomeLysR family transcriptional regulator3e-1065.9
NC_015410:2838132:284148928414892842343855Pseudomonas mendocina NK-01 chromosome, complete genomeLysR family transcriptional regulator5e-1065.5
NC_009439:2337024:235478523547852355639855Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator5e-1065.1
NC_012779:2064582:2070273207027320712741002Edwardsiella ictaluri 93-146, complete genomeHTH-type transcriptional regulator PecT6e-1064.7
NC_014153:2187409:218740921874092188347939Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, LysR family7e-1064.7
NC_013203:472679:472679472679473620942Atopobium parvulum DSM 20469, complete genometranscriptional regulator, LysR family8e-1064.3
NC_008095:2031997:204256720425672043448882Myxococcus xanthus DK 1622, complete genometranscriptional regulator, LysR family2e-0963.2
NC_013592:3397304:341194634119463412842897Dickeya dadantii Ech586, complete genometranscriptional regulator, LysR family3e-0962.8
NC_007929:1805000:182164318216431822521879Lactobacillus salivarius subsp. salivarius UCC118, complete genomeTranscriptional Regulator, LysR substrate binding3e-0962.8
NC_010002:4287439:431379643137964314698903Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family5e-0962
NC_009667:1341000:135994713599471360798852Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceLysR family transcriptional regulator4e-0962
NC_006677:1431500:145210614521061453035930Gluconobacter oxydans 621H, complete genomeOxidative stress regulatory protein OxyR6e-0961.6
NC_012660:3320330:334445233444523345342891Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator6e-0961.6
NC_013850:4612812:462711546271154628053939Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family8e-0961.2
NC_015723:384000:384000384000384887888Cupriavidus necator N-1 chromosome 2, complete sequenceLysR family transcriptional regulator1e-0860.8
NC_014329:1328949:133749813374981338439942Corynebacterium pseudotuberculosis FRC41 chromosome, completeLysR family transcriptional regulator1e-0860.8
NC_016781:1327516:133731813373181338259942Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetranscriptional activator protein lysR1e-0860.8
NC_017300:1326331:133488013348801335821942Corynebacterium pseudotuberculosis 1002 chromosome, completeTranscriptional activator protein lysR1e-0860.8
NC_009511:2726296:273916127391612740096936Sphingomonas wittichii RW1 chromosome, complete genomeLysR family transcriptional regulator1e-0860.8
NC_015138:272500:282606282606283535930Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator1e-0860.8
NC_012560:1677798:169286916928691693768900Azotobacter vinelandii DJ, complete genomeTranscriptional regulator, LysR family9e-0960.8
NC_021150:1677811:169288216928821693781900Azotobacter vinelandii CA6, complete genomeTranscriptional regulator, LysR family9e-0960.8
NC_011283:4767269:478157247815724782510939Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator9e-0960.8
NC_011757:4445343:444986244498624450743882Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, LysR family1e-0860.5
NC_005810:3493607:351208835120883512969882Yersinia pestis biovar Microtus str. 91001, complete genometranscriptional regulator HdfR1e-0860.5
NC_014618:2705769:271885427188542719768915Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator1e-0860.5
CP002185:1727493:172749317274931728374882Escherichia coli W, complete genomepredicted DNA-binding transcriptional regulator1e-0860.5
NC_013521:2254534:226969922696992270571873Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator1e-0860.5
CP002516:2361628:237748123774812378362882Escherichia coli KO11, complete genometranscriptional regulator, LysR family1e-0860.5
NC_016902:2361628:237748123774812378362882Escherichia coli KO11FL chromosome, complete genomeLysR family transcriptional regulator1e-0860.5
NC_015276:855150:859769859769860695927Marinomonas mediterranea MMB-1 chromosome, complete genometranscriptional regulator, LysR family1e-0860.5
NC_011415:1715644:171564417156441716525882Escherichia coli SE11 chromosome, complete genomeputative transcriptional regulator1e-0860.5
NC_012914:5194791:520850852085085209395888Paenibacillus sp. JDR-2, complete genometranscriptional regulator, LysR family2e-0860.1
NC_010725:1419272:143411314341131435012900Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family2e-0860.1
NC_017195:517344:548563548563549453891Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeHTH-type transcriptional regulator GltC2e-0859.7
CP002207:2169277:218817021881702189069900Bacillus atrophaeus 1942, complete genomeputative HTH-type transcriptional regulator2e-0859.7
UCMB5137:2128500:215197521519752152874900Bacillus atrophaeus UCMB-5137putative HTH-type transcriptional regulator2e-0859.7
NC_014639:2169277:218817021881702189069900Bacillus atrophaeus 1942 chromosome, complete genomeHTH-type transcriptional regulator2e-0859.7
NC_014618:2139639:215062821506282151503876Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator2e-0859.7
NC_011761:2067695:207938020793802080306927Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeLysR family transcriptional regulator2e-0859.7
NC_013739:2057781:2076477207647720775081032Conexibacter woesei DSM 14684, complete genometranscriptional regulator, LysR family2e-0859.7
NC_016801:1422500:146943214694321470370939Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeLysR-family transcriptional regulator3e-0859.3
NC_015683:1467000:147576214757621476703942Corynebacterium ulcerans BR-AD22 chromosome, complete genomeLysR family transcription regulator3e-0859.3
NC_017317:1463466:147206214720621473003942Corynebacterium ulcerans 809 chromosome, complete genomeLysR-family transcription regulator3e-0859.3
NC_015850:1947000:199290219929021993777876Acidithiobacillus caldus SM-1 chromosome, complete genomeLysR family transcriptional regulator YeiE3e-0859.3
NC_015138:2025000:204546920454692046365897Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator3e-0859.3
NC_016932:1309644:132219213221921323133942Corynebacterium pseudotuberculosis 316 chromosome, complete genometranscriptional activator protein lysR3e-0859.3
NC_014323:625155:644592644592645491900Herbaspirillum seropedicae SmR1 chromosome, complete genomeLysR family transcription regulator protein4e-0858.9
NC_017031:1328500:133730513373051338246942Corynebacterium pseudotuberculosis P54B96 chromosome, completeTranscriptional activator protein lysR4e-0858.9
NC_017301:1328500:133718613371861338127942Corynebacterium pseudotuberculosis C231 chromosome, completeTranscriptional activator protein lysR4e-0858.9
NC_017303:1328777:133732713373271338268942Corynebacterium pseudotuberculosis I19 chromosome, complete genomeTranscriptional activator protein lysR4e-0858.9
NC_017305:1326351:133489713348971335838942Corynebacterium pseudotuberculosis PAT10 chromosome, completeTranscriptional activator protein lysR4e-0858.9
NC_013740:2218215:222678722267872227674888Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, LysR family3e-0858.9
NC_010725:3992948:401180540118054012767963Methylobacterium populi BJ001, complete genometranscriptional regulator, LysR family3e-0858.9
NC_016785:1357500:140579614057961406734939Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeLysR-family transcriptional regulator5e-0858.5
NC_010468:4455201:447266744726674473584918Escherichia coli ATCC 8739, complete genometranscriptional regulator, LysR family5e-0858.5
NC_010473:4256000:425621042562104257127918Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional dual regulator5e-0858.5
CU928160:4248621:424772142477214248638918Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional dual regulator5e-0858.5
NC_010508:1898547:191011119101111911004894Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencetranscriptional regulator, LysR family5e-0858.5
NC_016816:3952000:395940639594063960284879Pantoea ananatis LMG 5342, complete genomeLysR family transcriptional regulator5e-0858.5
CU928160:1625535:162553516255351626416882Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-0858.5
NC_010505:5035668:503634950363495037272924Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family4e-0858.5
NC_005810:3493607:349270734927073493624918Yersinia pestis biovar Microtus str. 91001, complete genomeDNA-binding transcriptional regulator OxyR4e-0858.5
NC_007778:5079500:509166050916605092574915Rhodopseudomonas palustris HaA2, complete genometranscriptional regulator, LysR family4e-0858.5
NC_008705:3201817:320181732018173202707891Mycobacterium sp. KMS, complete genometranscriptional regulator, LysR family5e-0858.5
NC_011741:1625535:162553516255351626416882Escherichia coli IAI1 chromosome, complete genomeputative DNA-binding transcriptional regulator5e-0858.5
NC_015563:3511951:353574935357493536705957Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator7e-0858.2
NC_016783:1397975:144823614482361449174939Corynebacterium diphtheriae INCA 402 chromosome, complete genomeLysR-family transcriptional regulator7e-0858.2
NC_016789:1432000:147314514731451474083939Corynebacterium diphtheriae PW8 chromosome, complete genomeLysR-family transcriptional regulator7e-0858.2
NC_016802:1317365:141243314124331413371939Corynebacterium diphtheriae HC02 chromosome, complete genomeLysR-family transcriptional regulator7e-0858.2
NC_002935:1378566:143930114393011440239939Corynebacterium diphtheriae NCTC 13129, complete genomePutative transcriptional regulator6e-0858.2
NC_013406:3521489:355588935558893556776888Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator6e-0858.2
NC_014479:2505823:251190625119062512796891Bacillus subtilis subsp. spizizenii str. W23 chromosome, completetranscriptional regulator6e-0858.2
NC_016787:1350676:141922014192201420158939Corynebacterium diphtheriae HC03 chromosome, complete genomeLysR-family transcriptional regulator6e-0858.2
NC_016790:1345638:139528813952881396226939Corynebacterium diphtheriae VA01 chromosome, complete genomeLysR family transcriptional regulator6e-0858.2
NC_016800:1411000:145578314557831456721939Corynebacterium diphtheriae BH8 chromosome, complete genomeLysR-family transcriptional regulator6e-0858.2
NC_016788:1376000:142268514226851423623939Corynebacterium diphtheriae HC04 chromosome, complete genomeLysR family transcriptional regulator1e-0757.8
NC_008543:2035292:205229420522942053181888Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, LysR family9e-0857.8
NC_016782:1385800:142764414276441428582939Corynebacterium diphtheriae 241 chromosome, complete genomeLysR-family transcriptional regulator9e-0857.8
NC_016786:1359064:142790914279091428847939Corynebacterium diphtheriae HC01 chromosome, complete genomeLysR-family transcriptional regulator9e-0857.8
NC_002516:2306776:232633423263342327287954Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator9e-0857.8
NC_008148:1567703:157249215724921573409918Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, LysR family9e-0857.8
NC_012997:2367400:237738723773872378310924Teredinibacter turnerae T7901, complete genomeputative HTH-type transcriptional regulator YcjZ9e-0857.8
NC_009778:1717458:175198417519841752856873Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-0857.8
NC_010498:1615980:163344816334481634329882Escherichia coli SMS-3-5, complete genomeLysR family transcriptional regulator8e-0857.8
NC_015381:1623587:166449516644951665412918Burkholderia gladioli BSR3 chromosome 1, complete sequenceLysR family transcriptional regulator1e-0757.4
NC_012792:547967:575521575521576438918Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, LysR family1e-0757.4
NC_015566:69190:718287182872682855Serratia sp. AS12 chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_015567:69190:718287182872682855Serratia sp. AS9 chromosome, complete genomeLysR family transcriptional regulator1e-0757.4
NC_009832:110239:112502112502113356855Serratia proteamaculans 568, complete genometranscriptional regulator, LysR family1e-0757.4
NC_010172:480000:501034501034501966933Methylobacterium extorquens PA1, complete genomeregulatory protein LysR1e-0757.4
NC_014727:995480:100973510097351010625891Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hypothetical protein2e-0757
NC_015259:734795:760053760053760955903Polymorphum gilvum SL003B-26A1 chromosome, complete genomeProbable transcriptional regulator1e-0757
NC_009648:4656187:465528746552874656204918Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-binding transcriptional regulator OxyR1e-0757
NC_003295:199354:236487236487237353867Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSCRIPTION REGULATOR PROTEIN1e-0757
NC_015677:1460000:147613114761311477033903Ramlibacter tataouinensis TTB310 chromosome, complete genomeLysR family transcriptional regulator1e-0757
NC_012988:4075429:409441740944174095379963Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator1e-0757
NC_010172:3712000:372849037284903729452963Methylobacterium extorquens PA1, complete genomeLysR substrate-binding1e-0757
NC_012808:3711806:373296837329683733930963Methylobacterium extorquens AM1, complete genomeputative transcriptional regulator, LysR family1e-0757
NC_008825:1113060:111928911192891120185897Methylibium petroleiphilum PM1, complete genometranscriptional regulator, LysR family1e-0757
NC_008313:2629281:263702826370282637957930Ralstonia eutropha H16 chromosome 1, complete sequencetranscriptional regulator, LysR-family2e-0756.6
NC_003198:3586000:360720436072043608121918Salmonella enterica subsp. enterica serovar Typhi str. CT18,hydrogen peroxide-inducible regulon activator2e-0756.6
NC_015137:2616222:267162126716212672583963Burkholderia sp. CCGE1001 chromosome 2, complete sequenceLysR family transcriptional regulator2e-0756.6
NC_016799:1439000:147945214794521480390939Corynebacterium diphtheriae 31A chromosome, complete genomeLysR family transcriptional regulator2e-0756.6
NC_013165:329185:381374381374382342969Slackia heliotrinireducens DSM 20476, complete genometranscriptional regulator2e-0756.6
NC_008563:1651270:165374916537491654630882Escherichia coli APEC O1, complete genomealdehyde-dehydrogenase like protein YneI2e-0756.6
NC_014008:354292:392991392991393962972Coraliomargarita akajimensis DSM 45221 chromosome, complete genometranscriptional regulator, LysR family3e-0756.2
NC_010552:2089140:210838421083842109271888Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, LysR family3e-0756.2
NC_020064:1150982:116030411603041161212909Serratia marcescens FGI94, complete genometranscriptional regulator3e-0756.2
NC_021177:118710:134252134252135148897Streptomyces fulvissimus DSM 40593, complete genomeLysR-family transcriptional regulatory protein3e-0756.2
NC_013947:1956923:196952919695291970404876Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, LysR family3e-0756.2
NC_014306:642152:659268659268660179912Erwinia billingiae Eb661, complete genomeTranscriptional regulator, LysR family3e-0756.2
NC_013406:3975512:398048739804873981392906Paenibacillus sp. Y412MC10 chromosome, complete genomeLysR family transcriptional regulator2e-0756.2
NC_010995:4460413:448232044823204483222903Cellvibrio japonicus Ueda107, complete genometranscriptional regulator2e-0756.2
NC_010001:1806000:182100418210041821903900Clostridium phytofermentans ISDg, complete genometranscriptional regulator, LysR family2e-0756.2
NC_006677:215466:223068223068224018951Gluconobacter oxydans 621H, complete genomeTranscriptional regulator3e-0755.8
NC_007348:2519447:252462125246212525511891Ralstonia eutropha JMP134 chromosome 2, complete sequenceregulatory protein, LysR:LysR, substrate-binding3e-0755.8
NC_020291:4033000:405339540533954054342948Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, LysR family3e-0755.8
NC_009615:1469642:151261415126141513540927Parabacteroides distasonis ATCC 8503 chromosome, complete genomeredox-sensitive transcriptional activator OxyR3e-0755.8
NC_009454:1389974:139267713926771393588912Pelotomaculum thermopropionicum SI, complete genometranscriptional regulator3e-0755.8
NC_009792:1479779:149990114999011500767867Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-0755.5
NC_013411:2236166:225897722589772259885909Geobacillus sp. Y412MC61, complete genometranscriptional regulator, LysR family5e-0755.5
NC_014915:1376035:139892113989211399829909Geobacillus sp. Y412MC52 chromosome, complete genometranscriptional regulator, LysR family5e-0755.5
NC_020063:1051310:105561410556141056516903Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator4e-0755.5
NC_013446:2130021:214586821458682146767900Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family4e-0755.5
NC_008027:3844355:388407038840703884960891Pseudomonas entomophila L48, complete genometranscriptional regulator CynR4e-0755.5
NC_012724:2202173:220217322021732203075903Burkholderia glumae BGR1 chromosome 1, complete genomePutative transcriptional regulator4e-0755.5
NC_014910:1050706:105721010572101058112903Alicycliphilus denitrificans BC chromosome, complete genomelysr substrate-binding protein6e-0755.1
NC_016935:2347691:239399123939912394887897Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator6e-0755.1
NC_015563:4629436:463133146313314632233903Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator5e-0755.1
NC_014414:1140357:118023111802311181133903Parvularcula bermudensis HTCC2503 chromosome, complete genometranscriptional regulator, LysR family protein5e-0755.1
NC_013740:1178370:120296312029631203850888Acidaminococcus fermentans DSM 20731, complete genometranscriptional regulator, LysR family5e-0755.1
NC_006510:1446490:146725614672561468167912Geobacillus kaustophilus HTA426, complete genometranscription activator of glutamate synthase(LysR family)5e-0755.1
NC_010939:1633000:165965016596501660543894Actinobacillus pleuropneumoniae serovar 7 str. AP76, completehydrogen peroxide-inducible genes activator5e-0755.1
NC_010278:1625695:165693916569391657832894Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,DNA-binding transcriptional regulator OxyR5e-0755.1
NC_016593:1527456:154935815493581550269912Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, LysR5e-0755.1
NC_015224:1703130:171942717194271720296870Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,LysR family transcriptional regulator7e-0754.7
NC_011740:3739395:374897037489703749938969Escherichia fergusonii ATCC 35469, complete genomePutative HTH-type transcriptional regulator (ybhD)8e-0754.7
NC_008789:350650:3931733931733941741002Halorhodospira halophila SL1, complete genometranscriptional regulator, LysR family8e-0754.7
NC_013850:2357608:237356223735622374473912Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family8e-0754.7
NC_011094:2061000:206856020685602069438879Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator, LysR family protein8e-0754.7
NC_016745:1548426:155274415527441553673930Oceanimonas sp. GK1 chromosome, complete genomeLysR family transcriptional regulator7e-0754.7
NC_002678:6061448:607659160765916077493903Mesorhizobium loti MAFF303099, complete genometranscriptional regulator7e-0754.7
NC_015660:1869962:188570818857081886592885Geobacillus thermoglucosidasius C56-YS93 chromosome, completeLysR family transcriptional regulator7e-0754.7
NC_014650:1862165:186839718683971869281885Geobacillus sp. Y4.1MC1 chromosome, complete genomeLysR family transcriptional regulator7e-0754.7
NC_019940:3660754:368351836835183684384867Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator7e-0754.7
NC_010501:4311873:431328943132894314200912Pseudomonas putida W619, complete genometranscriptional regulator, LysR family7e-0754.7
NC_020211:1655826:165757116575711658521951Serratia marcescens WW4, complete genometranscriptional activator of cyn operon, autorepressor6e-0754.7
NC_016935:2503071:252203525220352522907873Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator1e-0654.3
NC_010170:2374852:237864023786402379584945Bordetella petrii, complete genometranscriptional regulator, LysR-family1e-0654.3
NC_017190:2002718:200271820027182003635918Bacillus amyloliquefaciens LL3 chromosome, complete genomeLysR family transcriptional regulator9e-0754.3
NC_014375:1242750:125601912560191256897879Brevundimonas subvibrioides ATCC 15264 chromosome, complete genometranscriptional regulator, LysR family9e-0754.3
NC_014551:2057971:205797120579712058873903Bacillus amyloliquefaciens DSM 7, complete genometranscriptional regulator (LysR family)9e-0754.3
NC_011149:2040396:204687320468732047751879Salmonella enterica subsp. enterica serovar Agona str. SL483,transcriptional regulator, LysR family9e-0754.3
NC_014931:3642779:366101536610153661947933Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, LysR family8e-0754.3
NC_018691:4619245:463942346394234640322900Alcanivorax dieselolei B5 chromosome, complete genomeSDS degradation transcriptional activation protein1e-0653.9
NC_015379:2505233:254090225409022541798897Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family1e-0653.9
NC_010501:2609567:264371826437182644620903Pseudomonas putida W619, complete genometranscriptional regulator, LysR family1e-0653.9
NC_015690:1109335:116494511649451165829885Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_016935:1636278:173025017302501731134885Paenibacillus mucilaginosus 3016 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_020064:3157656:317869831786983179582885Serratia marcescens FGI94, complete genometranscriptional regulator1e-0653.9
NC_007492:3180480:320079332007933201665873Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, LysR family1e-0653.9
NC_003047:74986:932879328794138852Sinorhizobium meliloti 1021, complete genomePUTATIVE TRANSCRIPTION REGULATOR PROTEIN1e-0653.9
NC_014479:3510972:351242135124213513302882Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeLysR family transcriptional regulator1e-0653.9
NC_014121:1101093:112738711273871128286900Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetranscriptional regulator, LysR family1e-0653.9
NC_015690:1967244:1990674199067419916901017Paenibacillus mucilaginosus KNP414 chromosome, complete genomeLysR family transcriptional regulator1e-0653.9
NC_010067:1414000:141918614191861420058873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0653.5
UCMB5137:1522159:154067815406781541547870Bacillus atrophaeus UCMB-5137YofA2e-0653.5
NC_008800:3061484:306483130648313065700870Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,LysR family transcriptional regulator2e-0653.5
NC_009656:4527457:454897845489784549907930Pseudomonas aeruginosa PA7 chromosome, complete genomeLysR family transcriptional regulator2e-0653.5
NC_016830:530397:532354532354533244891Pseudomonas fluorescens F113 chromosome, complete genomeprotein YnfL2e-0653.5
NC_009925:1003000:101786010178601018756897Acaryochloris marina MBIC11017, complete genometranscriptional regulator, LysR family2e-0653.5
NC_009725:3878862:388670838867083887616909Bacillus amyloliquefaciens FZB42, complete genomeputative HTH-type transcriptional regulator2e-0653.5
NC_011000:2732330:279013927901392791041903Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein1e-0653.5
NC_015663:2807574:282295328229532823852900Enterobacter aerogenes KCTC 2190 chromosome, complete genomeYbhD2e-0653.1
NC_012660:4734363:473467847346784735574897Pseudomonas fluorescens SBW25 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_007492:3954345:399076239907623991676915Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, LysR family2e-0653.1
NC_019842:3921424:393001339300133930891879Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,HTH-type transcriptional regulator2e-0653.1
NC_005835:1773482:177348217734821774435954Thermus thermophilus HB27, complete genometranscriptional regulatory protein, lysR family (hydrogen peroxide-inducible genes activator)2e-0653.1
NC_014923:5868000:588362958836295884555927Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeLysR substrate-binding protein2e-0653.1
NC_015675:6423000:643830064383006439226927Mesorhizobium opportunistum WSM2075 chromosome, complete genomeLysR family transcriptional regulator2e-0653.1
NC_019973:5797000:581258958125895813515927Mesorhizobium australicum WSM2073, complete genometranscriptional regulator2e-0653.1
NC_020272:430500:444222444222445103882Bacillus amyloliquefaciens IT-45, complete genomeLysR family transcriptional regulator2e-0653.1
NC_014118:1528851:154451915445191545472954Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, LysR family2e-0653.1
NC_005085:2014987:204352020435202044464945Chromobacterium violaceum ATCC 12472, complete genomecyn operon transcriptional regulator2e-0653.1
NC_005810:1520000:153523815352381536107870Yersinia pestis biovar Microtus str. 91001, complete genomeLysR family transcriptional regulator3e-0652.8
NC_003143:1691000:170633417063341707203870Yersinia pestis CO92, complete genomeputative LysR-family transcriptional regulatory protein3e-0652.8
NC_008150:905000:920198920198921067870Yersinia pestis Antiqua, complete genomeputative LysR-family transcriptional regulatory protein3e-0652.8
NC_010159:3169266:318233131823313183200870Yersinia pestis Angola, complete genomesubstrate-binding transcriptional regulator, LysR family3e-0652.8
NC_014618:2423661:242366124236612424572912Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator3e-0652.8
NC_007925:3911323:392111039211103922084975Rhodopseudomonas palustris BisB18, complete genometranscriptional regulator, LysR family3e-0652.8
NC_020410:3868573:387724638772463878154909Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized HTH-type transcriptional regulator ywbI3e-0652.8
NC_017111:2248096:225382722538272254768942Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator LysR3e-0652.8
NC_013209:2248119:225385022538502254791942Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator LysR3e-0652.8
NC_010694:1:205502055021431882Erwinia tasmaniensis, complete genomeHTH-type transcriptional regulator BudR (Bud operon transcriptional regulator)3e-0652.8
NC_008149:2773139:277649327764932777362870Yersinia pestis Nepal516, complete genomeLysR-family transcriptional regulatory protein3e-0652.8
NC_004088:2937077:294043129404312941300870Yersinia pestis KIM, complete genometranscriptional regulator LYSR-type3e-0652.8
NC_017265:2557476:256083025608302561699870Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative LysR-family transcriptional regulatory protein3e-0652.8
NC_017168:3948514:395186839518683952737870Yersinia pestis A1122 chromosome, complete genomeputative LysR-family transcriptional regulatory protein3e-0652.8
NC_017160:2054289:205764320576432058512870Yersinia pestis D182038 chromosome, complete genomeputative LysR-family transcriptional regulatory protein3e-0652.8
NC_017154:1707500:172293217229321723801870Yersinia pestis D106004 chromosome, complete genomeputative LysR-family transcriptional regulatory protein3e-0652.8
NC_014029:1760948:178083917808391781708870Yersinia pestis Z176003 chromosome, complete genomeputative LysR-family transcriptional regulatory protein3e-0652.8
NC_009708:2788855:279220927922092793078870Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeLysR family transcriptional regulator3e-0652.8
NC_009381:1655731:165908516590851659954870Yersinia pestis Pestoides F chromosome, complete genomeLysR family transcriptional regulator3e-0652.8
NC_010465:2820500:282265928226592823528870Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, LysR family3e-0652.8
NC_010634:1809500:182456118245611825430870Yersinia pseudotuberculosis PB1/+, complete genomeLysR family transcriptional regulator3e-0652.8
NC_006155:1807902:182435218243521825221870Yersinia pseudotuberculosis IP 32953, complete genomeputative LysR-family transcriptional regulatory protein3e-0652.8
NC_013173:3890370:390586339058633906753891Desulfomicrobium baculatum DSM 4028, complete genometranscriptional regulator, LysR family4e-0652.4
NC_007005:1738500:175319917531991754128930Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LysR:LysR, substrate-binding4e-0652.4
NC_011894:6888562:691884769188476919731885Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family4e-0652.4
NC_016514:891772:914628914628915524897Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YafC4e-0652.4
NC_012988:769981:833864833864834748885Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator4e-0652.4
NC_010338:4148667:415683341568334157816984Caulobacter sp. K31, complete genometranscriptional regulator, LysR family4e-0652.4
NC_016002:2652500:265283226528322653815984Pseudogulbenkiania sp. NH8B, complete genomeLysR family transcriptional regulator3e-0652.4
NC_020272:20435:325493254933445897Bacillus amyloliquefaciens IT-45, complete genomeHTH-type transcriptional regulator YwbI3e-0652.4
NC_002944:1781905:178902317890231789940918Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein5e-0652
NC_014972:480355:480355480355481275921Desulfobulbus propionicus DSM 2032 chromosome, complete genomeLysR family transcriptional regulator5e-0652
NC_009720:750612:777841777841778827987Xanthobacter autotrophicus Py2, complete genomeLysR family transcriptional regulator5e-0652
NC_015583:4879:179641796418851888Novosphingobium sp. PP1Y plasmid Mpl, complete sequenceLysR family transcriptional regulator5e-0652
NC_013446:2062862:207473420747342075612879Comamonas testosteroni CNB-2, complete genometranscriptional regulator, LysR family4e-0652
NC_013729:4978401:499563649956364996517882Kribbella flavida DSM 17836, complete genometranscriptional regulator, LysR family7e-0651.6
NC_014165:2081914:208323820832382084143906Thermobispora bispora DSM 43833 chromosome, complete genomeLysR family transcriptional regulator7e-0651.6
NC_013850:1753716:175371617537161754630915Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family7e-0651.6
NC_007760:3655433:366105536610553661948894Anaeromyxobacter dehalogenans 2CP-C, complete genometranscriptional regulator, LysR family6e-0651.6
NC_016628:935420:951326951326952234909Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, LysR family protein6e-0651.6
NC_008750:3435495:344989034498903450801912Shewanella sp. W3-18-1, complete genometranscriptional regulator, LysR family6e-0651.6
NC_009438:1282022:128202212820221282933912Shewanella putrefaciens CN-32 chromosome, complete genomeLysR family transcriptional regulator6e-0651.6
NC_007005:2191500:220082522008252201748924Pseudomonas syringae pv. syringae B728a, complete genomeregulatory protein, LysR:LysR, substrate-binding6e-0651.6
NC_010002:2518599:252332825233282524272945Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family6e-0651.6
NC_013850:2846069:286444228644422865362921Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, LysR family5e-0651.6
NC_011283:2836000:287450628745062875426921Klebsiella pneumoniae 342 chromosome, complete genomeLysR family transcriptional regulator5e-0651.6
NC_006361:3132000:315010631501063151083978Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator8e-0651.2
NC_008687:388262:403185403185404078894Paracoccus denitrificans PD1222 chromosome 2, complete sequencetranscriptional regulator, LysR family9e-0651.2
NC_016628:1190366:120946812094681210349882Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, LysR family protein9e-0651.2
NC_014618:4657719:468652846865284687457930Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator9e-0651.2
NC_011365:1865687:187089818708981871842945Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeLysR family transcriptional regulator9e-0651.2
NC_015727:1076927:108784310878431088742900Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator8e-0651.2
NC_009454:1577319:161961316196131620506894Pelotomaculum thermopropionicum SI, complete genometranscriptional regulator7e-0651.2
NC_015565:348941:350352350352351260909Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeLysR family transcriptional regulator7e-0651.2
NC_010557:207846:215435215435216322888Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family7e-0651.2
NC_010170:4800000:487547148754714876400930Bordetella petrii, complete genometranscriptional regulator, LysR-family7e-0651.2
NC_007645:4032668:404113840411384042070933Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator7e-0651.2
NC_016819:1:466046605610951Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq202,transcriptional regulator7e-0651.2
NC_008043:167108:171207171207172082876Silicibacter sp. TM1040 mega plasmid, complete sequencetranscriptional regulator, LysR family1e-0550.8
NC_015563:4911188:492675049267504927694945Delftia sp. Cs1-4 chromosome, complete genomeLysR family transcriptional regulator1e-0550.8