Pre_GI: BLASTP Hits

Some Help

Query: NC_003030:279643:297523 Clostridium acetobutylicum ATCC 824, complete genome

Start: 297523, End: 297888, Length: 366

Host Lineage: Clostridium acetobutylicum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated in 1924 from garden soil in Connecticut, USA, by E. Wyer and L. Rettger. It is one of the best studied solventogenic clostridia. Solvent-producing bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism is a benign saccharolytic and proteolytic soil bacterium capable of producing a number of organic solvents (solventogenic bacterium) through fermentation of various organic compounds. acetobutyricum were isolated by Chaim Weizman during the World War I and used to develop industrial starch-based acetone, butanol and ethanol fermentation processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017295:279633:297513297513297878366Clostridium acetobutylicum EA 2018 chromosome, complete genomeGntR family transcriptional regulator6e-54209
NC_015687:279641:297521297521297886366Clostridium acetobutylicum DSM 1731 chromosome, complete genomeGntR family transcriptional regulator6e-54209
NC_015425:2690448:271266827126682713036369Clostridium botulinum BKT015925 chromosome, complete genomeGntR family transcriptional regulator3e-25113
NC_008593:2457594:247967724796772480045369Clostridium novyi NT, complete genometranscriptional regulator, GntR family2e-24110
NC_015949:71474:862228622286587366Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeGntR family transcriptional regulator3e-24110
NC_013515:416760:430990430990431343354Streptobacillus moniliformis DSM 12112, complete genometranscriptional regulator, GntR family2e-1787.4
NC_013517:2437574:247965924796592480018360Sebaldella termitidis ATCC 33386, complete genometranscriptional regulator, GntR family3e-1787.4
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome3e-1580.5
NC_015425:2144639:214552921455292145924396Clostridium botulinum BKT015925 chromosome, complete genomeGntR family transcriptional regulator2e-1478.2
NC_008261:2524913:253311325331132533469357Clostridium perfringens ATCC 13124, complete genometranscriptional regulator, GntR family2e-1477.8
NC_008593:1917118:191914919191491919529381Clostridium novyi NT, complete genometranscriptional regulator, gntR family8e-1475.9
NC_004193:375416:546902546902547279378Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-1375.1
NC_016023:1538000:155278415527841553185402Bacillus coagulans 36D1 chromosome, complete genomeGntR family transcriptional regulator6e-1269.3
NC_013235:3913000:392692739269273927319393Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, GntR family2e-1167.8
NC_009725:2859630:286726728672672867659393Bacillus amyloliquefaciens FZB42, complete genomeYtrA5e-1166.6
NC_014363:114239:129522129522129881360Olsenella uli DSM 7084 chromosome, complete genometranscriptional regulator, GntR family6e-1166.2
NC_014393:92500:928219282193204384Clostridium cellulovorans 743B chromosome, complete genometranscriptional regulator, GntR family2e-1064.7
NC_012673:2535427:257491425749142575303390Exiguobacterium sp. AT1b, complete genometranscriptional regulator, GntR family2e-1064.7
NC_013165:329185:374694374694375074381Slackia heliotrinireducens DSM 20476, complete genomepredicted transcriptional regulator3e-1063.9
NC_015957:8103472:812814981281498128580432Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGntR family transcriptional regulator8e-1062.4
NC_016631:5478098:550109155010915501534444Granulicella mallensis MP5ACTX8 chromosome, complete genomeGntR family transcriptional regulator3e-0960.5
NC_014376:3399366:340246434024643402877414Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, GntR family4e-0960.1
NC_009706:3882500:389714138971413897554414Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator4e-0960.1
NC_011837:3814000:382864438286443829057414Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0960.1
NC_009921:1611132:161877516187751619167393Frankia sp. EAN1pec, complete genometranscriptional regulator, GntR family5e-0959.7
NC_014152:1:206392063921016378Thermincola sp. JR, complete genometranscriptional regulator, GntR family6e-0959.3
NC_015738:629297:643961643961644227267Eggerthella sp. YY7918, complete genomehypothetical protein9e-0958.9
NC_004557:691944:7010227010227024671446Clostridium tetani E88, complete genometranscriptional regulatory protein2e-0858.2
NC_012781:2148478:215126721512672151716450Eubacterium rectale ATCC 33656, complete genometranscriptional regulator, GntR family2e-0857.4
NC_013947:2351208:236247523624752362864390Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, GntR family3e-0857.4
NC_016109:116995:143044143044143424381Kitasatospora setae KM-6054, complete genomeGntR family transcriptional regulator5e-0856.6
NC_013205:1275012:129900712990071299420414Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, GntR family4e-0856.6
UCMB5137:2128500:214259721425972142974378Bacillus atrophaeus UCMB-5137GntR family transcriptional regulator6e-0856.2
NC_004557:2711702:272619827261982727172975Clostridium tetani E88, complete genometranscriptional regulator, putative regular for glutamate degradation6e-0856.2
NC_002976:1540794:154170815417081542085378Staphylococcus epidermidis RP62A, complete genometranscriptional regulator, GntR family7e-0856.2
NC_008346:2579756:258415125841512584543393Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetranscriptional regulator, GntR family9e-0855.8
NC_010001:2836995:285926328592632859625363Clostridium phytofermentans ISDg, complete genometranscriptional regulator, GntR family7e-0855.8
CP002207:2169277:217930621793062179683378Bacillus atrophaeus 1942, complete genomeGntR family transcriptional regulator7e-0855.8
NC_014639:2169277:217930621793062179683378Bacillus atrophaeus 1942 chromosome, complete genomeGntR family transcriptional regulator7e-0855.8
NC_012669:96966:114794114794115174381Beutenbergia cavernae DSM 12333, complete genometranscriptional regulator, GntR family1e-0755.5
NC_014815:3272791:327794232779423278337396Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family2e-0754.3
NC_017214:1727676:172855117285511729246696Bifidobacterium animalis subsp. lactis BB-12 chromosome, completeGntR family transcriptional regulator7e-0752.8
NC_017215:1091941:109343310934331094128696Bifidobacterium animalis subsp. lactis CNCM I-2494 chromosome,GntR family transcriptional regulator7e-0752.8
NC_012815:1092795:109367010936701094206537Bifidobacterium animalis subsp. lactis DSM 10140, complete genomehypothetical protein7e-0752.8
NC_012814:1092860:109373510937351094271537Bifidobacterium animalis subsp. lactis Bl-04, complete genomehypothetical protein7e-0752.8
NC_017217:1092916:109379110937911094327537Bifidobacterium animalis subsp. lactis V9 chromosome, completehypothetical protein7e-0752.8
NC_011835:1819707:182058218205821821001420Bifidobacterium animalis subsp. lactis AD011 chromosome, completeregulatory protein GntR6e-0752.8
NC_017216:1092751:109362610936261094045420Bifidobacterium animalis subsp. lactis BLC1, complete genometranscriptional regulator, gntR family protein6e-0752.8
NC_020164:887510:906911906911907288378Staphylococcus warneri SG1, complete genomeGntR family transcriptional regulator1e-0652
NC_018515:4442500:445361844536184454571954Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator1e-0652
NC_013204:2826500:282801928280192828498480Eggerthella lenta DSM 2243, complete genometranscriptional regulator, GntR family1e-0652
NC_013642:545464:565944565944566309366Thermotoga naphthophila RKU-10, complete genometranscriptional regulator, GntR family2e-0651.2
NC_009486:155651:155651155651156016366Thermotoga petrophila RKU-1 chromosome, complete genomeregulatory protein GntR2e-0651.2
NC_020911:1353896:1364156136415613655561401Octadecabacter antarcticus 307, complete genomeGntR family transcriptional regulator2e-0651.2
NC_014391:16188:244592445925325867Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeregulatory protein GntR HTH2e-0651.2
NC_014815:6779538:679056667905666791432867Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, gntr family2e-0651.2
NC_006510:2044347:206127920612792062007729Geobacillus kaustophilus HTA426, complete genometranscriptional regulator2e-0650.8
NC_019897:329945:376575376575376955381Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator3e-0650.8
NC_011837:238160:267607267607268584978Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0650.4
NC_009706:238160:267607267607268584978Clostridium kluyveri DSM 555 chromosome, complete genometranscriptional regulator4e-0650.4
NC_014376:4369666:437329843732984374047750Clostridium saccharolyticum WM1 chromosome, complete genometranscriptional regulator, GntR family4e-0650.1
NC_021171:4549673:455230045523004552956657Bacillus sp. 1NLA3E, complete genomeGntR family transcriptional regulator9e-0648.9