Pre_GI: BLASTP Hits

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Query: NC_002973:369650:369650 Listeria monocytogenes str. 4b F2365, complete genome

Start: 369650, End: 371506, Length: 1857

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain was isolated in 1985 in California, USA, during an outbreak of listeriosis among patients with AIDS. The strain is of serotype 4b and was isolated from a cheese product that caused the outbreak. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013768:29324:3482134821373762556Listeria monocytogenes 08-5923, complete genomehypothetical protein7e-64245
NC_013766:29324:3482134821373762556Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein7e-64245
NC_015160:2418317:242934924293492430212864Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein1e-25118
NC_015846:2285017:229573222957322296655924Capnocytophaga canimorsus Cc5 chromosome, complete genomeinternalin-like protein1e-24115
NC_013315:1707293:1727689172768917300882400Clostridium difficile CD196 chromosome, complete genomepenicillin-binding protein5e-24113
NC_015501:154590:1552031552031578692667Porphyromonas asaccharolytica DSM 20707 chromosome, completehypothetical protein1e-1895.5
NC_011026:2269986:2303813230381323064072595Chloroherpeton thalassium ATCC 35110, complete genomehypothetical protein6e-1893.2
NC_013891:640784:6638236638236679084086Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomeinternalin-like protein, cell wall surface anchor (LPXTG motif) family protein2e-1688.2
NC_015501:556994:5718515718515735301680Porphyromonas asaccharolytica DSM 20707 chromosome, completehypothetical protein3e-1687
NC_002973:369650:3721533721533752963144Listeria monocytogenes str. 4b F2365, complete genomecell wall surface anchor family protein1e-1172
NC_016822:1818897:1826129182612918272921164Shigella sonnei 53G, complete genomehypothetical protein8e-0962.8
NC_007384:1737885:1746807174680717479701164Shigella sonnei Ss046, complete genomehypothetical protein8e-0962.8
NC_002973:369650:3756863756863810135328Listeria monocytogenes str. 4b F2365, complete genomecell wall surface anchor family protein2e-0861.2
NC_012488:349862:3604113604113657385328Listeria monocytogenes Clip81459, complete genomeinternalin proteins, peptidoglycan bound protein (LPXTG motif)2e-0861.2
NC_007606:1515403:1526379152637915274011023Shigella dysenteriae Sd197, complete genomehypothetical protein1e-0758.5
NC_010337:98974:1205681205681293908823Heliobacterium modesticaldum Ice1, complete genomemultidomain protein with s-layer homology region, glug motif, ig motif, i-set domain, pkd domain8e-0756.2
NC_013406:3819577:3834134383413438355491416Paenibacillus sp. Y412MC10 chromosome, complete genomecopper amine oxidase domain-containing protein8e-0755.8
NC_018691:2254566:2270904227090422722141311Alcanivorax dieselolei B5 chromosome, complete genomeYD repeat protein1e-0655.5
NC_008555:444927:4607674607674668506084Listeria welshimeri serovar 6b str. SLCC5334, complete genomepeptidoglycan linked surface protein, putative1e-0655.5
NC_013891:1639694:1663596166359616687645169Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomecell wall surface anchor family protein, putative1e-0655.5
NC_011750:1809943:1820681182068118219461266Escherichia coli IAI39 chromosome, complete genomehypothetical protein1e-0655.1
NC_010498:1700447:1707032170703217082911260Escherichia coli SMS-3-5, complete genomehypothetical protein2e-0655.1
NC_008255:3331613:3332977333297733352682292Cytophaga hutchinsonii ATCC 33406, complete genomeconserved hypothetical protein with multiple leucine-rich repeat domains2e-0654.7
NC_003212:456214:4720404720404780816042Listeria innocua Clip11262, complete genomeputative peptidoglycan bound protein (LPXTG motif)3e-0653.9