Pre_GI: BLASTP Hits

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Query: NC_002971:951102:962236 Coxiella burnetii RSA 493, complete genome

Start: 962236, End: 963378, Length: 1143

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013895:117429:154002154002154565564Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete5e-0755.8
NC_014836:155924:176973176973177735763Desulfurispirillum indicum S5 chromosome, complete genome8e-0652
NC_013061:1236235:1259301125930112604731173Pedobacter heparinus DSM 2366, complete genomeAAA ATPase3e-21102
NC_015693:53196:6700967009681811173Runella slithyformis DSM 19594 plasmid pRUNSL01, complete sequenceAAA ATPase2e-1997.1
NC_011979:2352961:2376564237656423777151152Geobacter sp. FRC-32, complete genomeAAA ATPase6e-2099
NC_013926:974668:9900719900719912431173Aciduliprofundum boonei T469 chromosome, complete genomeAAA ATPase5e-1789.4
NC_015221:12389:2409824098252821185Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequenceAAA ATPase4e-22105
NC_015703:754172:7602477602477613741128Runella slithyformis DSM 19594 chromosome, complete genomeAAA ATPase4e-21102
NC_013037:1587673:1589835158983515910191185Dyadobacter fermentans DSM 18053, complete genomeAAA ATPase1e-1894.4
NC_017275:342000:3447993447993460401242Sulfolobus islandicus HVE10/4 chromosome, complete genomeAAA ATPase7e-0962
NC_017276:735678:7543337543337555741242Sulfolobus islandicus REY15A chromosome, complete genomeAAA ATPase1e-0758.2
NC_014216:1197704:1201623120162312028761254Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeAAA family ATPase2e-20100
NC_014410:2329838:2329838232983823312741437Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,AAA family ATPase8e-0755.1
NC_013889:1623697:1637019163701916381851167Thioalkalivibrio sp. K90mix chromosome, complete genomeAAA family ATPase4e-27122
NC_014836:2848000:2867709286770928689681260Desulfurispirillum indicum S5 chromosome, complete genomeAAA family ATPase8e-24111
NC_017276:2240069:2250163225016322514791317Sulfolobus islandicus REY15A chromosome, complete genomeAAA+ ATPase superfamily3e-1169.7
NC_014727:95875:1006601006601018501191Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,aaa+ superfamily ATPase3e-1376.6
NC_009615:2985144:2994786299478629960571272Parabacteroides distasonis ATCC 8503 chromosome, complete genomeATPase4e-0859.7
NC_013410:1285857:1320628132062813219141287Fibrobacter succinogenes subsp. succinogenes S85 chromosome,ATPase7e-0652
NC_013714:1830959:1845289184528918464611173Bifidobacterium dentium Bd1, complete genomeATPase6e-26118
NC_017042:1206000:1209593120959312107471155Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeATPase4e-22105
NC_016051:766683:7680677680677693381272Thermococcus sp. AM4 chromosome, complete genomeATPase6e-1892
NC_015581:680460:6945596945596958211263Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeATPase2e-0860.8
NC_008609:251608:2594902594902607731284Pelobacter propionicus DSM 2379, complete genomeATPase3e-0757
NC_015578:3980496:4020348402034840215591212Treponema primitia ZAS-2 chromosome, complete genomeATPase8e-1685.1
NC_015578:1430112:1439028143902814402571230Treponema primitia ZAS-2 chromosome, complete genomeATPase2e-0860.5
NC_018867:121512:1249551249551261751221Dehalobacter sp. CF chromosome, complete genomeATPase2e-0757
NC_018720:176306:2234562234562247721317Bifidobacterium asteroides PRL2011 chromosome, complete genomeATPase1e-0654.7
NC_010814:794211:8206088206088217921185Geobacter lovleyi SZ, complete genomeATPase (AAA+ superfamily)-like protein2e-26120
NC_010831:40000:6193461934631091176Chlorobium phaeobacteroides BS1, complete genomeATPase (AAA+ superfamily)-like protein5e-27122
NC_009051:1455183:1493995149399514951731179Methanoculleus marisnigri JR1, complete genomeATPase (AAA+ superfamily)-like protein1e-21104
NC_012588:857500:8734098734098746501242Sulfolobus islandicus M.14.25 chromosome, complete genomeATPase AAA1e-0861.6
NC_016147:307275:3272533272533284461194Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeATPase AAA2e-1377
NC_009943:940835:9612009612009624381239Candidatus Desulfococcus oleovorans Hxd3, complete genomeATPase protein2e-1687
NC_008554:4699577:4713846471384647150931248Syntrophobacter fumaroxidans MPOB, complete genomeATPase, AAA+ superfamily2e-1377.4
NC_009943:748788:7636897636897648551167Candidatus Desulfococcus oleovorans Hxd3, complete genomeconserved hypothetical protein1e-1790.9
NC_011528:767940:7757897757897769311143Coxiella burnetii CbuK_Q154, complete genomehypothetical ATPase0773
NC_014830:335380:3421873421873434911305Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein6e-2098.6
NC_009073:455381:4724124724124737041293Pyrobaculum calidifontis JCM 11548, complete genomehypothetical protein9e-1581.6
NC_000868:1386592:1402265140226514035931329Pyrococcus abyssi GE5, complete genomehypothetical protein2e-1377
NC_011060:244949:2576082576082588491242Pelodictyon phaeoclathratiforme BU-1, complete genomehypothetical protein9e-1168.2
NC_012780:189949:2020992020992033131215Eubacterium eligens ATCC 27750 plasmid unnamed, complete sequencehypothetical protein4e-0962.8
NC_011593:53044:5463454634558571224Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein2e-0860.8
NC_009727:1001203:1009958100995810111001143Coxiella burnetii Dugway 7E9-12, complete genomehypothetical protein0773
NC_013222:229190:2595032595032606151113Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-1997.8
NC_014216:2097500:2112498211249821137631266Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehypothetical protein7e-1582
NC_014752:933000:9343389343389355671230Neisseria lactamica ST-640, complete genomehypothetical protein1e-1274.3
NC_012588:2327767:2355501235550123568171317Sulfolobus islandicus M.14.25 chromosome, complete genomehypothetical protein3e-1170.1
NC_010830:1543548:1545696154569615469041209Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein3e-1066.2
NC_008701:168662:1743141743141755551242Pyrobaculum islandicum DSM 4184, complete genomehypothetical protein1e-0964.3
NC_013895:117429:1554841554841566921209Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein2e-0860.1
NC_012470:1390285:1396812139681213980171206Streptococcus equi subsp. zooepidemicus, complete genomehypothetical protein2e-0653.9
NC_016048:522637:5381165381165393271212Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein8e-0651.6
NC_008687:965152:9688149688149699861173Paracoccus denitrificans PD1222 chromosome 2, complete sequencehypothetical protein4e-22105
NC_015164:3793999:3807508380750838086291122Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein5e-1479
NC_012632:2415739:2439602243960224409181317Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein3e-1170.1
NC_013769:2445245:2463017246301724643331317Sulfolobus islandicus L.D.8.5 chromosome, complete genomehypothetical protein4e-1169.7
NC_010525:285805:2875092875092887501242Thermoproteus neutrophilus V24Sta, complete genomehypothetical protein1e-1067.8
NC_018876:516220:5542485542485555311284Methanolobus psychrophilus R15 chromosome, complete genomehypothetical protein1e-0964.7
NC_015164:438000:4603724603724616281257Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein8e-0652
NC_007517:1468719:1494288149428814954721185Geobacter metallireducens GS-15, complete genomehypothetical protein6e-2098.6
NC_008278:3601959:3618392361839236196691278Frankia alni ACN14a, complete genomehypothetical protein8e-1891.7
NC_010803:242705:2427052427052441291425Chlorobium limicola DSM 245, complete genomehypothetical protein3e-1686.3
NC_006361:2920028:2927772292777229290971326Nocardia farcinica IFM 10152, complete genomehypothetical protein5e-1479.3
NC_012623:160224:1713621713621726781317Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein3e-1169.7
NC_012590:637651:6476426476426488951254Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein1e-1067.8
NC_000961:597385:6147576147576160761320Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-0964.7
NC_017219:51563:5442554425556541230Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-0860.8
NC_006512:551312:5546145546145558581245Idiomarina loihiensis L2TR, complete genomePredicted ATPase, AAA+ superfamily6e-1892
NC_013714:2477638:2483228248322824843551128Bifidobacterium dentium Bd1, complete genomepredicted ATPase, AAA+ superfamily4e-1066.2
NC_016050:1088223:1105545110554511066991155Rickettsia japonica YH, complete genomeputative AAA+ superfamily ATPase2e-21103
NC_007940:97949:1195231195231206621140Rickettsia bellii RML369-C, complete genomePutative AAA+ superfamily ATPase3e-1892.8
NC_016913:83988:8735887358885121155Rickettsia rickettsii str. Brazil chromosome, complete genomeputative ATPase1e-21103
NC_019942:1270060:1293047129304712943121266Aciduliprofundum sp. MAR08-339, complete genomeputative ATPase (AAA+ superfamily)3e-1273.2
NC_019942:686564:7003457003457016011257Aciduliprofundum sp. MAR08-339, complete genomeputative ATPase (AAA+ superfamily)4e-1169.3
NC_019942:686564:7016927016927029571266Aciduliprofundum sp. MAR08-339, complete genomeputative ATPase (AAA+ superfamily)5e-1272.4
NC_015386:125499:1299251299251311421218Treponema succinifaciens DSM 2489 plasmid pTRESU01, completeputative GTP-binding protein9e-2098.2