Pre_GI: BLASTP Hits

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Query: NC_002971:951102:952243 Coxiella burnetii RSA 493, complete genome

Start: 952243, End: 953208, Length: 966

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009727:1001203:102013510201351021100966Coxiella burnetii Dugway 7E9-12, complete genomebiotin synthase8e-173606
NC_011528:767940:785966785966786931966Coxiella burnetii CbuK_Q154, complete genomebiotin synthase8e-173606
NC_011527:953442:972155972155973120966Coxiella burnetii CbuG_Q212, complete genomebiotin synthase8e-173606
NC_003919:457482:4587794587794598131035Xanthomonas axonopodis pv. citri str. 306, complete genomebiotin synthase8e-105380
NC_007484:2392739:2414935241493524159721038Nitrosococcus oceani ATCC 19707, complete genomeBiotin synthase1e-104379
NC_017271:4410500:4429592442959244306261035Xanthomonas campestris pv. raphani 756C chromosome, completebiotin synthase5e-104377
NC_007086:459934:4624004624004634341035Xanthomonas campestris pv. campestris str. 8004, complete genomebiotin synthase4e-104377
NC_010688:449649:4496494496494506831035Xanthomonas campestris pv. campestris, complete genomebiotin synthase4e-104377
NC_003902:461808:4618084618084628421035Xanthomonas campestris pv. campestris str. ATCC 33913, completebiotin synthase4e-104377
NC_010513:44886:5726357263582881026Xylella fastidiosa M12 chromosome, complete genomebiotin synthase2e-101369
NC_015381:4114469:4117798411779841188891092Burkholderia gladioli BSR3 chromosome 1, complete sequencebiotin synthase2e-101369
NC_002488:45219:5810358103591281026Xylella fastidiosa 9a5c, complete genomebiotin synthase3e-101368
NC_018605:558391:580719580719581681963Cardinium endosymbiont cPer1 of Encarsia pergandiella, completebiotin synthase6e-101367
NC_012917:1740542:1757056175705617580931038Pectobacterium carotovorum subsp. carotovorum PC1, complete genomebiotin synthase6e-100364
AP010958:867869:8833048833048843441041Escherichia coli O103:H2 str. 12009 DNA, complete genomebiotin synthase BioB4e-100364
NC_011601:756885:7750707750707761101041Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomebiotin synthase4e-100364
NC_012967:786534:8019708019708030101041Escherichia coli B str. REL606 chromosome, complete genomebiotin synthase4e-100364
NC_013353:867869:8833048833048843441041Escherichia coli O103:H2 str. 12009, complete genomebiotin synthase BioB4e-100364
NC_013941:1014386:1028740102874010297801041Escherichia coli O55:H7 str. CB9615 chromosome, complete genomebiotin synthase4e-100364
NC_016632:1278500:1278547127854712795931047Serratia symbiotica str. 'Cinara cedri' chromosome, completebiotin synthetase1e-99363
NC_002695:917509:9317109317109327501041Escherichia coli O157:H7 str. Sakai, complete genomebiotin synthetase3e-99361
NC_011353:921500:9350759350759361151041Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebiotin synthase3e-99361
NC_002696:3759551:3763707376370737647321026Caulobacter crescentus CB15, complete genomebiotin synthase3e-99361
NC_019973:5650646:5689261568926156902711011Mesorhizobium australicum WSM2073, complete genomebiotin synthetase1e-98359
NC_015675:6276357:6314972631497263159821011Mesorhizobium opportunistum WSM2075 chromosome, complete genomebiotin synthase1e-98359
NC_013009:532000:549509549509550486978Neorickettsia risticii str. Illinois, complete genomebiotin synthase1e-98359
NC_002655:919654:9333629333629344021041Escherichia coli O157:H7 EDL933, complete genomebiotin synthesis, sulfur insertion?2e-98359
NC_007798:520109:5348625348625358631002Neorickettsia sennetsu str. Miyayama, complete genomebiotin synthase7e-98357
NC_010519:1684901:169621016962101697193984Haemophilus somnus 2336 chromosome, complete genomebiotin synthase2e-96352
NC_015581:1791658:1811253181125318123051053Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeBiotin synthase2e-96352
NC_014774:293800:315878315878316864987Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completebiotin synthase3e-96351
NC_014100:172452:1872051872051882121008Caulobacter segnis ATCC 21756 chromosome, complete genomebiotin synthase6e-96350
NC_011992:1968258:1976418197641819774701053Acidovorax ebreus TPSY, complete genomebiotin synthase2e-95349
NC_007778:3784104:3811502381150238125631062Rhodopseudomonas palustris HaA2, complete genomebiotin synthase5e-95347
NC_008686:1383891:140283414028341403808975Paracoccus denitrificans PD1222 chromosome 1, complete sequencebiotin synthase1e-93343
NC_016642:3286654:3303273330327333043341062Pseudovibrio sp. FO-BEG1 chromosome, complete genomebiotin synthase2e-92339
NC_015138:3022414:3042438304243830435021065Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completebiotin synthase1e-90333
NC_017249:7993713:801428180142818015276996Bradyrhizobium japonicum USDA 6, complete genomebiotin synthetase5e-90331
NC_004463:2262467:226521822652182266213996Bradyrhizobium japonicum USDA 110, complete genomebiotin synthetase5e-90331
NC_005125:4557889:456275645627564563712957Gloeobacter violaceus PCC 7421, complete genomebiotin synthase3e-87322
NC_015711:570910:5757905757905768241035Myxococcus fulvus HW-1 chromosome, complete genomebiotin synthase1e-85316
NC_009937:412302:414091414091415068978Azorhizobium caulinodans ORS 571, complete genomebiotin synthase precursor2e-85315
NC_005071:1111605:1138944113894411399511008Prochlorococcus marinus str. MIT 9313, complete genomeBiotin synthase7e-83307
NC_015510:6653159:6672470667247066735671098Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeBiotin synthase1e-80300
NC_014152:1:195191951920496978Thermincola sp. JR, complete genomebiotin synthase4e-56218
NC_019976:63260:6326063260643721113Natronococcus occultus SP4 plasmid 2, complete sequencebiotin synthase9e-50197
NC_014758:1546898:156366315636631564625963Calditerrivibrio nitroreducens DSM 19672 chromosome, completebiotin synthase5e-46185
NC_014933:2555210:2561214256121425634482235Bacteroides helcogenes P 36-108 chromosome, complete genomeadenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme; biotin synthase8e-46184
NC_021184:3149000:315906631590663160037972Desulfotomaculum gibsoniae DSM 7213, complete genomebiotin synthetase5e-45181
NC_015557:905145:919661919661920656996Hydrogenobaculum sp. 3684 chromosome, complete genomebiotin synthase1e-44180
NC_020411:905335:919851919851920846996Hydrogenobaculum sp. HO, complete genomebiotin synthase1e-44180
NC_015587:905255:919771919771920766996Hydrogenobaculum sp. SHO chromosome, complete genomeBiotin synthase1e-44180
NC_011126:922182:934606934606935601996Hydrogenobaculum sp. Y04AAS1, complete genomebiotin synthase2e-44179
NC_012590:37697:670766707668056981Corynebacterium aurimucosum ATCC 700975, complete genomebiotin synthase2e-43176
NC_014166:2983564:298356429835642984424861Arcobacter nitrofigilis DSM 7299 chromosome, complete genomebiotin synthase6e-42171
NC_014633:837588:863873863873864838966Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequencebiotin synthase2e-41170
NC_010617:263985:2697262697262711351410Kocuria rhizophila DC2201, complete genomebiotin synthase2e-41170
NC_015275:443213:443213443213444184972Clostridium lentocellum DSM 5427 chromosome, complete genomebiotin synthase2e-41169
NC_014216:1787000:180546118054611806384924Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomebiotin synthase2e-41169
NC_016776:1878791:1887351188735118895972247Bacteroides fragilis 638R, complete genomeputative adenosylmethionine-8-amino-7-oxononanoate aminotransferase2e-41169
NC_003228:1870953:1883203188320318854492247Bacteroides fragilis NCTC 9343, complete genomeputative adenosylmethionine-8-amino-7-oxononanoate aminotransferase5e-41168
NC_007760:3948730:3971952397195239730371086Anaeromyxobacter dehalogenans 2CP-C, complete genomebiotin synthase1e-40167
NC_013790:2690740:270822827082282709208981Methanobrevibacter ruminantium M1 chromosome, complete genomebiotin synthase BioB11e-40167
NC_018645:4490957:449147144914714492445975Desulfobacula toluolica Tol2, complete genomebiotin synthase BioB5e-40165
NC_017281:1645903:164590316459031646739837Campylobacter jejuni subsp. jejuni S3 chromosome, complete genomebiotin synthase5e-40164
NC_003912:1742370:174237017423701743206837Campylobacter jejuni RM1221, complete genomebiotin synthase5e-40164
NC_017279:1603916:160391616039161604752837Campylobacter jejuni subsp. jejuni IA3902 chromosome, completeputative biotin synthase1e-39164
NC_013173:1231213:123151212315121232480969Desulfomicrobium baculatum DSM 4028, complete genomebiotin synthase3e-39162
NC_013947:460398:4892724892724903361065Stackebrandtia nassauensis DSM 44728 chromosome, complete genomebiotin synthase4e-39161
NC_013131:5226919:5228922522892252300221101Catenulispora acidiphila DSM 44928, complete genomebiotin synthase1e-35150
NC_015636:288797:288797288797289777981Methanothermococcus okinawensis IH1 chromosome, complete genomeBiotin synthase2e-33143
NC_013407:10953:2419324193252781086Methanocaldococcus vulcanius M7, complete genomeRadical SAM domain protein6e-1581.6
NC_014658:743453:7460077460077470261020Methanothermus fervidus DSM 2088 chromosome, complete genomeradical sam domain protein1e-1480.5
NC_008262:2649289:2679481267948126805241044Clostridium perfringens SM101, complete genomeradical SAM domain protein1e-1170.9
NC_016627:1807866:1814917181491718162691353Clostridium clariflavum DSM 19732 chromosome, complete genomeiron-only hydrogenase maturation protein HydE3e-1169.7
NC_011296:1636242:164945716494571650449993Thermodesulfovibrio yellowstonii DSM 11347, complete genomebiotin synthase family enzyme4e-0962.8
NC_009437:538792:5546655546655557411077Caldicellulosiruptor saccharolyticus DSM 8903, complete genomebiotin synthase5e-0962
NC_015565:1647554:1663319166331916644101092Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeRadical SAM domain-containing protein9e-0754.7
NC_021182:2965395:2965395296539529664621068Clostridium pasteurianum BC1, complete genomeiron-only hydrogenase maturation rSAM protein HydE1e-0654.7
NC_008942:1768588:1785986178598617870351050Methanocorpusculum labreanum Z, complete genomePrephenate dehydratase-like protein1e-0654.3