Pre_GI: BLASTP Hits

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Query: NC_002971:780502:785938 Coxiella burnetii RSA 493, complete genome

Start: 785938, End: 786924, Length: 987

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011528:647401:653829653829654815987Coxiella burnetii CbuK_Q154, complete genomemethyltransferase0674
NC_011527:1113217:112673911267391127725987Coxiella burnetii CbuG_Q212, complete genomemethyltransferase0667
NC_010117:980313:993833993833994714882Coxiella burnetii RSA 331, complete genomeputative methyltransferase5e-172603
NC_008346:800500:815015815015815617603Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein1e-65250
NC_014820:1057826:1060918106091810620901173Cenarchaeum symbiosum A, complete genomeSAM dependent methyltransferase3e-40166
NC_016830:530397:551588551588552316729Pseudomonas fluorescens F113 chromosome, complete genomeSAM-dependent methyltransferase9e-1168.2
NC_015416:1872000:189281718928171893683867Methanosaeta concilii GP-6 chromosome, complete genomemethyltransferase domain family5e-0962
NC_014844:762794:772362772362773180819Desulfovibrio aespoeensis Aspo-2 chromosome, complete genometype 11 methyltransferase8e-0961.6
NC_011830:1288984:129762412976241298436813Desulfitobacterium hafniense DCB-2, complete genomeMethyltransferase type 112e-0860.1
NC_015660:1869962:188409818840981884898801Geobacillus thermoglucosidasius C56-YS93 chromosome, completetype 11 methyltransferase7e-0858.5
NC_010162:7899980:7914986791498679161551170Sorangium cellulosum 'So ce 56', complete genomeputative methyltransferase9e-0858.2
NC_011884:3881568:389205338920533892859807Cyanothece sp. PCC 7425, complete genomeMethyltransferase type 119e-0858.2
NC_014650:1862165:186521918652191866019801Geobacillus sp. Y4.1MC1 chromosome, complete genometype 11 methyltransferase8e-0858.2
NC_006510:591339:616525616525617319795Geobacillus kaustophilus HTA426, complete genomehypothetical protein8e-0858.2
NC_016593:596500:625253625253626047795Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetype 11 methyltransferase8e-0858.2
NC_016791:3891272:390336139033613904176816Clostridium sp. BNL1100 chromosome, complete genomemethylase involved in ubiquinone/menaquinone biosynthesis1e-0757.8
NC_016629:4081500:4089382408938240904521071Desulfovibrio africanus str. Walvis Bay chromosome, completetype 11 methyltransferase5e-0755.5
NC_013173:133466:1503251503251514161092Desulfomicrobium baculatum DSM 4028, complete genomeMethyltransferase type 111e-0654.3
NC_006663:1:100551005510789735Staphylococcus epidermidis RP62A plasmid pSERP, complete sequencemethyltransferase, UbiE/COQ5 family2e-0653.9
NC_009442:908507:927674927674928408735Streptococcus suis 05ZYH33 chromosome, complete genomehypothetical protein2e-0653.9
NC_016751:1979201:199973819997382000439702Marinitoga piezophila KA3 chromosome, complete genomemethylase2e-0653.9
NC_016791:3953972:398070439807043981519816Clostridium sp. BNL1100 chromosome, complete genomemethylase involved in ubiquinone/menaquinone biosynthesis1e-0653.9
NC_014328:2467239:248077824807782481515738Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative methyltransferase2e-0653.5
NC_014408:682689:695291695291696235945Methanothermobacter marburgensis str. Marburg chromosome, completemethyltransferase3e-0652.8
NC_011898:3367457:336745733674573368197741Clostridium cellulolyticum H10, complete genomeMethyltransferase type 118e-0651.6
NC_008380:855246:885045885045885887843Rhizobium leguminosarum bv. viciae 3841, complete genomehypothetical protein9e-0651.2
NC_011837:2605409:262189626218962622636741Clostridium kluyveri NBRC 12016, complete genomehypothetical protein9e-0651.2
NC_009706:2673906:269039326903932691133741Clostridium kluyveri DSM 555 chromosome, complete genomemethyltransferase9e-0651.2