Pre_GI: BLASTP Hits

Some Help

Query: NC_002971:619355:620938 Coxiella burnetii RSA 493, complete genome

Start: 620938, End: 621882, Length: 945

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010117:700112:701695701695702639945Coxiella burnetii RSA 331, complete genomeoxidoreductase, NAD-binding0653
NC_009727:670616:669687669687670631945Coxiella burnetii Dugway 7E9-12, complete genomeoxidoreductase, NAD-binding0651
NC_011527:1255998:128907812890781290022945Coxiella burnetii CbuG_Q212, complete genomeNADH-dependent dehydrogenase0651
NC_020304:2677372:2718359271835927194081050Desulfocapsa sulfexigens DSM 10523, complete genomeputative dehydrogenase1e-1274.3
NC_005945:3359598:3362071336207133631021032Bacillus anthracis str. Sterne, complete genomeoxidoreductase, Gfo/Idh/MocA family9e-1167.8
NC_007908:1328832:1339211133921113402601050Rhodoferax ferrireducens T118, complete genomeoxidoreductase-like2e-1066.6
NC_008817:709370:7209897209897220921104Prochlorococcus marinus str. MIT 9515, complete genomeputative oxidoreductase3e-0962.8
NC_016628:1190366:1190366119036611914061041Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceputative dehydrogenase6e-0962
NC_015320:470988:487417487417488322906Archaeoglobus veneficus SNP6 chromosome, complete genomeoxidoreductase domain-containing protein2e-0860.5
NC_010729:1179008:1188515118851511895251011Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein3e-0859.3
NC_011653:1339868:1351863135186313529451083Thermosipho africanus TCF52B, complete genomelipopolysaccharide biosynthesis protein BplA3e-0859.3
NC_014622:653599:6685976685976696731077Paenibacillus polymyxa SC2 chromosome, complete genomeoxidoreductase domain-containing protein4e-0859.3
NC_007103:291000:2975012975012985261026Bacillus cereus E33L plasmid pE33L466, complete sequencepossible myo-inositol 2-dehydrogenase4e-0859.3
NC_015703:5391478:5411452541145254124681017Runella slithyformis DSM 19594 chromosome, complete genomeoxidoreductase domain-containing protein6e-0858.5
NC_003413:748906:758735758735759685951Pyrococcus furiosus DSM 3638, complete genomeputative dehydrogenase9e-0857.8
NC_010803:2067539:209293120929312093929999Chlorobium limicola DSM 245, complete genomeoxidoreductase domain protein2e-0757
NC_016641:2225779:2241058224105822421341077Paenibacillus terrae HPL-003 chromosome, complete genomeoxidoreductase domain-containing protein3e-0756.2
NC_006177:2883476:2887545288754528886301086Symbiobacterium thermophilum IAM 14863, complete genomeputative oxidoreductase3e-0755.8
NC_015709:1459838:1505104150510415061771074Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeoxidoreductase domain-containing protein3e-0755.8
NC_012803:1094679:1107565110756511086951131Micrococcus luteus NCTC 2665, complete genomepredicted dehydrogenase4e-0755.8
NC_015177:2559903:256047125604712561454984Pedobacter saltans DSM 12145 chromosome, complete genomeoxidoreductase domain protein4e-0755.5
NC_012881:4055962:4069916406991640709231008Desulfovibrio salexigens DSM 2638, complete genomeoxidoreductase domain protein5e-0755.5
NC_008593:980731:9882909882909894021113Clostridium novyi NT, complete genomelipopolysaccharide biosynthesis protein6e-0755.1
NC_009328:1903291:1921974192197419229961023Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeoxidoreductase, NAD-binding1e-0654.3
NC_012804:2017531:203739720373972038347951Thermococcus gammatolerans EJ3, complete genomeOxidoreductase, substrate unknown2e-0653.5
NC_009328:1903291:192804819280481929037990Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeoxidoreductase3e-0653.1
NC_015520:224136:2383092383092393611053Mahella australiensis 50-1 BON chromosome, complete genomeoxidoreductase domain-containing protein3e-0652.8
NC_015145:3657103:3663735366373536648411107Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomedehydrogenase3e-0652.8
NC_021066:1712905:1717114171711417181961083Raoultella ornithinolytica B6, complete genomeoxidoreductase domain-containing protein4e-0652.8
NC_020995:751311:7672057672057683651161Enterococcus casseliflavus EC20, complete genomehypothetical protein4e-0652.4
NC_016584:5305417:5325285532528553274322148Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein5e-0652
NC_014758:310394:312634312634313602969Calditerrivibrio nitroreducens DSM 19672 chromosome, completeoxidoreductase domain protein5e-0652
NC_013171:1731491:1737249173724917384181170Anaerococcus prevotii DSM 20548, complete genomeoxidoreductase domain protein7e-0651.6