Pre_GI: BLASTP Hits

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Query: NC_002971:1379567:1381828 Coxiella burnetii RSA 493, complete genome

Start: 1381828, End: 1382187, Length: 360

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Causes Q-fever. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010117:1461502:146240914624091462768360Coxiella burnetii RSA 331, complete genomeribosome-binding factor A5e-62235
NC_011528:535680:551729551729552088360Coxiella burnetii CbuK_Q154, complete genomeribosome-binding factor A5e-62235
NC_011527:525759:545092545092545451360Coxiella burnetii CbuG_Q212, complete genomeribosome-binding factor A1e-61234
NC_013861:311908:331330331330331695366Legionella longbeachae NSW150, complete genomeRibosome-binding factor A3e-21100
NC_004129:957890:976043976043976444402Pseudomonas fluorescens Pf-5, complete genomeribosome-binding factor A9e-2199
NC_014152:1430156:144493014449301445292363Thermincola sp. JR, complete genomeribosome-binding factor A6e-2095.9
NC_006369:3058000:306698330669833067354372Legionella pneumophila str. Lens, complete genomeRibosome-binding factor A2e-1891.3
NC_021150:4311902:431882743188274319216390Azotobacter vinelandii CA6, complete genomeribosome-binding factor A4e-1787
NC_012560:4311906:431883143188314319220390Azotobacter vinelandii DJ, complete genomeribosome-binding factor A4e-1787
NC_012880:3915500:391701339170133917411399Dickeya dadantii Ech703, complete genomeribosome-binding factor A1e-1684.7
NC_004461:921364:951699951699952049351Staphylococcus epidermidis ATCC 12228, complete genomeribosome-binding factor A1e-1581.6
NC_010336:996661:102532410253241025755432Francisella philomiragia subsp. philomiragia ATCC 25017, completeribosome-binding factor A1e-1581.3
NC_014103:3985897:399506039950603995425366Bacillus megaterium DSM319 chromosome, complete genomeribosome-binding factor A2e-1581.3
NC_015696:517941:546773546773547204432Francisella sp. TX077308 chromosome, complete genomeribosome-binding factor A3e-1580.5
NC_008054:1117703:113319111331911133553363Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeRibosome-binding factor A3e-1580.5
NC_014727:1292213:131076513107651311127363Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,ribosome-binding factor a3e-1580.5
NC_009483:2201986:220643722064372206805369Geobacter uraniireducens Rf4 chromosome, complete genomeribosome-binding factor A7e-1579.3
NC_017341:1291583:130519813051981305590393Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,ribosome-binding factor A (P15B PROTEIN)1e-1479
NC_011772:3787500:379458137945813794937357Bacillus cereus G9842, complete genomeribosome-binding factor A8e-1579
NC_010184:3675424:368290436829043683260357Bacillus weihenstephanensis KBAB4, complete genomeribosome-binding factor A8e-1579
NC_004722:3777907:378498037849803785336357Bacillus cereus ATCC 14579, complete genomeribosome-binding factor A8e-1579
NC_011725:3821789:382886538288653829221357Bacillus cereus B4264 chromosome, complete genomeribosome-binding factor A8e-1579
NC_014171:3701051:370812537081253708481357Bacillus thuringiensis BMB171 chromosome, complete genomeribosome-binding factor A8e-1579
NC_017208:3816753:382421538242153824571357Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeribosome-binding factor A8e-1579
NC_017338:1234077:124542512454251245775351Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeribosome-binding factor A (P15B PROTEIN)1e-1478.6
NC_009782:1327340:134099713409971341347351Staphylococcus aureus subsp. aureus Mu3, complete genomeribosome-binding factor A1e-1478.6
NC_002952:1291444:130510213051021305452351Staphylococcus aureus subsp. aureus MRSA252, complete genomeribosome-binding factor A1e-1478.6
NC_007622:1214629:122828712282871228637351Staphylococcus aureus RF122, complete genomeribosome-binding factor A1e-1478.6
NC_012121:897866:915362915362915709348Staphylococcus carnosus subsp. carnosus TM300, complete genomeputative ribosome-binding factor A1e-1478.2
NC_017353:1699652:170622417062241706571348Staphylococcus lugdunensis N920143, complete genomeputative ribosome-binding factor A2e-1477.4
NC_013943:1381000:139257613925761392908333Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeribosome-binding factor A3e-1477
NC_006570:24636:532435324353674432Francisella tularensis subsp. tularensis Schu 4, complete genomeRibosome-binding factor A4e-1476.6
NC_007880:1703346:174115917411591741590432Francisella tularensis subsp. holarctica, complete genomeRibosome-binding factor A4e-1476.6
NC_008369:1702885:174078917407891741220432Francisella tularensis subsp. holarctica OSU18, complete genomeribosome-binding factor A4e-1476.6
NC_009749:1699152:173705617370561737487432Francisella tularensis subsp. holarctica FTA, complete genomeribosome-binding factor A4e-1476.6
NC_010677:96470:125092125092125523432Francisella tularensis subsp. mediasiatica FSC147, complete genomeribosome-binding factor A4e-1476.6
NC_008245:24652:532595325953690432Francisella tularensis subsp. tularensis FSC 198, complete genomeRibosome-binding factor A4e-1476.6
NC_011773:3651963:365903636590363659392357Bacillus cereus AH820 chromosome, complete genomeribosome-binding factor A4e-1476.6
NC_011969:3549000:355615835561583556514357Bacillus cereus Q1 chromosome, complete genomeribosome-binding factor a4e-1476.6
NC_003909:3587695:359688335968833597239357Bacillus cereus ATCC 10987, complete genomeribosome-binding factor A4e-1476.6
NC_009257:109528:138144138144138575432Francisella tularensis subsp. tularensis WY96-3418 chromosome,ribosome-binding factor A4e-1476.6
NC_016933:24654:532615326153692432Francisella tularensis TIGB03 chromosome, complete genomeRibosome-binding factor A4e-1476.6
NC_016937:24654:532615326153692432Francisella tularensis subsp. tularensis TI0902 chromosome,ribosome-binding factor A4e-1476.6
NC_017200:3655496:366588236658823666238357Bacillus thuringiensis serovar finitimus YBT-020 chromosome,ribosome-binding factor A4e-1476.6
NC_008601:1733940:177265817726581773089432Francisella tularensis subsp. novicida U112, complete genomeribosome-binding factor A4e-1476.6
NC_009674:2551759:255888025588802559236357Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeribosome-binding factor A4e-1476.6
NC_016779:3579743:358681635868163587172357Bacillus cereus F837/76 chromosome, complete genomeRibosome-binding factor A4e-1476.6
NC_008600:3643905:365097836509783651334357Bacillus thuringiensis str. Al Hakam, complete genomeribosome-binding factor A4e-1476.6
NC_014335:3567931:357500435750043575360357Bacillus cereus biovar anthracis str. CI chromosome, completeribosome-binding factor A4e-1476.6
NC_005957:3638750:364582336458233646179357Bacillus thuringiensis serovar konkukian str. 97-27, completeribosome-binding factor A4e-1476.6
NC_006274:3697255:370470537047053705061357Bacillus cereus E33L, complete genomeribosome-binding factor A4e-1476.6
NC_012472:3661912:366898536689853669341357Bacillus cereus 03BB102, complete genomeribosome-binding factor A4e-1476.6
NC_005945:3615623:362484736248473625203357Bacillus anthracis str. Sterne, complete genomeribosome-binding factor A8e-1475.9
NC_003997:3617000:362415236241523624508357Bacillus anthracis str. Ames, complete genomeribosome-binding factor A8e-1475.9
NC_007530:3616828:362427936242793624635357Bacillus anthracis str. 'Ames Ancestor', complete genomeribosome-binding factor A8e-1475.9
NC_012659:3617000:362417936241793624535357Bacillus anthracis str. A0248, complete genomeribosome-binding factor A8e-1475.9
NC_015589:1899329:191995519199551920317363Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeribosome-binding factor A8e-1475.9
NC_007907:2879568:288240728824072882784378Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-1475.9
NC_011830:3904034:390969439096943910071378Desulfitobacterium hafniense DCB-2, complete genomeribosome-binding factor A7e-1475.9
NC_011658:3603009:361219636121963612552357Bacillus cereus AH187 chromosome, complete genomeribosome-binding factor A1e-1375.5
NC_016771:3555506:356469335646933565049357Bacillus cereus NC7401, complete genomeribosome-binding factor A1e-1375.5
NC_016603:3475843:348437734843773484778402Acinetobacter calcoaceticus PHEA-2 chromosome, complete genomeribosome-binding factor A9e-1475.5
NC_007645:1245927:125429212542921254699408Hahella chejuensis KCTC 2396, complete genomeribosome-binding factor A1e-1375.1
NC_016627:2799453:281620028162002816547348Clostridium clariflavum DSM 19732 chromosome, complete genomeribosome-binding factor A1e-1375.1
NC_013016:1257942:126421012642101264581372Neisseria meningitidis alpha14 chromosome, complete genomeribosome-binding factor A2e-1374.3
NC_013216:3376186:338631833863183386677360Desulfotomaculum acetoxidans DSM 771, complete genomeribosome-binding factor A3e-1373.9
NC_008527:740060:761825761825762184360Lactococcus lactis subsp. cremoris SK11, complete genomeRibosome-binding factor A3e-1373.9
NC_019435:747162:768930768930769289360Lactococcus lactis subsp. cremoris UC509.9, complete genomeribosome-binding factor A3e-1373.9
NC_017505:1338661:134487613448761345247372Neisseria meningitidis alpha710 chromosome, complete genomeribosomal-binding factor A2e-1373.9
NC_017511:950411:954043954043954414372Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeribosome-binding factor A4e-1373.6
NC_002946:618439:634076634076634447372Neisseria gonorrhoeae FA 1090, complete genomeribosome-binding factor A4e-1373.6
NC_003116:1488576:149217314921731492544372Neisseria meningitidis Z2491, complete genomeribosome-binding factor A4e-1373.2
NC_017512:1264542:126813912681391268510372Neisseria meningitidis WUE 2594, complete genomeribosome-binding factor A4e-1373.2
NC_017517:1377617:138189313818931382264372Neisseria meningitidis M01-240355 chromosome, complete genomeribosome-binding factor A4e-1373.2
NC_011035:1033942:103821310382131038584372Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeribosome-binding factor A5e-1372.8
NC_011295:847903:849080849080849493414Coprothermobacter proteolyticus DSM 5265, complete genomeribosome-binding factor A6e-1372.8
NC_009009:1876367:189090518909051891255351Streptococcus sanguinis SK36, complete genomeRibosome-binding factor A, putative9e-1372.4
NC_017516:917817:932901932901933272372Neisseria meningitidis H44/76 chromosome, complete genomeribosome-binding factor A7e-1372.4
NC_009465:29735:583015830158645345Candidatus Vesicomyosocius okutanii HA, complete genomeribosome-binding factor A7e-1372.4
NC_009253:2139379:214653921465392146901363Desulfotomaculum reducens MI-1 chromosome, complete genomeribosome-binding factor A1e-1272
NC_002528:404545:415223415223415585363Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeribosome-binding factor A1e-1271.6
NC_019970:1343670:135106213510621351421360Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeribosome-binding factor A2e-1271.2
NC_014909:86000:120346120346120714369Candidatus Blochmannia vafer str. BVAF chromosome, complete genomeribosome-binding factor A2e-1271.2
NC_005139:2731623:274573327457332746179447Vibrio vulnificus YJ016 chromosome I, complete sequenceribosome-binding factor A3e-1270.5
NC_004459:1679335:168215816821581682553396Vibrio vulnificus CMCP6 chromosome I, complete sequenceribosome-binding factor A3e-1270.5
NC_014965:670115:674450674450674845396Vibrio vulnificus MO6-24/O chromosome I, complete sequenceribosome-binding factor A3e-1270.5
NC_014098:1553900:155354415535441553903360Bacillus tusciae DSM 2912 chromosome, complete genomeribosome-binding factor A3e-1270.5
NC_005061:96536:115697115697116050354Candidatus Blochmannia floridanus, complete genomeribosome-binding factor A (P15B protein)3e-1270.5
NC_021175:1597613:161702316170231617373351Streptococcus oligofermentans AS 1.3089, complete genomeribosome-binding factor A4e-1270.1
NC_015672:1566565:157549715754971575859363Flexistipes sinusarabici DSM 4947 chromosome, complete genomeribosome-binding factor A5e-1269.7
NC_014657:944000:958401958401958802402Caldicellulosiruptor owensensis OL chromosome, complete genomeribosome-binding factor a8e-1268.9
NC_011898:513835:526895526895527248354Clostridium cellulolyticum H10, complete genomeribosome-binding factor A1e-1168.6
NC_020075:114790:128230128230128589360Candidatus Blochmannia chromaiodes str. 640, complete genomeribosome-binding factor A3e-1167.4
NC_010001:3369500:337667333766733377083411Clostridium phytofermentans ISDg, complete genomeribosome-binding factor A2e-1167.4
NC_016893:563890:578339578339578692354Wigglesworthia glossinidia endosymbiont of Glossina morsitans30s ribosome binding factor4e-1166.6
NC_017179:1378875:139060613906061390986381Clostridium difficile BI1, complete genomeribosome-binding factor A5e-1166.2
NC_013315:1370000:138083213808321381212381Clostridium difficile CD196 chromosome, complete genomeribosome-binding factor A5e-1166.2
NC_020134:1173000:118242711824271182777351Clostridium stercorarium subsp. stercorarium DSM 8532, completeribosome-binding factor A7e-1165.9
NC_014218:696409:699758699758700246489Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomeribosome-binding factor A7e-1165.9
NC_011999:936500:946062946062946406345Macrococcus caseolyticus JCSC5402, complete genomeribosome-binding factor A7e-1165.9
NC_004344:257471:264696264696265073378Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1065.5
NC_014387:1175927:118944811894481189876429Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeribosome-binding factor A RbfA1e-1065.1
NC_017259:388000:397892397892398251360Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,ribosome-binding factor A2e-1064.7
NC_013939:1535071:154394815439481544295348Deferribacter desulfuricans SSM1, complete genomeribosome-binding factor A2e-1064.3
NC_016632:74569:843838438384793411Serratia symbiotica str. 'Cinara cedri' chromosome, completeribosome-binding factor A4e-1063.5
NC_015318:706374:718307718307718708402Hippea maritima DSM 10411 chromosome, complete genomeRibosome-binding factor A4e-1063.5
NC_004545:392685:396349396349396723375Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomeribosome-binding factor A4e-1063.5
NC_014376:3214222:322095932209593221321363Clostridium saccharolyticum WM1 chromosome, complete genomeribosome-binding factor A6e-1062.8
NS_000191:344000:355932355932356297366Uncultured Termite group 1 bacterium phylotype Rs-D17, completeribosome-binding factor A1e-0962
NC_020419:344000:355932355932356297366Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completeribosome-binding factor A1e-0962
NC_015144:2053969:207601220760122076371360Weeksella virosa DSM 16922 chromosome, complete genomeribosome-binding factor A1e-0962
NC_013170:917177:918174918174918530357Cryptobacterium curtum DSM 15641, complete genomeribosome-binding factor A1e-0962
NC_012658:2584355:260629526062952606657363Clostridium botulinum Ba4 str. 657 chromosome, complete genomeribosome-binding factor A2e-0961.6
NC_010516:2511035:253632225363222536684363Clostridium botulinum B1 str. Okra, complete genomeribosome-binding factor A2e-0961.2
NC_008262:1835613:185091218509121851262351Clostridium perfringens SM101, complete genomeribosome-binding factor A2e-0961.2
NC_020291:1464500:147258414725841472934351Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeribosome-binding factor A2e-0961.2
NC_012563:2721658:272261027226102722972363Clostridium botulinum A2 str. Kyoto, complete genomeribosome-binding factor A2e-0961.2
NC_009495:2524000:254809925480992548461363Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeribosome-binding factor A2e-0961.2
NC_009697:2394826:242012224201222420484363Clostridium botulinum A str. ATCC 19397 chromosome, completeribosome-binding factor A2e-0961.2
NC_009698:2367171:239246723924672392829363Clostridium botulinum A str. Hall chromosome, complete genomeribosome-binding factor A2e-0961.2
NC_013222:817686:822358822358822765408Robiginitalea biformata HTCC2501, complete genomeribosome-binding factor A4e-0960.1
NC_010520:2585014:261085326108532611215363Clostridium botulinum A3 str. Loch Maree, complete genomeribosome-binding factor A5e-0959.7
NC_015703:4483500:448365844836584484035378Runella slithyformis DSM 19594 chromosome, complete genomeribosome-binding factor A4e-0856.6
NC_015164:2859000:286559528655952865930336Bacteroides salanitronis DSM 18170 chromosome, complete genomeribosome-binding factor A7e-0855.8
NC_010741:949732:968837968837969217381Treponema pallidum subsp. pallidum SS14, complete genomeribosome-binding factor A1e-0755.5
NC_000919:948287:967392967392967772381Treponema pallidum subsp. pallidum str. Nichols, complete genomeribosome-binding factor A (rbfA)1e-0755.5
NC_016844:950231:969336969336969716381Treponema pallidum subsp. pallidum DAL-1 chromosome, completeribosome-binding factor A1e-0755.5
NC_017268:949543:968648968648969028381Treponema pallidum subsp. pallidum str. Chicago chromosome,ribosome-binding factor A1e-0755.5
NC_021508:949769:968874968874969254381Treponema pallidum subsp. pallidum SS14, complete genomeribosome-binding factor A1e-0755.5
NC_015311:510661:518391518391518726336Prevotella denticola F0289 chromosome, complete genomeribosome-binding factor A3e-0753.9
NC_015064:3370840:338619033861903386618429Acidobacterium sp. MP5ACTX9 chromosome, complete genomeribosome-binding factor A1e-0652
NC_011244:863306:871126871126871515390Borrelia recurrentis A1, complete genomeribosome-binding factor A1e-0651.6
NC_011728:832073:843138843138843500363Borrelia burgdorferi ZS7, complete genomeribosome-binding factor A5e-0650.1