Pre_GI: BLASTN Hits

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Query: NC_002953:303223 Staphylococcus aureus subsp. aureus MSSA476, complete genome

Start: 303223, End: 326888, Length: 23666

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a hyper-virulent community acquired methicillin-susceptible (MSSA) strain isolated in the United Kingdom. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. Continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002745:32593232593234830022369Staphylococcus aureus subsp. aureus N315, complete genome014760BLASTN svgBLASTP svg
NC_009782:32589232589234826022369Staphylococcus aureus subsp. aureus Mu3, complete genome014750BLASTN svgBLASTP svg
NC_002758:32588932588934825722369Staphylococcus aureus subsp. aureus Mu50, complete genome014750BLASTN svgBLASTP svg
NC_007622:27167327167329431622644Staphylococcus aureus RF122, complete genome014550BLASTN svgBLASTP svg
NC_003212:57061*5706110108744027Listeria innocua Clip11262, complete genome2e-53218BLASTN svgBLASTP svg
NC_002973:72328*723289511822791Listeria monocytogenes str. 4b F2365, complete genome7e-44186BLASTN svgBLASTP svg
NC_016011:59070*590708009921030Listeria ivanovii subsp. ivanovii PAM 55, complete genome1e-36163BLASTN svgBLASTP svg
NC_020291:23185323185325026518413Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome9e-28133BLASTN svgBLASTP svg
NC_021175:155152*15515217951724366Streptococcus oligofermentans AS 1.3089, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002758:25153102515310253840923100Staphylococcus aureus subsp. aureus Mu50, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002951:24480002448000246790519906Staphylococcus aureus subsp. aureus COL, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002953:24356672435667245828222616Staphylococcus aureus subsp. aureus MSSA476, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003923:24601302460130247911318984Staphylococcus aureus subsp. aureus MW2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007793:25108012510801252978718987Staphylococcus aureus subsp. aureus USA300, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007795:24554682455468247857023103Staphylococcus aureus subsp. aureus NCTC 8325, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009782:25193792519379253836318985Staphylococcus aureus subsp. aureus Mu3, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010079:25109512510951252993718987Staphylococcus aureus subsp. aureus USA300_TCH1516, complete3e-0661.9BLASTN svgBLASTP svg
NC_021171:42774844277484429909921616Bacillus sp. 1NLA3E, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002745:24467222446722246570618985Staphylococcus aureus subsp. aureus N315, complete genome3e-0661.9BLASTN svgBLASTP svg