Pre_GI: BLASTN Hits

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Query: NC_002952:2390668 Staphylococcus aureus subsp. aureus MRSA252, complete genome

Start: 2390668, End: 2419767, Length: 29100

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a hospital-acquired strain isolated in the United Kingdom, representative of the methicillin-resistant (MRSA) strains. It is one of the two major MRSA strains found in British hospitals in the late 1990's. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. Continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002953:2282236*2282236231132529090Staphylococcus aureus subsp. aureus MSSA476, complete genome026380BLASTN svgBLASTP svg
NC_007622:2239799*2239799227094331145Staphylococcus aureus RF122, complete genome026300BLASTN svgBLASTP svg
NC_009782:2362000*2362000237977917780Staphylococcus aureus subsp. aureus Mu3, complete genome025950BLASTN svgBLASTP svg
NC_007793:2352953*2352953237101718065Staphylococcus aureus subsp. aureus USA300, complete genome025350BLASTN svgBLASTP svg
NC_003923:2301234*2301234231971018477Staphylococcus aureus subsp. aureus MW2, complete genome025350BLASTN svgBLASTP svg
NC_002951:2288674*2288674230711718444Staphylococcus aureus subsp. aureus COL, complete genome025270BLASTN svgBLASTP svg
NC_010079:2352691*2352691237059917909Staphylococcus aureus subsp. aureus USA300_TCH1516, complete024240BLASTN svgBLASTP svg
NC_007795:2299327*2299327231711417788Staphylococcus aureus subsp. aureus NCTC 8325, complete genome024000BLASTN svgBLASTP svg
NC_002758:2359329*2359329237711617788Staphylococcus aureus subsp. aureus Mu50, complete genome023970BLASTN svgBLASTP svg
NC_002745:2289829*2289829230761617788Staphylococcus aureus subsp. aureus N315, complete genome023970BLASTN svgBLASTP svg
NC_004461:1849176*1849176187898629811Staphylococcus epidermidis ATCC 12228, complete genome015810BLASTN svgBLASTP svg
NC_020164:701151*70115172886827718Staphylococcus warneri SG1, complete genome013990BLASTN svgBLASTP svg
NC_002976:1844901*1844901187401629116Staphylococcus epidermidis RP62A, complete genome013190BLASTN svgBLASTP svg
NC_007168:813957*81395783855024594Staphylococcus haemolyticus JCSC1435, complete genome012510BLASTN svgBLASTP svg
NC_013893:830282*83028285359923318Staphylococcus lugdunensis HKU09-01 chromosome, complete genome08915BLASTN svgBLASTP svg
NC_007350:692041*69204171972727687Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,08631BLASTN svgBLASTP svg
NC_014925:1970500*1970500198985319354Staphylococcus pseudintermedius HKU10-03 chromosome, complete08189BLASTN svgBLASTP svg
NC_012121:1728913*1728913174659917687Staphylococcus carnosus subsp. carnosus TM300, complete genome07053BLASTN svgBLASTP svg
NC_011999:198769*19876922025721489Macrococcus caseolyticus JCSC5402, complete genome01612BLASTN svgBLASTP svg
NC_008555:2597980*2597980262082422845Listeria welshimeri serovar 6b str. SLCC5334, complete genome2e-75291BLASTN svgBLASTP svg
NC_013656:2382000*2382000240458622587Lactococcus lactis subsp. lactis KF147, complete genome5e-73283BLASTN svgBLASTP svg
NC_004668:191732*19173221421422483Enterococcus faecalis V583, complete genome3e-68268BLASTN svgBLASTP svg
NC_020995:245671*24567126941823748Enterococcus casseliflavus EC20, complete genome1e-64256BLASTN svgBLASTP svg
NC_004193:119737*11973716514845412Oceanobacillus iheyensis HTE831, complete genome2e-53218BLASTN svgBLASTP svg
NC_015391:2523451*2523451255656933119Carnobacterium sp. 17-4 chromosome, complete genome2e-51212BLASTN svgBLASTP svg
NC_018704:124823*12482314364118819Amphibacillus xylanus NBRC 15112, complete genome6e-45190BLASTN svgBLASTP svg
NC_015516:131564*13156415661425051Melissococcus plutonius ATCC 35311, complete genome2e-41178BLASTN svgBLASTP svg
NC_014829:133305*13330517500741703Bacillus cellulosilyticus DSM 2522 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_011134:51218*512187644125224Streptococcus equi subsp. zooepidemicus str. MGCS10565, complete2e-35159BLASTN svgBLASTP svg
NC_012471:51305*513057507523771Streptococcus equi subsp. equi 4047, complete genome1e-33153BLASTN svgBLASTP svg
NC_015601:1229909*1229909125272022812Erysipelothrix rhusiopathiae str. Fujisawa, complete genome5e-33151BLASTN svgBLASTP svg
NC_015555:327562*32756238328255721Thermoanaerobacterium xylanolyticum LX-11 chromosome, complete3e-31145BLASTN svgBLASTP svg
NC_007929:1463295*1463295150502641732Lactobacillus salivarius subsp. salivarius UCC118, complete genome3e-28135BLASTN svgBLASTP svg
NC_015275:3846260*3846260387224625987Clostridium lentocellum DSM 5427 chromosome, complete genome1e-27133BLASTN svgBLASTP svg
NC_014209:1910109*1910109194573835630Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,2e-26129BLASTN svgBLASTP svg
NC_013921:1977444*1977444203224454801Thermoanaerobacter italicus Ab9 chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_014964:388458*38845844542856971Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete1e-24123BLASTN svgBLASTP svg
NC_015958:2251619*2251619232072969111Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genome1e-24123BLASTN svgBLASTP svg
NC_014410:403776*40377646022156446Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,4e-24121BLASTN svgBLASTP svg
NC_006448:1709523*1709523173288623364Streptococcus thermophilus LMG 18311, complete genome7e-23117BLASTN svgBLASTP svg
NC_012563:3956500*3956500399649139992Clostridium botulinum A2 str. Kyoto, complete genome3e-22115BLASTN svgBLASTP svg
NC_010520:3788702*3788702382916340462Clostridium botulinum A3 str. Loch Maree, complete genome3e-22115BLASTN svgBLASTP svg
NC_010516:3759136*3759136379956240427Clostridium botulinum B1 str. Okra, complete genome3e-22115BLASTN svgBLASTP svg
NC_019970:336472*33647241533078859Thermoanaerobacterium thermosaccharolyticum M0795, complete genome1e-21113BLASTN svgBLASTP svg
NC_003366:2731995*2731995276168829694Clostridium perfringens str. 13, complete genome4e-21111BLASTN svgBLASTP svg
NC_008261:2957354*2957354298433226979Clostridium perfringens ATCC 13124, complete genome4e-21111BLASTN svgBLASTP svg
NC_008262:2598920*2598920264903950120Clostridium perfringens SM101, complete genome4e-21111BLASTN svgBLASTP svg
NC_015759:536929*53692955509918171Weissella koreensis KACC 15510 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_013406:6422000*6422000644307321074Paenibacillus sp. Y412MC10 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_006055:140686*14068617078530100Mesoplasma florum L1, complete genome1e-18103BLASTN svgBLASTP svg
NC_002162:268049*26804929736629318Ureaplasma parvum serovar 3 str. ATCC 700970, complete genome1e-18103BLASTN svgBLASTP svg
NC_010723:223935*22393527475150817Clostridium botulinum E3 str. Alaska E43, complete genome4e-18101BLASTN svgBLASTP svg
NC_003030:3251941*3251941329013838198Clostridium acetobutylicum ATCC 824, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_014448:487381*48738151116023780Mycoplasma hyorhinis HUB-1 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015687:3252233*3252233329176539533Clostridium acetobutylicum DSM 1731 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_009437:2367842*2367842241150043659Caldicellulosiruptor saccharolyticus DSM 8903, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_004557:2711702*2711702274444632745Clostridium tetani E88, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_004829:64000*640008360419605Mycoplasma gallisepticum R, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014760:299392*29939232976830377Mycoplasma bovis PG45 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015725:670719*67071969912728409Mycoplasma bovis Hubei-1 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014614:2295131*2295131232283227702Clostridium sticklandii, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_012781:379200*37920039812018921Eubacterium rectale ATCC 33656, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007716:517356*51735654065723302Aster yellows witches'-broom phytoplasma AYWB, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_002952:13490061349006137209923094Staphylococcus aureus subsp. aureus MRSA252, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014393:4482896*4482896452909946204Clostridium cellulovorans 743B chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014921:688978*68897871809929122Mycoplasma fermentans M64 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_018704:43340243340245651923118Amphibacillus xylanus NBRC 15112, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_021182:4557608*4557608459730239695Clostridium pasteurianum BC1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_014751:772912*77291280869035779Mycoplasma leachii PG50 chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007633:790881*79088182774836868Mycoplasma capricolum subsp. capricolum ATCC 27343, complete9e-1383.8BLASTN svgBLASTP svg
NC_013171:1677543*1677543171632938787Anaerococcus prevotii DSM 20548, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014657:1540500*1540500155862118122Caldicellulosiruptor owensensis OL chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014652:1032711*1032711107395141241Caldicellulosiruptor hydrothermalis 108 chromosome, complete6e-1177.8BLASTN svgBLASTP svg
NC_014392:969498*969498100915039653Caldicellulosiruptor obsidiansis OB47 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010001:4486170*4486170451730531136Clostridium phytofermentans ISDg, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014328:4387303*4387303445852771225Clostridium ljungdahlii ATCC 49587 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009012:3421000*3421000343886317864Clostridium thermocellum ATCC 27405, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009613:1505548*1505548152570320156Flavobacterium psychrophilum JIP02/86, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_009922:542500*54250057462332124Alkaliphilus oremlandii OhILAs, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010674:222016*22201625822836213Clostridium botulinum B str. Eklund 17B, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_014721:1777644*1777644181600538362Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete9e-1073.8BLASTN svgBLASTP svg
NC_015949:1180755*1180755121693036176Caldicellulosiruptor lactoaceticus 6A chromosome, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_020291:166500*16650019679930300Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome9e-1073.8BLASTN svgBLASTP svg
NC_003869:2143892*2143892219937255481Thermoanaerobacter tengcongensis MB4, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_005027:4180502*4180502420480624305Rhodopirellula baltica SH 1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_012806:105133*10513314579440662Mycoplasma conjunctivae, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_014752:98117*9811712709928983Neisseria lactamica ST-640, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015061:366552*36655238559319042Rahnella sp. Y9602 chromosome, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009089:87581*8758110818120601Clostridium difficile 630, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012034:1783912*1783912182367039759Anaerocellum thermophilum DSM 6725, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013316:81969*8196911125629288Clostridium difficile R20291, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014720:1140765*1140765116059919835Caldicellulosiruptor kronotskyensis 2002 chromosome, complete1e-0869.9BLASTN svgBLASTP svg
NC_015520:2280643*2280643230563624994Mahella australiensis 50-1 BON chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018664:2357882*2357882238773229851Clostridium acidurici 9a chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015702:2505633*2505633252875923127Parachlamydia acanthamoebae UV7, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010376:186510*18651024309956590Finegoldia magna ATCC 29328, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_008255:3578883*3578883360220323321Cytophaga hutchinsonii ATCC 33406, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_002976:1361364*1361364138809126728Staphylococcus epidermidis RP62A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004461:1465397*1465397149093125535Staphylococcus epidermidis ATCC 12228, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010718:193231*19323123794944719Natranaerobius thermophilus JW/NM-WN-LF, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011898:874457*87445790039625940Clostridium cellulolyticum H10, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013192:232778*23277828299350216Leptotrichia buccalis DSM 1135, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_018748:181937*18193720540123465Emticicia oligotrophica DSM 17448 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020299:764526*76452681749952974Candidatus Kinetoplastibacterium oncopeltii TCC290E, complete2e-0765.9BLASTN svgBLASTP svg
NC_011567:238249*23824926341425166Anoxybacillus flavithermus WK1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014014:117925*11792514454326619Mycoplasma crocodyli MP145 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014377:112992*11299214783634845Thermosediminibacter oceani DSM 16646 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014538:1998180*1998180202679728618Thermoanaerobacter sp. X513 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015185:174847*17484719343818592Desulfurobacterium thermolithotrophum DSM 11699 chromosome,9e-0763.9BLASTN svgBLASTP svg
NC_015913:1491393*1491393153098039588Candidatus Arthromitus sp. SFB-mouse-Japan, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_011047:416566*41656644108124516Candidatus Phytoplasma mali, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013037:5263272*5263272529310829837Dyadobacter fermentans DSM 18053, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013162:1364888*1364888138809923212Capnocytophaga ochracea DSM 7271, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013771:1171251*1171251120363132381Cyanobacterium UCYN-A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014152:305955*30595532559919645Thermincola sp. JR, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015696:220798*22079825652935732Francisella sp. TX077308 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020134:2801199*2801199282265421456Clostridium stercorarium subsp. stercorarium DSM 8532, complete3e-0661.9BLASTN svgBLASTP svg
NC_005861:544280*54428056409919820Candidatus Protochlamydia amoebophila UWE25, complete genome3e-0661.9BLASTN svgBLASTP svg