Pre_GI: BLASTN Hits

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Query: NC_002952:1917999 Staphylococcus aureus subsp. aureus MRSA252, complete genome

Start: 1917999, End: 1941867, Length: 23869

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a hospital-acquired strain isolated in the United Kingdom, representative of the methicillin-resistant (MRSA) strains. It is one of the two major MRSA strains found in British hospitals in the late 1990's. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. Continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007622:1751500*1751500177342921930Staphylococcus aureus RF122, complete genome021260BLASTN svgBLASTP svg
NC_003923:1841500*1841500186443222933Staphylococcus aureus subsp. aureus MW2, complete genome019920BLASTN svgBLASTP svg
NC_002758:1880323*1880323190322422902Staphylococcus aureus subsp. aureus Mu50, complete genome017780BLASTN svgBLASTP svg
NC_002953:1819411*1819411184209922689Staphylococcus aureus subsp. aureus MSSA476, complete genome016890BLASTN svgBLASTP svg
NC_009782:1881722*1881722190409922378Staphylococcus aureus subsp. aureus Mu3, complete genome016820BLASTN svgBLASTP svg
NC_002745:1804000*1804000182484520846Staphylococcus aureus subsp. aureus N315, complete genome016720BLASTN svgBLASTP svg
NC_002951:1848684*1848684187248723804Staphylococcus aureus subsp. aureus COL, complete genome012940BLASTN svgBLASTP svg
NC_007793:1871165*1871165189479823634Staphylococcus aureus subsp. aureus USA300, complete genome012940BLASTN svgBLASTP svg
NC_010079:1871915*1871915189554823634Staphylococcus aureus subsp. aureus USA300_TCH1516, complete012940BLASTN svgBLASTP svg
NC_007795:1774725*1774725179848923765Staphylococcus aureus subsp. aureus NCTC 8325, complete genome012880BLASTN svgBLASTP svg
NC_004461:1465397*1465397149093125535Staphylococcus epidermidis ATCC 12228, complete genome01187BLASTN svgBLASTP svg
NC_002976:1361364*1361364138809126728Staphylococcus epidermidis RP62A, complete genome01179BLASTN svgBLASTP svg
NC_020164:1037979*1037979105773719759Staphylococcus warneri SG1, complete genome0763BLASTN svgBLASTP svg
NC_007168:1167454*1167454119908831635Staphylococcus haemolyticus JCSC1435, complete genome1e-174620BLASTN svgBLASTP svg
NC_018704:896209*89620992081324605Amphibacillus xylanus NBRC 15112, complete genome2e-47198BLASTN svgBLASTP svg
NC_008600:4509793*4509793453559925807Bacillus thuringiensis str. Al Hakam, complete genome3e-37165BLASTN svgBLASTP svg
NC_006274:4563455*4563455458739323939Bacillus cereus E33L, complete genome6e-35157BLASTN svgBLASTP svg
NC_012472:4515909*4515909454171025802Bacillus cereus 03BB102, complete genome4e-33151BLASTN svgBLASTP svg
NC_011772:4638000*4638000466192523926Bacillus cereus G9842, complete genome2e-32149BLASTN svgBLASTP svg
NC_007929:473500*47350049963926140Lactobacillus salivarius subsp. salivarius UCC118, complete genome6e-32147BLASTN svgBLASTP svg
NC_005945:4508304*4508304453209923796Bacillus anthracis str. Sterne, complete genome1e-30143BLASTN svgBLASTP svg
NC_010184:4532262*4532262455888726626Bacillus weihenstephanensis KBAB4, complete genome1e-26129BLASTN svgBLASTP svg
NC_005957:4502733*4502733452941126679Bacillus thuringiensis serovar konkukian str. 97-27, complete6e-26127BLASTN svgBLASTP svg
NC_003909:4484278*4484278451179927522Bacillus cereus ATCC 10987, complete genome5e-23117BLASTN svgBLASTP svg
NC_004193:2342528*2342528236730224775Oceanobacillus iheyensis HTE831, complete genome8e-19103BLASTN svgBLASTP svg
NC_005362:550823*55082357585325031Lactobacillus johnsonii NCC 533, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_004193:3325612*3325612334809922488Oceanobacillus iheyensis HTE831, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012891:1949882*1949882196941919538Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,3e-0971.9BLASTN svgBLASTP svg
NC_008530:469802*46980249214622345Lactobacillus gasseri ATCC 33323, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008525:664500*66450068827523776Pediococcus pentosaceus ATCC 25745, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_019978:875941*87594190079624856Halobacteroides halobius DSM 5150, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009922:2766397*2766397278959923203Alkaliphilus oremlandii OhILAs, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009725:28596302859630290030340674Bacillus amyloliquefaciens FZB42, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006814:1618588*1618588164662328036Lactobacillus acidophilus NCFM, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010080:1685280*1685280170653121252Lactobacillus helveticus DPC 4571, complete genome3e-0661.9BLASTN svgBLASTP svg