Pre_GI: BLASTN Hits

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Query: NC_002950:2098454 Porphyromonas gingivalis W83, complete genome

Start: 2098454, End: 2117489, Length: 19036

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015571:290355*29035531493124577Porphyromonas gingivalis TDC60, complete genome013230BLASTN svgBLASTP svg
NC_002950:12701321270132129604725916Porphyromonas gingivalis W83, complete genome02541BLASTN svgBLASTP svg
NC_002950:879930*87993091309933170Porphyromonas gingivalis W83, complete genome02539BLASTN svgBLASTP svg
NC_002950:20956920956923197022402Porphyromonas gingivalis W83, complete genome02539BLASTN svgBLASTP svg
NC_002950:1511955*1511955156159949645Porphyromonas gingivalis W83, complete genome02539BLASTN svgBLASTP svg
NC_015571:20440002044000210147957480Porphyromonas gingivalis TDC60, complete genome02438BLASTN svgBLASTP svg
NC_010729:1344903*1344903136284917947Porphyromonas gingivalis ATCC 33277, complete genome02405BLASTN svgBLASTP svg
NC_010729:225616*22561624523819623Porphyromonas gingivalis ATCC 33277, complete genome02389BLASTN svgBLASTP svg
NC_010729:2147268*2147268216760520338Porphyromonas gingivalis ATCC 33277, complete genome02375BLASTN svgBLASTP svg
NC_010729:10149571014957103460619650Porphyromonas gingivalis ATCC 33277, complete genome02375BLASTN svgBLASTP svg
NC_010729:14621351462135148658524451Porphyromonas gingivalis ATCC 33277, complete genome02373BLASTN svgBLASTP svg
NC_010729:619664*61966465510835445Porphyromonas gingivalis ATCC 33277, complete genome02371BLASTN svgBLASTP svg
NC_015571:2002489*2002489204114838660Porphyromonas gingivalis TDC60, complete genome02341BLASTN svgBLASTP svg
NC_010729:1549744*1549744156891619173Porphyromonas gingivalis ATCC 33277, complete genome02329BLASTN svgBLASTP svg
NC_010729:1179008*1179008120985230845Porphyromonas gingivalis ATCC 33277, complete genome02325BLASTN svgBLASTP svg
NC_015571:41115641115643280321648Porphyromonas gingivalis TDC60, complete genome02054BLASTN svgBLASTP svg
NC_015571:260664*26066427999219329Porphyromonas gingivalis TDC60, complete genome1e-20109BLASTN svgBLASTP svg
NC_002950:2068500*2068500208891120412Porphyromonas gingivalis W83, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_019968:382991*38299145725074260Prevotella dentalis DSM 3688 chromosome 2, complete sequence2e-1281.8BLASTN svgBLASTP svg
NC_014828:94391194391198509941189Ethanoligenens harbinense YUAN-3 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg