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Query: NC_002950:1270132 Porphyromonas gingivalis W83, complete genome

Start: 1270132, End: 1296047, Length: 25916

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015571:12070001207000122958422585Porphyromonas gingivalis TDC60, complete genome023560BLASTN svgBLASTP svg
NC_010729:10149571014957103460619650Porphyromonas gingivalis ATCC 33277, complete genome011220BLASTN svgBLASTP svg
NC_002950:879930*87993091309933170Porphyromonas gingivalis W83, complete genome02652BLASTN svgBLASTP svg
NC_002950:20956920956923197022402Porphyromonas gingivalis W83, complete genome02652BLASTN svgBLASTP svg
NC_002950:1511955*1511955156159949645Porphyromonas gingivalis W83, complete genome02652BLASTN svgBLASTP svg
NC_002950:20984542098454211748919036Porphyromonas gingivalis W83, complete genome02541BLASTN svgBLASTP svg
NC_015571:20440002044000210147957480Porphyromonas gingivalis TDC60, complete genome02492BLASTN svgBLASTP svg
NC_010729:1344903*1344903136284917947Porphyromonas gingivalis ATCC 33277, complete genome02454BLASTN svgBLASTP svg
NC_010729:225616*22561624523819623Porphyromonas gingivalis ATCC 33277, complete genome02440BLASTN svgBLASTP svg
NC_010729:619664*61966465510835445Porphyromonas gingivalis ATCC 33277, complete genome02434BLASTN svgBLASTP svg
NC_010729:2147268*2147268216760520338Porphyromonas gingivalis ATCC 33277, complete genome02426BLASTN svgBLASTP svg
NC_010729:14621351462135148658524451Porphyromonas gingivalis ATCC 33277, complete genome02422BLASTN svgBLASTP svg
NC_015571:2002489*2002489204114838660Porphyromonas gingivalis TDC60, complete genome02407BLASTN svgBLASTP svg
NC_015571:290355*29035531493124577Porphyromonas gingivalis TDC60, complete genome02387BLASTN svgBLASTP svg
NC_010729:1549744*1549744156891619173Porphyromonas gingivalis ATCC 33277, complete genome02381BLASTN svgBLASTP svg
NC_010729:1179008*1179008120985230845Porphyromonas gingivalis ATCC 33277, complete genome02375BLASTN svgBLASTP svg
NC_015571:41115641115643280321648Porphyromonas gingivalis TDC60, complete genome02095BLASTN svgBLASTP svg
NC_015501:1941851*1941851198059938749Porphyromonas asaccharolytica DSM 20707 chromosome, complete02058BLASTN svgBLASTP svg
NC_002950:1748582*1748582177154322962Porphyromonas gingivalis W83, complete genome0650BLASTN svgBLASTP svg
NC_019960:1198067*1198067122826330197Prevotella dentalis DSM 3688 chromosome 1, complete sequence5e-45190BLASTN svgBLASTP svg
NC_015311:2059879*2059879211653856660Prevotella denticola F0289 chromosome, complete genome6e-26127BLASTN svgBLASTP svg
NC_015571:1265121*1265121128814623026Porphyromonas gingivalis TDC60, complete genome1e-20109BLASTN svgBLASTP svg
NC_019968:382991*38299145725074260Prevotella dentalis DSM 3688 chromosome 2, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_010280:769639*76963979282723189Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010287:769600*76960079278823189Chlamydia trachomatis 434/Bu, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013061:717752*71775274137623625Pedobacter heparinus DSM 2366, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015744:769907*76990779249722591Chlamydia trachomatis L2c chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013416:820989*82098984592424936Aggregatibacter actinomycetemcomitans D11S-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003919:1716831*1716831175716240332Xanthomonas axonopodis pv. citri str. 306, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015578:39804963980496402949649001Treponema primitia ZAS-2 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012669:41182304118230414262824399Beutenbergia cavernae DSM 12333, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011751:12000*120003835526356Escherichia coli UMN026 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006833:637964*63796465659918636Wolbachia endosymbiont strain TRS of Brugia malayi, complete3e-0661.9BLASTN svgBLASTP svg