Pre_GI: BLASTP Hits

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Query: NC_002950:1981155:1999889 Porphyromonas gingivalis W83, complete genome

Start: 1999889, End: 2000836, Length: 948

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007929:653814:661023661023661913891Lactobacillus salivarius subsp. salivarius UCC118, complete genomeGTPase6e-31134
NC_010673:82586:965299652997470942Borrelia hermsii DAH, complete genomeGTPase3e-30132
NC_008710:79100:964539645397394942Borrelia turicatae 91E135, complete genomeGTPase4e-29128
NC_015637:819233:8325818325818336271047Vibrio anguillarum 775 chromosome chromosome II, complete sequenceGTPase1e-22107
NC_013959:1195249:1209531120953112105891059Sideroxydans lithotrophicus ES-1 chromosome, complete genomeGTPase EngC2e-24113
NC_011886:404661:4079224079224089441023Arthrobacter chlorophenolicus A6, complete genomeGTPase EngC4e-1685.9
NC_011757:1146608:1153975115397511550091035Methylobacterium chloromethanicum CM4, complete genomeGTPase EngC4e-1479.3
NC_010172:1079127:1085219108521910862531035Methylobacterium extorquens PA1, complete genomeGTPase EngC3e-1479.7
NC_010544:362033:363311363311364243933Candidatus Phytoplasma australiense, complete genomeGTPase EngC7e-24111
NC_013406:3874157:3873087387308738741601074Paenibacillus sp. Y412MC10 chromosome, complete genomeGTPase EngC5e-1995.5
NC_015953:4908069:4912014491201449130301017Streptomyces sp. SirexAA-E chromosome, complete genomeGTPase EngC1e-1584
NC_009380:3563421:356669435666943567479786Salinispora tropica CNB-440 chromosome, complete genomeGTPase EngC3e-0859.3
NC_013093:7222000:7237910723791072389441035Actinosynnema mirum DSM 43827, complete genomeGTPase EngC1e-1584.3
NC_018868:3229381:3232754323275432337941041Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeGTPase RsgA8e-34144
NC_017200:3701043:372066037206603721541882Bacillus thuringiensis serovar finitimus YBT-020 chromosome,GTPase RsgA3e-30132
NC_015875:1926981:192698119269811927859879Streptococcus pseudopneumoniae IS7493 chromosome, complete genomeGTPase RsgA2e-33142
NC_003450:788000:800205800205801089885Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein8e-1891.3
NC_009342:951761:960456960456961445990Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-1891.7
NC_011244:94756:108689108689109630942Borrelia recurrentis A1, complete genomehypothetical protein1e-30133
NC_016771:3599170:361680236168023617683882Bacillus cereus NC7401, complete genomehypothetical protein3e-30132
NC_012121:837586:839766839766840641876Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein6e-28124
NC_013665:918313:9454769454769465521077Methanocella paludicola SANAE, complete genomeprobable GTPase EngC2e-24113
NC_008054:1194000:120967312096731210566894Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completePutative GTP-binding protein6e-27121
NC_012808:806432:811357811357812349993Methylobacterium extorquens AM1, complete genomeputative GTPase7e-1478.2
NC_015760:2009425:200942520094252010297873Streptococcus salivarius CCHSS3, complete genomeputative GTPase engC3e-30132
NC_015873:1901939:192133019213301922193864Megasphaera elsdenii DSM 20460, complete genomeputative ribosome biogenesis GTPase RsgA8e-33141
NC_020134:2237421:223873222387322239616885Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative ribosome biogenesis GTPase RsgA1e-30134
NC_016048:4163225:4176270417627041773461077Oscillibacter valericigenes Sjm18-20, complete genomeputative ribosome biogenesis GTPase RsgA2e-25116
NC_020291:3900046:3918950391895039200231074Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative ribosome biogenesis GTPase RsgA 13e-22105
NC_018870:1417851:144051414405141441389876Thermacetogenium phaeum DSM 12270 chromosome, complete genomeribosome biogenesis GTPase RsgA7e-29127
NC_014934:2482934:250262325026232503576954Cellulophaga algicola DSM 14237 chromosome, complete genomeribosome biogenesis gtpase rsga5e-83308
NC_015500:1923514:195950219595021960458957Treponema brennaborense DSM 12168 chromosome, complete genomeribosome biogenesis GTPase RsgA4e-38158
NC_012691:2614603:2719878271987827209121035Tolumonas auensis DSM 9187, complete genomeribosome small subunit-dependent GTPase A6e-38158
NC_010184:3713359:373516737351673736048882Bacillus weihenstephanensis KBAB4, complete genomeribosome small subunit-dependent GTPase A6e-30131
NC_018524:1279156:1299259129925913003801122Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeribosome small subunit-dependent GTPase A7e-23108
NC_009483:936000:9421349421349432161083Geobacter uraniireducens Rf4 chromosome, complete genomeribosome small subunit-dependent GTPase A1e-21103
NC_007677:1354500:141023614102361411210975Salinibacter ruber DSM 13855, complete genomeribosome small subunit-dependent GTPase A4e-49195
NC_018515:3909646:392272339227233923613891Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeribosome small subunit-dependent GTPase A2e-36152
NC_016605:1033000:105169610516961052622927Pediococcus claussenii ATCC BAA-344 chromosome, complete genomeribosome small subunit-dependent GTPase A4e-32139
NC_016002:2453919:245610924561092456981873Pseudogulbenkiania sp. NH8B, complete genomeribosome small subunit-dependent GTPase A2e-30132
NC_014657:944000:950671950671951543873Caldicellulosiruptor owensensis OL chromosome, complete genomeribosome small subunit-dependent gtpase a6e-29128
NC_014150:648868:6699226699226710131092Brachyspira murdochii DSM 12563 chromosome, complete genomeribosome small subunit-dependent GTPase A3e-27122
NC_013729:3573000:3576362357636235774351074Kribbella flavida DSM 17836, complete genomeribosome small subunit-dependent GTPase A7e-23108
NC_011146:3206000:3213663321366332147301068Geobacter bemidjiensis Bem, complete genomeribosome small subunit-dependent GTPase A2e-1686.7
NC_009953:3852436:3855767385576738568551089Salinispora arenicola CNS-205 chromosome, complete genomeribosome small subunit-dependent GTPase A6e-28124
NC_014624:1369642:1373597137359713746821086Eubacterium limosum KIST612 chromosome, complete genomeribosome small subunit-dependent GTPase A2e-25116
NC_014924:2961970:2978166297816629792811116Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeribosome small subunit-dependent GTPase A2e-22106
NC_012918:1660477:1682321168232116833881068Geobacter sp. M21 chromosome, complete genomeribosome small subunit-dependent GTPase A1e-1687
NC_016584:4905310:491729449172944918187894Desulfosporosinus orientis DSM 765 chromosome, complete genomeribosome small subunit-dependent GTPase A3e-38159
NC_013416:875758:8903578903578913971041Aggregatibacter actinomycetemcomitans D11S-1, complete genomeribosome small subunit-dependent GTPase A2e-37156
NC_009012:686740:703585703585704469885Clostridium thermocellum ATCC 27405, complete genomeribosome small subunit-dependent GTPase A2e-29129
NC_011899:1437981:1447570144757014486731104Halothermothrix orenii H 168, complete genomeribosome small subunit-dependent GTPase A3e-24112
NC_013895:1282566:1300839130083913018911053Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completeribosome small subunit-dependent GTPase A6e-2098.6
NC_018012:1789028:1795832179583217969051074Thiocystis violascens DSM 198 chromosome, complete genomeribosome small subunit-dependent GTPase A3e-1789.7
NC_015571:168617:192366192366193313948Porphyromonas gingivalis TDC60, complete genomeribosome-associated GTPase5e-177620
NC_002570:2616899:262072226207222621606885Bacillus halodurans C-125, complete genomeribosome-associated GTPase7e-42171
NC_009654:2958316:2983072298307229841061035Marinomonas sp. MWYL1, complete genomeribosome-associated GTPase4e-38158
NC_005945:3636321:367694936769493677830882Bacillus anthracis str. Sterne, complete genomeribosome-associated GTPase4e-30132
NC_016513:1185241:1199838119983812008781041Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeribosome-associated GTPase3e-37155
NC_011658:3603009:366430436643043665185882Bacillus cereus AH187 chromosome, complete genomeribosome-associated GTPase3e-30132
NC_012581:559182:561424561424562305882Bacillus anthracis str. CDC 684 chromosome, complete genomeribosome-associated GTPase4e-30132
NC_009614:2431005:243625624362562437188933Bacteroides vulgatus ATCC 8482 chromosome, complete genomeribosome-associated GTPase1e-98359
NC_011725:3862094:388094838809483881829882Bacillus cereus B4264 chromosome, complete genomeribosome-associated GTPase4e-30132