Pre_GI: BLASTP Hits

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Query: NC_002950:1571383:1599190 Porphyromonas gingivalis W83, complete genome

Start: 1599190, End: 1600260, Length: 1071

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016610:2077603:2080176208017620812491074Tannerella forsythia ATCC 43037 chromosome, complete genomeputative o-succinylbenzoate synthase0711
NC_015571:801715:8202818202818213511071Porphyromonas gingivalis TDC60, complete genomemandelate racemase/muconate lactonizing enzyme family protein0707
NC_015164:3431279:3439172343917234402271056Bacteroides salanitronis DSM 18170 chromosome, complete genomeo-succinylbenzoic acid (OSB) synthetase2e-86319
NC_013037:2906730:2925411292541129265111101Dyadobacter fermentans DSM 18053, complete genomeMandelate racemase/muconate lactonizing protein3e-86318
NC_009615:1305678:1313557131355713146151059Parabacteroides distasonis ATCC 8503 chromosome, complete genomemuconate cycloisomerase2e-85316
NC_009614:3081190:3101570310157031026251056Bacteroides vulgatus ATCC 8482 chromosome, complete genomemuconate cycloisomerase2e-85316
NC_012673:77610:9578795787969171131Exiguobacterium sp. AT1b, complete genomeMandelate racemase/muconate lactonizing protein2e-1480.1
NC_007951:3631772:3651060365106036521721113Burkholderia xenovorans LB400 chromosome 1, complete sequenceChloromuconate cycloisomerase3e-1479.7
NC_010170:1580832:1582665158266515837771113Bordetella petrii, complete genomemuconate cycloisomerase I3e-1479.7
NC_013158:363222:3863923863923874201029Halorhabdus utahensis DSM 12940, complete genomeMandelate racemase/muconate lactonizing protein1e-1377.8
NC_017068:1327025:1330760133076013318511092Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative chloromuconate cycloisomerase5e-1375.5
NC_011740:1494796:1516005151600515172071203Escherichia fergusonii ATCC 35469, complete genomeMuconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE)8e-1271.6
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein1e-1171.2
NC_009033:791515:7970957970957982101116Staphylothermus marinus F1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-1171.2
NC_016023:1658377:1660267166026716613311065Bacillus coagulans 36D1 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-1170.5
NC_007298:1721425:173357117335711734527957Dechloromonas aromatica RCB, complete genomeMandelate racemase/muconate lactonizing enzyme3e-1169.7
NC_015424:525039:539647539647540576930Aeromonas veronii B565 chromosome, complete genomeO-succinylbenzoic acid (OSB) synthetase6e-1168.6
NC_014641:20103:2290822908240201113Achromobacter xylosoxidans A8 plasmid pA81, complete sequencechloromuconate cycloisomerase1e-1067.8
NC_010170:3944228:3958433395843339595451113Bordetella petrii, complete genomeChloromuconate cycloisomerase1e-1067.8
NC_007948:4646344:4647276464727646484571182Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme1e-1067.4
NC_007337:10464:2166921669227811113Ralstonia eutropha JMP134 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme2e-1067
NC_003454:63500:9750597505986321128Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeO-succinylbenzoate-CoA synthase2e-1067
NC_014376:693820:7121477121477132501104Clostridium saccharolyticum WM1 chromosome, complete genomeMandelate racemase/muconate lactonizing protein4e-1065.9
NC_008570:546736:561728561728562657930Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeo-succinylbenzoic acid (OSB) synthetase1e-0964.3
NC_002947:4167500:4237124423712442382451122Pseudomonas putida KT2440, complete genomemuconate cycloisomerase1e-0964.3
NC_009348:4011160:402581340258134026730918Aeromonas salmonicida subsp. salmonicida A449, complete genomeO-succinylbenzoate-CoA synthase3e-0963.2
NC_007337:10464:3120931209324111203Ralstonia eutropha JMP134 plasmid 1, complete sequenceMuconate cycloisomerase3e-0963.2
NC_007492:3384077:3399964339996434010851122Pseudomonas fluorescens PfO-1, complete genomeMandelate racemase/muconate lactonizing enzyme6e-0962
NC_020209:1949500:1971604197160419727311128Pseudomonas poae RE*1-1-14, complete genomemuconate cycloisomerase 16e-0962
NC_003317:1719546:1746116174611617473931278Brucella melitensis 16M chromosome I, complete sequenceMANDELATE RACEMASE1e-0861.2
NC_010552:592154:6173636173636184961134Burkholderia ambifaria MC40-6 chromosome 2, complete sequencemuconate and chloromuconate cycloisomerase2e-0860.8
NC_013741:1196997:1199986119998612010651080Archaeoglobus profundus DSM 5631, complete genomeMandelate racemase/muconate lactonizing protein5e-0858.9
NC_013174:562856:575260575260576216957Jonesia denitrificans DSM 20603, complete genomeMandelate racemase/muconate lactonizing protein1e-0757.8
NC_015954:1222776:1224258122425812253011044Halophilic archaeon DL31 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-0757.8
NC_015733:2720183:2742169274216927434821314Pseudomonas putida S16 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-0755.8
NC_014614:260782:2744012744012755041104Clostridium sticklandii, complete genomeputative muconate cycloisomerase5e-0755.5
NC_017082:6444522:6446279644627964473701092Bradyrhizobium sp. S23321, complete genomemandelate racemase6e-0755.5
NC_017986:5833819:5837087583708758382201134Pseudomonas putida ND6 chromosome, complete genomeCatB6e-0755.5
NC_010364:787766:814708814708815703996Halobacterium salinarum R1, complete genomeO-succinylbenzoate synthase1e-0654.7
NC_015136:2282488:2321268232126823224281161Burkholderia sp. CCGE1001 chromosome 1, complete sequencemandelate racemase/muconate lactonizing protein1e-0654.7
NC_012632:816000:8286828286828298841203Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-0654.3
NC_017093:3777178:3783389378338937844891101Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme-like protein1e-0654.3
NC_011002:564654:5676085676085687441137Burkholderia cenocepacia J2315 chromosome 3, complete sequencemuconate cycloisomerase I 22e-0653.5
NC_013198:394000:4344884344884356211134Lactobacillus rhamnosus GG, complete genomeenolase superfamily protein, N-acylamino acid racemase, mandelate racemase/muconate lactonizing enzyme / o-succinylbenzoate synthase2e-0653.5
NC_014839:12519:172471724718019773Pantoea sp. At-9b plasmid pPAT9B02, complete sequence2e-0653.5
NC_015873:238187:2559092559092570031095Megasphaera elsdenii DSM 20460, complete genomemandelate racemase/muconate lactonizing enzyme2e-0653.9
NC_010617:558954:5817775817775827901014Kocuria rhizophila DC2201, complete genomeputative o-succinylbenzoate synthase2e-0653.9
NC_002607:795777:822719822719823564846Halobacterium sp. NRC-1, complete genomeYkfB22e-0653.9
NC_014973:3690371:3723736372373637248451110Geobacter sp. M18 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-0653.9
NC_003888:3817000:3843523384352338446081086Streptomyces coelicolor A3(2), complete genomeracemase3e-0652.8
NC_019791:570923:5709235709235720561134Caldisphaera lagunensis DSM 15908 chromosome, complete genomeo-succinylbenzoic acid synthetase3e-0652.8
NC_013510:2782240:279655227965522797511960Thermomonospora curvata DSM 43183, complete genomeMandelate racemase/muconate lactonizing protein4e-0652.8
NC_007952:3196085:3229683322968332307621080Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative mandelate racemase (MdlA)4e-0652.8
NC_016779:4588000:4596265459626545973711107Bacillus cereus F837/76 chromosome, complete genomeO-succinylbenzoate-CoA synthase4e-0652.8
NC_011772:4763542:4776089477608947771951107Bacillus cereus G9842, complete genomeN-acylamino acid racemase6e-0652
NC_012880:3748665:3786817378681737879291113Dickeya dadantii Ech703, complete genomeMandelate racemase/muconate lactonizing protein7e-0652