Pre_GI: BLASTP Hits

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Query: NC_002950:155873:161876 Porphyromonas gingivalis W83, complete genome

Start: 161876, End: 163231, Length: 1356

Host Lineage: Porphyromonas gingivalis; Porphyromonas; Porphyromonadaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: This strain (also known as HG66) is virulent in a mouse model and has been extensively studied. It was originally isolated by H. Werner in the 1950s in Bonn, Germany, from an unknown human infection. Associated with severe and chronic periodontal disease. This organism is associated with severe and chronic periodontal (tissues surrounding and supporting the tooth) diseases. Progression of the disease is caused by colonization by this organism in an anaerobic environment in host tissues and severe progression results in loss of the tissues supporting the tooth and eventually loss of the tooth itself. The black pigmentation characteristic of this bacterium comes from iron acquisition that does not use the typical siderophore system of other bacteria but accumulates hemin.Peptides appear to be the predominant carbon and energy source of this organism, perhaps in keeping with its ability to destroy host tissue. Oxygen tolerance systems play a part in establishment of the organism in the oral cavity, including a superoxide dismutase. Pathogenic factors include extracellular adhesins that mediate interactions with other bacteria as well as the extracellular matrix, and a host of degradative enzymes that are responsible for tissue degradation and spread of the organism including the gingipains, which are trypsin-like cysteine proteases.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:440605:4466074466074479621356Porphyromonas gingivalis TDC60, complete genomemembrane-bound lytic murein transglycosylase D0826
NC_010729:265791:2717932717932731391347Porphyromonas gingivalis ATCC 33277, complete genomeputative membrane-bound lytic murein transglycosylase D0819
NC_004663:5194400:5211775521177552130701296Bacteroides thetaiotaomicron VPI-5482, complete genomemembrane-bound lytic murein transglycosylase D presursor8e-92337
NC_015160:63500:6605766057676311575Odoribacter splanchnicus DSM 20712 chromosome, complete genomeLytic transglycosylase catalytic3e-80299
NC_007514:1840971:1842366184236618440361671Chlorobium chlorochromatii CaD3, complete genomePeptidoglycan-binding LysM3e-78292
NC_007519:3527207:3539285353928535409191635Desulfovibrio alaskensis G20 chromosome, complete genomepeptidoglycan-binding LysM1e-37157
NC_015672:470000:4749864749864765991614Flexistipes sinusarabici DSM 4947 chromosome, complete genomelytic transglycosylase catalytic subunit4e-35149
NC_015856:1733500:1733670173367017351781509Collimonas fungivorans Ter331 chromosome, complete genomemembrane-bound lytic murein transglycosylase D1e-33144
NC_007759:1571425:1589039158903915910031965Syntrophus aciditrophicus SB, complete genomemembrane-bound lytic murein transglycosylase D precursor2e-32140
NC_016902:3863932:3877256387725638786141359Escherichia coli KO11FL chromosome, complete genomeMLTD_N domain-containing protein4e-32139
CP002516:3863932:3877256387725638786141359Escherichia coli KO11, complete genomeMLTD_N domain protein4e-32139
NC_007298:1418500:1436224143622414377621539Dechloromonas aromatica RCB, complete genomePeptidoglycan-binding LysM:Lytic transglycosylase, catalytic2e-30134
NC_011149:309556:3095563095563109231368Salmonella enterica subsp. enterica serovar Agona str. SL483,membrane-bound lytic murein transglycosylase D8e-29128
NC_008702:2259430:2259430225943022608781449Azoarcus sp. BH72, complete genomemembrane-bound lytic murein transglycosylase D1e-28127
NC_014972:3227500:3235921323592132371621242Desulfobulbus propionicus DSM 2032 chromosome, complete genomelytic transglycosylase catalytic3e-28126
NC_012438:1514376:153180115318011532712912Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomemembrane-bound lytic murein transglycosylase D7e-28125
NC_014722:771483:7925017925017942251725Burkholderia rhizoxinica HKI 454, complete genomemembrane-bound lytic murein transglycosylase D precursor1e-27124
NC_009727:1177390:1178437117843711797141278Coxiella burnetii Dugway 7E9-12, complete genometransglycosylase, Slt family2e-27124
NC_014910:1765065:1787239178723917887531515Alicycliphilus denitrificans BC chromosome, complete genomelytic transglycosylase catalytic4e-26119
NC_015277:6213304:621739762173976218191795Sphingobacterium sp. 21 chromosome, complete genomeLytic transglycosylase catalytic7e-26119
NC_014935:918855:9415209415209427191200Nitratifractor saLSUginis DSM 16511 chromosome, complete genomelytic transglycosylase catalytic4e-25116
NC_013730:2187898:219013721901372190967831Spirosoma linguale DSM 74, complete genomeLytic transglycosylase catalytic2e-24114
NC_015222:983647:9942879942879955791293Nitrosomonas sp. AL212 chromosome, complete genomeLytic transglycosylase catalytic2e-24114
NC_005085:1269787:1318086131808613199481863Chromobacterium violaceum ATCC 12472, complete genomepeptidoglycan N-acetylmuramoylhydrolase2e-24114
NC_007484:3358000:3379970337997033814811512Nitrosococcus oceani ATCC 19707, complete genomeLytic transglycosylase4e-24113
NC_010524:2117347:2140306214030621420421737Leptothrix cholodnii SP-6, complete genomeLytic transglycosylase catalytic3e-22106
NC_009901:2915939:2935508293550829370671560Shewanella pealeana ATCC 700345, complete genomeLytic transglycosylase catalytic7e-22105
NC_015846:1395358:139639513963951397312918Capnocytophaga canimorsus Cc5 chromosome, complete genomeRegulatory protein dniR2e-20100
NC_009850:972692:9799679799679812261260Arcobacter butzleri RM4018, complete genomeputative lytic murein transglycosylase1e-1998.2
NC_009714:224325:265098265098266063966Campylobacter hominis ATCC BAA-381, complete genomeregulatory protein dnir1e-1894.4
NC_009714:265098:265098265098266063966Campylobacter hominis ATCC BAA-381, complete genomeregulatory protein dnir1e-1894.4
NC_017187:937649:9449249449249461831260Arcobacter butzleri ED-1, complete genomeputative lytic murein transglycosylase5e-1892.8
NC_009348:381752:3943843943843953881005Aeromonas salmonicida subsp. salmonicida A449, complete genomemembrane bound lytic murein transglycosylase D1e-1791.3
NC_014355:1865003:1935065193506519365461482Candidatus Nitrospira defluvii, complete genomehypothetical protein5e-1479.3
NC_010830:718614:7274757274757288991425Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein2e-1377.4
NC_007508:1221500:1222161122216112233391179Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomemembrane-bound murein hydrolase D2e-1274.3
NC_007644:1638083:164380416438041644424621Moorella thermoacetica ATCC 39073, complete genomeLytic transglycosylase, catalytic4e-1169.7
NC_014212:501449:510294510294510758465Meiothermus silvanus DSM 9946 chromosome, complete genomeLytic transglycosylase catalytic7e-1065.5
NC_009664:533021:5479845479845490901107Kineococcus radiotolerans SRS30216, complete genomeLytic transglycosylase catalytic1e-0964.7
NC_013194:963735:997671997671998336666Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeLytic transglycosylase catalytic2e-0963.9
NC_010102:1829357:1849885184988518519662082Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0963.9
NC_020211:2123819:2123819212381921258252007Serratia marcescens WW4, complete genomelytic transglycosylase catalytic subunit3e-0963.5
NC_011283:4170369:4194180419418041961051926Klebsiella pneumoniae 342 chromosome, complete genometransglycosylase SLT domain-containing protein4e-0963.2
NC_016845:1285435:1323839132383913257641926Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,transglycosylase5e-0962.8
NC_016845:2306744:2309391230939123113942004Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lytic transglycosylase, catalytic6e-0962.4
NC_020126:8984500:898707289870728987959888Myxococcus stipitatus DSM 14675, complete genometransglycosylase SLT domain-containing protein1e-0862
NC_014219:1736000:175182117518211752510690Bacillus selenitireducens MLS10 chromosome, complete genomeLytic transglycosylase catalytic8e-0962
NC_017030:8766757:877403587740358774856822Corallococcus coralloides DSM 2259 chromosome, complete genometransglycosylase1e-0861.6
NC_014121:3627588:3644135364413536459041770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0860.8
NC_009483:5113729:512062851206285121383756Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase5e-0859.3
NC_017179:281069:299909299909300577669Clostridium difficile BI1, complete genometransglycosylase8e-0858.9
NC_007511:1147696:1170317117031711714201104Burkholderia sp. 383 chromosome 2, complete sequenceLytic transglycosylase, catalytic2e-0757.8
NC_013093:2599591:259959125995912600574984Actinosynnema mirum DSM 43827, complete genomeLytic transglycosylase catalytic2e-0757.8
NC_013501:176073:196264196264196827564Rhodothermus marinus DSM 4252, complete genomePeptidoglycan-binding LysM2e-0757.4
NC_014376:3671441:368650836865083687230723Clostridium saccharolyticum WM1 chromosome, complete genomeLytic transglycosylase catalytic4e-0756.2
NC_016627:793583:793583793583794260678Clostridium clariflavum DSM 19732 chromosome, complete genomelytic murein transglycosylase4e-0756.2
NC_009483:2854500:287564628756462876242597Geobacter uraniireducens Rf4 chromosome, complete genomelytic transglycosylase7e-0755.8
NC_010814:2217153:224462722446272245265639Geobacter lovleyi SZ, complete genomeLytic transglycosylase catalytic8e-0755.5
NC_014733:1073540:107696010769601077583624Methylovorus sp. MP688 chromosome, complete genomelytic transglycosylase catalytic1e-0655.1
NC_012779:610509:6105096105096124371929Edwardsiella ictaluri 93-146, complete genomesoluble lytic murein transglycosylase3e-0653.5
NC_013173:1231213:123625212362521236854603Desulfomicrobium baculatum DSM 4028, complete genomeLytic transglycosylase catalytic5e-0652.8