Pre_GI: BLASTN Hits

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Query: NC_002947:5386489 Pseudomonas putida KT2440, complete genome

Start: 5386489, End: 5414167, Length: 27679

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:51664595166459519343626978Pseudomonas putida F1, complete genome04324BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:59167115916711594513828428Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:5336773*5336773541660879836Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:49400004940000496327423275Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:47813264781326481642335098Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:4499143*4499143452348624344Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:35970833597083362009923017Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:26715082671508269955228045Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:21246821246824209929632Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:20738207386960648869Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:1190000*1190000121945029451Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:40613724061372409399732626Pseudomonas syringae pv. tomato str. DC3000, complete genome0694BLASTN svgBLASTP svg
NC_004578:61386696138669616309624428Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome0702BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome04046BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome04006BLASTN svgBLASTP svg
NC_015733:11799771179977119809918123Pseudomonas putida S16 chromosome, complete genome04006BLASTN svgBLASTP svg
NC_002947:46045824604582462867624095Pseudomonas putida KT2440, complete genome03959BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome03451BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome03380BLASTN svgBLASTP svg
NC_004129:4093610*4093610411954425935Pseudomonas fluorescens Pf-5, complete genome01927BLASTN svgBLASTP svg
NC_004129:92647992647994509918621Pseudomonas fluorescens Pf-5, complete genome01326BLASTN svgBLASTP svg
NC_009434:3611738*36117383748875137138Pseudomonas stutzeri A1501, complete genome01152BLASTN svgBLASTP svg
NC_021150:43504614350461437377523315Azotobacter vinelandii CA6, complete genome01148BLASTN svgBLASTP svg
NC_012560:43504654350465437377923315Azotobacter vinelandii DJ, complete genome01148BLASTN svgBLASTP svg
NC_007492:85742885742888733529908Pseudomonas fluorescens PfO-1, complete genome0959BLASTN svgBLASTP svg
NC_020209:38748443874844390437229529Pseudomonas poae RE*1-1-14, complete genome8e-155555BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-147529BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome2e-143517BLASTN svgBLASTP svg
NC_007005:49927304992730502132828599Pseudomonas syringae pv. syringae B728a, complete genome2e-121444BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-113418BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome1e-101379BLASTN svgBLASTP svg
NC_005773:47972424797242481709919858Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-94355BLASTN svgBLASTP svg
NC_018691:28636592863659289037626718Alcanivorax dieselolei B5 chromosome, complete genome4e-89337BLASTN svgBLASTP svg
NC_020209:1847895*1847895187267824784Pseudomonas poae RE*1-1-14, complete genome1e-88335BLASTN svgBLASTP svg
NC_014394:3114648*3114648313404119394Gallionella capsiferriformans ES-2 chromosome, complete genome2e-75291BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome4e-49204BLASTN svgBLASTP svg
NC_014216:30033473003347302346820122Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome5e-48200BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-46194BLASTN svgBLASTP svg
NC_010501:34483893448389347837429986Pseudomonas putida W619, complete genome1e-42182BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome3e-40174BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome5e-39170BLASTN svgBLASTP svg
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome3e-37165BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome7e-32147BLASTN svgBLASTP svg
NC_009439:1174432*1174432119973625305Pseudomonas mendocina ymp, complete genome1e-30143BLASTN svgBLASTP svg
NC_009439:12978511297851133481436964Pseudomonas mendocina ymp, complete genome1e-30143BLASTN svgBLASTP svg
NC_009439:20545205454442723883Pseudomonas mendocina ymp, complete genome1e-30143BLASTN svgBLASTP svg
NC_009439:3394174*3394174341925525082Pseudomonas mendocina ymp, complete genome1e-30143BLASTN svgBLASTP svg
NC_009439:44289044289048900846119Pseudomonas mendocina ymp, complete genome1e-30143BLASTN svgBLASTP svg
NC_010170:4196197*4196197422572429528Bordetella petrii, complete genome4e-30141BLASTN svgBLASTP svg
NC_015633:28013212801321282546624146Vibrio anguillarum 775 chromosome chromosome I, complete sequence7e-29137BLASTN svgBLASTP svg
NC_004603:37032037032039589225573Vibrio parahaemolyticus RIMD 2210633 chromosome I, complete7e-29137BLASTN svgBLASTP svg
NC_005773:48992524899252493544536194Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-27133BLASTN svgBLASTP svg
NC_002516:89100089100091357122572Pseudomonas aeruginosa PAO1, complete genome4e-27131BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome2e-26129BLASTN svgBLASTP svg
NC_008782:2781229*2781229280258121353Acidovorax sp. JS42, complete genome2e-26129BLASTN svgBLASTP svg
NC_003062:2506959*2506959252983722879Agrobacterium tumefaciens str. C58 chromosome circular, complete7e-26127BLASTN svgBLASTP svg
NC_003304:2507000*2507000253013123132Agrobacterium tumefaciens str. C58 chromosome circular, complete7e-26127BLASTN svgBLASTP svg
NC_008463:47432964743296476909925804Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-24123BLASTN svgBLASTP svg
NC_011770:49241274924127497209947973Pseudomonas aeruginosa LESB58, complete genome1e-24123BLASTN svgBLASTP svg
NC_015677:12828651282865131149128627Ramlibacter tataouinensis TTB310 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome2e-23119BLASTN svgBLASTP svg
NC_009943:94083594083596563124797Candidatus Desulfococcus oleovorans Hxd3, complete genome1e-21113BLASTN svgBLASTP svg
NC_019902:1681320*1681320170390722588Thioalkalivibrio nitratireducens DSM 14787, complete genome4e-21111BLASTN svgBLASTP svg
NC_010995:764567*76456778991125345Cellvibrio japonicus Ueda107, complete genome6e-20107BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome6e-20107BLASTN svgBLASTP svg
NC_015410:1324313*1324313135087526563Pseudomonas mendocina NK-01 chromosome, complete genome1e-18103BLASTN svgBLASTP svg
NC_020209:997385*997385104138844004Pseudomonas poae RE*1-1-14, complete genome1e-18103BLASTN svgBLASTP svg
NC_014034:14186811418681144488426204Rhodobacter capsulatus SB1003 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_010501:26095672609567264709937533Pseudomonas putida W619, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_009512:56325915632591568653153941Pseudomonas putida F1, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007963:31137393113739313569421956Chromohalobacter salexigens DSM 3043, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_014306:43760124376012441784741836Erwinia billingiae Eb661, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_010814:1441327*1441327149159950273Geobacter lovleyi SZ, complete genome9e-1693.7BLASTN svgBLASTP svg
NC_013440:62586762586765122625360Haliangium ochraceum DSM 14365, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_013947:613774*61377463382720054Stackebrandtia nassauensis DSM 44728 chromosome, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_007912:3466966*3466966348462717662Saccharophagus degradans 2-40, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_002947:48050604805060483118826129Pseudomonas putida KT2440, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_004547:91355391355395334239790Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013854:3200912*3200912322443023519Azospirillum sp. B510, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020911:18592101859210188209922890Octadecabacter antarcticus 307, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-1073.8BLASTN svgBLASTP svg
NC_013730:3729626*3729626375717427549Spirosoma linguale DSM 74, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_011144:10739441073944109429420351Phenylobacterium zucineum HLK1, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_003143:12331281233128125981426687Yersinia pestis CO92, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004088:3382148*3382148340611023963Yersinia pestis KIM, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008149:3251196*3251196327595124756Yersinia pestis Nepal516, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008150:65089965089967359922701Yersinia pestis Antiqua, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010159:14179931417993144109923107Yersinia pestis Angola, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010634:13423931342393136733024938Yersinia pseudotuberculosis PB1/+, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_020064:3609844*3609844365321743374Serratia marcescens FGI94, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002947:34923793492379351709924721Pseudomonas putida KT2440, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_004129:26091892609189263251823330Pseudomonas fluorescens Pf-5, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007802:1484641*1484641150591621276Jannaschia sp. CCS1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009512:43754524375452440539429943Pseudomonas putida F1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014500:4257145*4257145428370126557Dickeya dadantii 3937 chromosome, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_005773:26417152641715266373322019Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008278:25943872594387261362919243Frankia alni ACN14a, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012917:83372183372187179538075Pectobacterium carotovorum subsp. carotovorum PC1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013508:2870954*2870954288859917646Edwardsiella tarda EIB202, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009512:4287605*4287605432250934905Pseudomonas putida F1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011884:10293281029328105377624449Cyanothece sp. PCC 7425, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_014844:21583182158318217659218275Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015061:37259213725921375022024300Rahnella sp. Y9602 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015733:25813242581324263433453011Pseudomonas putida S16 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015733:35958823595882362033824457Pseudomonas putida S16 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_012779:29570002957000298403927040Edwardsiella ictaluri 93-146, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009512:10253651025365104401118647Pseudomonas putida F1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004459:349500*34950040074451245Vibrio vulnificus CMCP6 chromosome I, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_002927:37168943716894377039253499Bordetella bronchiseptica RB50, complete genome3e-0661.9BLASTN svgBLASTP svg