Pre_GI: BLASTN Hits

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Query: NC_002947:2809591 Pseudomonas putida KT2440, complete genome

Start: 2809591, End: 2832649, Length: 23059

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome014150BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome04161BLASTN svgBLASTP svg
NC_012660:4558122*4558122459234134220Pseudomonas fluorescens SBW25 chromosome, complete genome03897BLASTN svgBLASTP svg
NC_004129:2328491*2328491236123032740Pseudomonas fluorescens Pf-5, complete genome03435BLASTN svgBLASTP svg
NC_015410:3209954*3209954323120121248Pseudomonas mendocina NK-01 chromosome, complete genome02351BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete02313BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete02313BLASTN svgBLASTP svg
NC_008463:2467219*2467219250339236174Pseudomonas aeruginosa UCBPP-PA14, complete genome02189BLASTN svgBLASTP svg
NC_002516:3079850*3079850310675226903Pseudomonas aeruginosa PAO1, complete genome02149BLASTN svgBLASTP svg
NC_009434:2577717*2577717259643418718Pseudomonas stutzeri A1501, complete genome01861BLASTN svgBLASTP svg
NC_007492:2203220*2203220222417320954Pseudomonas fluorescens PfO-1, complete genome01717BLASTN svgBLASTP svg
NC_021150:2026496*2026496204664620151Azotobacter vinelandii CA6, complete genome01063BLASTN svgBLASTP svg
NC_012560:2026483*2026483204663320151Azotobacter vinelandii DJ, complete genome01063BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome01033BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete0735BLASTN svgBLASTP svg
NC_014931:4234288*4234288426496730680Variovorax paradoxus EPS chromosome, complete genome1e-122448BLASTN svgBLASTP svg
NC_003902:2903493*2903493292609922607Xanthomonas campestris pv. campestris str. ATCC 33913, complete1e-116428BLASTN svgBLASTP svg
NC_006834:3422985*3422985344422221238Xanthomonas oryzae pv. oryzae KACC10331, complete genome2e-93351BLASTN svgBLASTP svg
NC_007705:3429493*3429493345339023898Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome2e-93351BLASTN svgBLASTP svg
NC_018868:569423*56942361904449622Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genome2e-38168BLASTN svgBLASTP svg
NC_008702:1153344*1153344117844425101Azoarcus sp. BH72, complete genome6e-38167BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome2e-34155BLASTN svgBLASTP svg
NC_016002:1326500*1326500135490028401Pseudogulbenkiania sp. NH8B, complete genome2e-31145BLASTN svgBLASTP svg
NC_007645:4677965*4677965469591417950Hahella chejuensis KCTC 2396, complete genome2e-31145BLASTN svgBLASTP svg
NC_009512:33345793334579336267428096Pseudomonas putida F1, complete genome6e-29137BLASTN svgBLASTP svg
NC_020063:2011019*2011019203659925581Enterobacteriaceae bacterium strain FGI 57, complete genome1e-26129BLASTN svgBLASTP svg
NC_013850:2103469*2103469214696843500Klebsiella variicola At-22 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_007298:2856104*2856104289461138508Dechloromonas aromatica RCB, complete genome3e-21111BLASTN svgBLASTP svg
NC_014910:2585747*2585747260852622780Alicycliphilus denitrificans BC chromosome, complete genome1e-20109BLASTN svgBLASTP svg
NC_009049:2131017*2131017216459933583Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence1e-20109BLASTN svgBLASTP svg
NC_008781:2981868*2981868300465822791Polaromonas naphthalenivorans CJ2, complete genome8e-19103BLASTN svgBLASTP svg
NC_013959:1723037*1723037174709924063Sideroxydans lithotrophicus ES-1 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_015500:987641*987641101630028660Treponema brennaborense DSM 12168 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_003198:1693623*1693623171542721805Salmonella enterica subsp. enterica serovar Typhi str. CT18,5e-1797.6BLASTN svgBLASTP svg
NC_004631:1271500*1271500129345821959Salmonella enterica subsp. enterica serovar Typhi Ty2, complete5e-1797.6BLASTN svgBLASTP svg
NC_006511:1579776*1579776160172721952Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC5e-1797.6BLASTN svgBLASTP svg
NC_009512:22384372238437226259924163Pseudomonas putida F1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010102:17031721703172172512221951Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,5e-1797.6BLASTN svgBLASTP svg
NC_010658:1772994*1772994179509922106Shigella boydii CDC 3083-94, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_003112:744476*74447676938624911Neisseria meningitidis MC58, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011083:1408202*1408202142698618785Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-1591.7BLASTN svgBLASTP svg
NC_003197:1401603*1401603142524123639Salmonella typhimurium LT2, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_011992:1505106*1505106152858323478Acidovorax ebreus TPSY, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_002696:1154996*1154996117718622191Caulobacter crescentus CB15, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009439:49137674913767493609922333Pseudomonas mendocina ymp, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014500:2589089*2589089260812419036Dickeya dadantii 3937 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_016026:997225*997225103720039976Micavibrio aeruginosavorus ARL-13 chromosome, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007086:1988000*1988000201548327484Xanthomonas campestris pv. campestris str. 8004, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012779:1820244*1820244184249822255Edwardsiella ictaluri 93-146, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007484:1229899*1229899125251522617Nitrosococcus oceani ATCC 19707, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007947:2140000*2140000218514745148Methylobacillus flagellatus KT, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012912:2216749*2216749224082124073Dickeya zeae Ech1591, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012880:2425330*2425330245003424705Dickeya dadantii Ech703, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013166:1841446*1841446185969318248Kangiella koreensis DSM 16069, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015222:2089767*2089767212261832852Nitrosomonas sp. AL212 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015731:867377*86737792057653200Nitrosomonas sp. Is79A3 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014623:4999032*4999032501775318722Stigmatella aurantiaca DW4/3-1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004757:1021355*1021355105233830984Nitrosomonas europaea ATCC 19718, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010120:609323*60932363703227710Neisseria meningitidis 053442, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008767:613394*61339463989326500Neisseria meningitidis FAM18, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_003112:673772*67377269516421393Neisseria meningitidis MC58, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_002506:298868*29886831909920232Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete7e-1073.8BLASTN svgBLASTP svg
NC_015566:32694693269469329221522747Serratia sp. AS12 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012490:3094857*3094857312125526399Rhodococcus erythropolis PR4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009663:2500186*2500186252039120206Sulfurovum sp. NBC37-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008344:2434344*2434344245352619183Nitrosomonas eutropha C91, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007645:46515324651532467620424673Hahella chejuensis KCTC 2396, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014960:1735786*1735786180405368268Anaerolinea thermophila UNI-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015853:112599925999Acidithiobacillus caldus SM-1 plasmid pLAtc2, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_014972:1621850*1621850164648324634Desulfobulbus propionicus DSM 2032 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002939:1634843*1634843166966434822Geobacter sulfurreducens PCA, complete genome3e-0661.9BLASTN svgBLASTP svg