Pre_GI: BLASTP Hits

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Query: NC_002947:6152500:6163260 Pseudomonas putida KT2440, complete genome

Start: 6163260, End: 6165272, Length: 2013

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013959:1059004:1076657107665710786902034Sideroxydans lithotrophicus ES-1 chromosome, complete genomeputative Tn7-like transposition protein B3e-121436
NC_012968:1594954:1611436161143616134692034Methylotenera mobilis JLW8, complete genomeputative Tn7-like transposition protein B6e-112405
NC_007908:1108494:1118003111800311200452043Rhodoferax ferrireducens T118, complete genomehypothetical protein1e-74281
NC_013921:1915377:1924090192409019262522163Thermoanaerobacter italicus Ab9 chromosome, complete genomeIntegrase catalytic region3e-1584
NC_014657:2127500:2136058213605821382202163Caldicellulosiruptor owensensis OL chromosome, complete genomeintegrase catalytic region7e-1582.8
NC_015958:2174731:2184442218444221866042163Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase catalytic subunit2e-1378.6
NC_011206:200000:2065542065542087402187Acidithiobacillus ferrooxidans ATCC 53993, complete genomeTn7-like transposition protein B3e-1170.5
NC_010634:4463727:4485390448539044875552166Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein6e-1170.1
NC_014394:1325616:1328977132897713311422166Gallionella capsiferriformans ES-2 chromosome, complete genomeIntegrase catalytic region2e-0964.7
NC_010718:237962:2568042568042589572154Natranaerobius thermophilus JW/NM-WN-LF, complete genomeIntegrase catalytic region4e-0963.9
NC_009349:3396:1164611646138292184Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTn7-like transposition protein B6e-0963.5
NC_009838:81913:1099931099931121162124Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTnsB2e-0861.2
CU928145:3983432:3998093399809340002162124Escherichia coli 55989 chromosome, complete genomeTn7-like transposition protein TnsB2e-0861.2
NC_011748:3983432:3998093399809340002162124Escherichia coli 55989, complete genomeTn7-like transposition protein TnsB2e-0861.2
NC_014121:5000069:5014584501458450166622079Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeTn7-like transposition protein TnsB2e-0861.2
NC_014844:2721746:2729872272987227319592088Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeintegrase catalytic subunit7e-0859.7
NC_015851:89006:1057801057801078552076Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetransposon Tn7 transposition protein tnsB2e-0757.8
NC_006512:2789098:2812068281206828141462079Idiomarina loihiensis L2TR, complete genomeTransposon Tn7 transposition protein tnsB5e-0757
NC_017328:3935185:3955764395576439578722109Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn7 transposition protein tnsB5e-0757
NC_007384:4095016:4101517410151741036252109Shigella sonnei Ss046, complete genomeputative transposase5e-0757
NC_015740:4508375:4518273451827345203332061Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegrase core domain-containing protein1e-0655.8