Pre_GI: BLASTP Hits

Some Help

Query: NC_002947:5961096:5962315 Pseudomonas putida KT2440, complete genome

Start: 5962315, End: 5963178, Length: 864

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:6589575:659082765908276591657831Pseudomonas fluorescens F113 chromosome, complete genomeprotein DapF5e-125447
NC_020209:4549563:455081445508144551644831Pseudomonas poae RE*1-1-14, complete genomediaminopimelate epimerase6e-125446
NC_011901:39215:443764437645212837Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDiaminopimelate epimerase8e-82303
NC_013959:156991:159865159865160695831Sideroxydans lithotrophicus ES-1 chromosome, complete genomediaminopimelate epimerase2e-79295
NC_014541:4167916:416791641679164168725810Ferrimonas balearica DSM 9799 chromosome, complete genomediaminopimelate epimerase6e-78290
NC_007712:4023516:402421440242144025038825Sodalis glossinidius str. 'morsitans', complete genomediaminopimelate epimerase2e-75282
NC_005061:647567:649651649651650481831Candidatus Blochmannia floridanus, complete genomediaminopimelate epimerase1e-61236
NC_014909:662500:663820663820664653834Candidatus Blochmannia vafer str. BVAF chromosome, complete genomediaminopimelate epimerase7e-61234
NC_009012:3653111:365655036565503657392843Clostridium thermocellum ATCC 27405, complete genomeDiaminopimelate epimerase2e-58225
NC_009437:1481064:148245114824511483287837Caldicellulosiruptor saccharolyticus DSM 8903, complete genomediaminopimelate epimerase5e-48191
NC_014933:2525393:253782225378222538667846Bacteroides helcogenes P 36-108 chromosome, complete genomediaminopimelate epimerase3e-47188
NC_009614:4918877:493370049337004934542843Bacteroides vulgatus ATCC 8482 chromosome, complete genomediaminopimelate epimerase2e-46186
NC_011565:1054414:105718210571821058009828Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,diaminopimelate epimerase2e-45182
NC_014209:1363151:136315113631511363975825Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,diaminopimelate epimerase7e-45181
NC_016077:8545:214002140022329930Acidaminococcus intestini RyC-MR95 chromosome, complete genomediaminopimelate epimerase5e-45181
NC_014538:1125000:114613411461341146958825Thermoanaerobacter sp. X513 chromosome, complete genomediaminopimelate epimerase4e-45181
NC_003228:3085793:310488631048863105704819Bacteroides fragilis NCTC 9343, complete genomediaminopimelate epimerase3e-44178
NC_007516:1283210:1285667128566712867731107Synechococcus sp. CC9605, complete genomediaminopimelate epimerase8e-44177
NC_020209:397376:438844438844439668825Pseudomonas poae RE*1-1-14, complete genomediaminopimelate epimerase9e-44177
NC_016641:5306000:530607653060765306909834Paenibacillus terrae HPL-003 chromosome, complete genomediaminopimelate epimerase3e-43175
NC_011658:4672000:469333146933314694197867Bacillus cereus AH187 chromosome, complete genomediaminopimelate epimerase2e-42172
NC_014479:3079855:309464530946453095499855Bacillus subtilis subsp. spizizenii str. W23 chromosome, completediaminopimelate epimerase8e-42171
NC_015164:3144745:315291831529183153718801Bacteroides salanitronis DSM 18170 chromosome, complete genomeDiaminopimelate epimerase4e-41168
NC_015555:1450704:145070414507041451537834Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeDiaminopimelate epimerase6e-41167
NC_007759:2179000:219447421944742195361888Syntrophus aciditrophicus SB, complete genomediaminopimelate epimerase3e-40165
NC_019970:1457794:146377214637721464605834Thermoanaerobacterium thermosaccharolyticum M0795, complete genomediaminopimelate epimerase8e-40164
NC_014410:1527405:152832115283211529154834Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,diaminopimelate epimerase1e-38160
NC_016830:4809210:481433848143384815141804Pseudomonas fluorescens F113 chromosome, complete genomediaminopimelate epimerase2e-37156
NC_010730:180000:186950186950187810861Sulfurihydrogenibium sp. YO3AOP1, complete genomeDiaminopimelate epimerase2e-37155
NC_014122:205112:215168215168216016849Methanocaldococcus infernus ME chromosome, complete genomediaminopimelate epimerase2e-37155
NC_021182:401129:418550418550419419870Clostridium pasteurianum BC1, complete genomediaminopimelate epimerase5e-37154
NC_020134:845164:8620598620598661054047Clostridium stercorarium subsp. stercorarium DSM 8532, completecarbamoyl-phosphate synthase large chain5e-36151
NC_013887:17160:378373783738724888Methanocaldococcus sp. FS406-22 chromosome, complete genomediaminopimelate epimerase8e-36150
NC_008061:2548849:255348825534882554297810Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceDiaminopimelate epimerase7e-36150
NC_008543:2696377:271269127126912713500810Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceDiaminopimelate epimerase7e-36150
NC_015380:412277:414824414824415615792Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomediaminopimelate epimerase2e-35149
NC_012225:1071159:107274910727491073588840Brachyspira hyodysenteriae WA1, complete genomeDiaminopimelate epimerase3e-35149
NC_016584:2244966:226601522660152266866852Desulfosporosinus orientis DSM 765 chromosome, complete genomediaminopimelate epimerase6e-35147
NC_010515:1618093:162272416227241623533810Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceDiaminopimelate epimerase8e-35147
NC_005295:21995:422524225243049798Ehrlichia ruminantium str. Welgevonden, complete genomediaminopimelate epimerase8e-35147
NC_003366:2106937:211653321165332117351819Clostridium perfringens str. 13, complete genomediaminopimelate epimerase9e-34144
NC_014222:1045281:106738010673801068336957Methanococcus voltae A3 chromosome, complete genomediaminopimelate epimerase1e-30133
NC_013894:1194458:120558612055861206422837Thermocrinis albus DSM 14484 chromosome, complete genomediaminopimelate epimerase7e-30131
NC_017986:5421000:542804054280405428846807Pseudomonas putida ND6 chromosome, complete genomediaminopimelate epimerase1e-29130
NC_009512:3118907:312729831272983128104807Pseudomonas putida F1, complete genomeDiaminopimelate epimerase1e-29130
NC_013665:849508:850918850918851757840Methanocella paludicola SANAE, complete genomediaminopimelate epimerase2e-28125
NC_013939:212331:217130217130217945816Deferribacter desulfuricans SSM1, complete genomediaminopimelate epimerase3e-26119
NC_013943:2610902:262226026222602623072813Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomediaminopimelate epimerase1e-25117
NC_016929:657451:672055672055672864810Rickettsia canadensis str. CA410 chromosome, complete genomediaminopimelate epimerase2e-25116
NC_009879:670169:682625682625683434810Rickettsia canadensis str. McKiel, complete genomediaminopimelate epimerase2e-25116
NC_020419:923949:941297941297942121825Uncultured Termite group 1 bacterium phylotype Rs-D17 DNA, completediaminopimelate epimerase1e-24114
NS_000191:923949:941297941297942121825Uncultured Termite group 1 bacterium phylotype Rs-D17, completediaminopimelate epimerase1e-24114
NC_014253:431942:477202477202478032831Methanohalobium evestigatum Z-7303 chromosome, complete genomediaminopimelate epimerase2e-24113
NC_017058:862000:875845875845876657813Rickettsia australis str. Cutlack chromosome, complete genomediaminopimelate epimerase3e-24112
NC_009881:562000:566521566521567333813Rickettsia akari str. Hartford, complete genomediaminopimelate epimerase7e-24111
NC_002937:1915787:193252019325201933368849Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completediaminopimelate epimerase5e-24111
NC_003103:563961:564933564933565745813Rickettsia conorii str. Malish 7, complete genomediaminopimelate epimerase2e-23109
NC_017044:564000:569723569723570535813Rickettsia parkeri str. Portsmouth chromosome, complete genomediaminopimelate epimerase2e-23109
NC_010263:563814:569261569261570073813Rickettsia rickettsii str. Iowa, complete genomediaminopimelate epimerase5e-23108
NC_009882:563830:569277569277570089813Rickettsia rickettsii str. 'Sheila Smith', complete genomediaminopimelate epimerase5e-23108
NC_016908:563747:569194569194570006813Rickettsia rickettsii str. Colombia chromosome, complete genomediaminopimelate epimerase5e-23108
NC_016909:563727:569174569174569986813Rickettsia rickettsii str. Arizona chromosome, complete genomediaminopimelate epimerase5e-23108
NC_016911:563822:569269569269570081813Rickettsia rickettsii str. Hauke chromosome, complete genomediaminopimelate epimerase5e-23108
NC_016914:563941:569388569388570200813Rickettsia rickettsii str. Hino chromosome, complete genomediaminopimelate epimerase5e-23108
NC_017062:508500:511489511489512301813Rickettsia typhi str. B9991CWPP chromosome, complete genomediaminopimelate epimerase3e-22105
NC_015318:249445:269659269659270492834Hippea maritima DSM 10411 chromosome, complete genomeDiaminopimelate epimerase5e-22105
NC_000963:506500:510023510023510835813Rickettsia prowazekii str. Madrid E, complete genomediaminopimelate epimerase8e-22104
NC_017049:505000:508140508140508952813Rickettsia prowazekii str. Chernikova chromosome, complete genomediaminopimelate epimerase8e-22104
NC_017050:506500:510026510026510838813Rickettsia prowazekii str. Katsinyian chromosome, complete genomediaminopimelate epimerase8e-22104
NC_017051:505000:508150508150508962813Rickettsia prowazekii str. Dachau chromosome, complete genomediaminopimelate epimerase8e-22104
NC_017056:506500:510005510005510817813Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomediaminopimelate epimerase8e-22104
NC_017057:507500:510227510227511039813Rickettsia prowazekii str. RpGvF24 chromosome, complete genomediaminopimelate epimerase2e-21102
NC_017048:849000:852162852162852974813Rickettsia prowazekii str. GvV257 chromosome, complete genomediaminopimelate epimerase2e-21102
NC_014836:33278:501835018351052870Desulfurispirillum indicum S5 chromosome, complete genomediaminopimelate epimerase7e-21101
NC_016884:641000:650811650811651611801Sulfobacillus acidophilus DSM 10332 chromosome, complete genomediaminopimelate epimerase6e-2098.2
NC_007760:645016:663416663416664216801Anaeromyxobacter dehalogenans 2CP-C, complete genomediaminopimelate epimerase1e-1893.6
NC_014759:2099623:211283021128302113609780Marivirga tractuosa DSM 4126 chromosome, complete genomediaminopimelate epimerase4e-1892.4
NC_015144:734726:734726734726735508783Weeksella virosa DSM 16922 chromosome, complete genomediaminopimelate epimerase6e-1891.3
NC_020125:1237536:125885012588501259611762Riemerella anatipestifer RA-CH-2, complete genomehypothetical protein3e-1685.9
NC_017301:1360565:135967513596751360568894Corynebacterium pseudotuberculosis C231 chromosome, completediaminopimelate epimerase6e-1685.1
NC_017300:1358260:135737013573701358263894Corynebacterium pseudotuberculosis 1002 chromosome, completediaminopimelate epimerase6e-1685.1
NC_010118:207843:226860226860227645786Candidatus Sulcia muelleri GWSS, complete genomediaminopimelate epimerase6e-1478.2
NC_014935:31020:323323233233099768Nitratifractor saLSUginis DSM 16511 chromosome, complete genomediaminopimelate epimerase1e-1273.9
NC_003551:390268:405568405568406407840Methanopyrus kandleri AV19, complete genomeDiaminopimelate epimerase3e-1169.3
NC_015978:32875:532505325054224975Lactobacillus sanfranciscensis TMW 1.1304 chromosome, completeDiaminopimelate epimerase6e-1168.2
NC_004552:235769:242986242986243768783Chlamydophila abortus S26/3, complete genomediaminopimelate epimerase2e-1066.6
NC_009714:74500:899828998290800819Campylobacter hominis ATCC BAA-381, complete genomediaminopimelate epimerase2e-1066.2
NC_016788:1445705:144481514448151445708894Corynebacterium diphtheriae HC04 chromosome, complete genomediaminopimelate epimerase2e-1066.2
NC_016787:1441350:144135014413501442243894Corynebacterium diphtheriae HC03 chromosome, complete genomediaminopimelate epimerase2e-1066.2
NC_017192:159047:175796175796176536741Arcobacter sp. L, complete genomediaminopimelate epimerase2e-1066.2
NC_008526:74500:9444894448954551008Lactobacillus casei ATCC 334, complete genomeDiaminopimelate epimerase9e-1064.3
NC_002179:237854:239911239911240684774Chlamydophila pneumoniae AR39, complete genomediaminopimelate epimerase1e-0963.9
NC_002491:585807:600221600221600994774Chlamydophila pneumoniae J138, complete genomediaminopimelate epimerase1e-0963.9
NC_016789:1495274:149527414952741496167894Corynebacterium diphtheriae PW8 chromosome, complete genomediaminopimelate epimerase2e-0963.5
NC_016799:1501578:150157815015781502471894Corynebacterium diphtheriae 31A chromosome, complete genomediaminopimelate epimerase2e-0963.5
NC_016801:1422500:149156514915651492458894Corynebacterium diphtheriae C7 (beta) chromosome, complete genomediaminopimelate epimerase2e-0963.5
NC_002935:1461458:146145814614581462351894Corynebacterium diphtheriae NCTC 13129, complete genomediaminopimelate epimerase2e-0963.5
NC_016782:1450674:144978414497841450677894Corynebacterium diphtheriae 241 chromosome, complete genomeDiaminopimelate epimerase2e-0963.5
NC_016783:1397975:147036914703691471262894Corynebacterium diphtheriae INCA 402 chromosome, complete genomeDiaminopimelate epimerase2e-0963.5
NC_016786:1359064:145004914500491450942894Corynebacterium diphtheriae HC01 chromosome, complete genomediaminopimelate epimerase2e-0963.5
NC_016785:1407892:142795114279511428895945Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomediaminopimelate epimerase1e-0963.5
NC_016790:1417421:141742114174211418314894Corynebacterium diphtheriae VA01 chromosome, complete genomediaminopimelate epimerase1e-0963.5
NC_014334:99000:1007731007731017801008Lactobacillus casei str. Zhang chromosome, complete genomediaminopimelate epimerase2e-0963.5
NC_016802:1317365:143457114345711435464894Corynebacterium diphtheriae HC02 chromosome, complete genomediaminopimelate epimerase2e-0963.5
NC_016800:1477937:147793714779371478830894Corynebacterium diphtheriae BH8 chromosome, complete genomediaminopimelate epimerase2e-0963.5
NC_009663:2500186:250506825050682505814747Sulfurovum sp. NBC37-1, complete genomediaminopimelate epimerase2e-0860.1
NC_015510:1709226:170922617092261710014789Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeDiaminopimelate epimerase5e-0858.5
NC_016605:132253:157477157477158466990Pediococcus claussenii ATCC BAA-344 chromosome, complete genomediaminopimelate epimerase6e-0755.1
NC_012039:53497:540895408954838750Campylobacter lari RM2100, complete genomediaminopimelate epimerase8e-0754.7