Pre_GI: BLASTP Hits

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Query: NC_002947:4484824:4508780 Pseudomonas putida KT2440, complete genome

Start: 4508780, End: 4510060, Length: 1281

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:3736104:3831520383152038328001281Pseudomonas putida S16 chromosome, complete genomeseryl-tRNA synthetase0863
NC_013851:1866523:1877506187750618787801275Allochromatium vinosum DSM 180 chromosome, complete genomeseryl-tRNA synthetase3e-168591
NC_011094:1050700:1052302105230210535941293Salmonella enterica subsp. enterica serovar Schwarzengrund strseryl-tRNA synthetase3e-168591
NC_010159:1668795:1668795166879516700871293Yersinia pestis Angola, complete genomeseryl-tRNA synthetase5e-168590
NC_014307:1131241:1145662114566211469781317Ralstonia solanacearum CFBP2957 chromosome, complete genomeserine tRNA synthetase; also charges selenocystein tRNA with serine7e-165580
NC_003295:2507850:2534810253481025361261317Ralstonia solanacearum GMI1000, complete genomeseryl-tRNA synthetase1e-164579
NC_012856:2266187:2280675228067522819911317Ralstonia pickettii 12D chromosome 1, complete genomeseryl-tRNA synthetase1e-162572
NC_010682:2642269:2656705265670526580211317Ralstonia pickettii 12J chromosome 1, complete sequenceseryl-tRNA synthetase3e-162571
NC_016002:1326500:1351185135118513524711287Pseudogulbenkiania sp. NH8B, complete genomeseryl-tRNA synthetase7e-162570
NC_016010:1822212:1823821182382118251011281Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeseryl-tRNA synthetase2e-161569
NC_009074:2914053:2930712293071229320131302Burkholderia pseudomallei 668 chromosome I, complete sequenceseryl-tRNA synthetase7e-161566
NC_003902:1858349:1862425186242518637051281Xanthomonas campestris pv. campestris str. ATCC 33913, completeseryl-tRNA synthetase2e-160565
NC_014315:2177277:2182520218252021838031284Nitrosococcus watsoni C-113 chromosome, complete genomeseryl-tRNA synthetase3e-160565
NC_015856:3170771:3193141319314131944901350Collimonas fungivorans Ter331 chromosome, complete genomeseryl-tRNA synthetase4e-154544
NC_002927:4130697:4150574415057441519291356Bordetella bronchiseptica RB50, complete genomeseryl-tRNA synthetase3e-152538
NC_017223:2618535:2637330263733026386851356Bordetella pertussis CS chromosome, complete genomeseryl-tRNA synthetase4e-152538
NC_015138:4205986:4227522422752242288411320Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeseryl-tRNA synthetase2e-147522
NC_013446:4281250:4296269429626942975851317Comamonas testosteroni CNB-2, complete genomeseryl-tRNA synthetase2e-147522
NC_015422:1116359:1120112112011211214281317Alicycliphilus denitrificans K601 chromosome, complete genomeSeryl-tRNA synthetase7e-147520
NC_008610:1068429:1074537107453710758261290Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),seryl-tRNA synthetase5e-146518
NC_008781:3508784:3532055353205535333891335Polaromonas naphthalenivorans CJ2, complete genomeseryl-tRNA synthetase5e-146517
NC_014931:5088125:5114458511445851157891332Variovorax paradoxus EPS chromosome, complete genomeseryl-tRNA synthetase2e-145515
NC_009465:938378:9415159415159428041290Candidatus Vesicomyosocius okutanii HA, complete genomeseryl-tRNA synthetase3e-141501
NC_019815:114288:1182781182781195821305Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiseryl-tRNA synthetase4e-138491
NC_002937:255790:2706662706662719401275Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeseryl-tRNA synthetase2e-136485
NC_014220:2398334:1325913259145301272Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeseryl-tRNA synthetase4e-135481
NC_016148:951446:9580159580159592861272Thermovirga lienii DSM 17291 chromosome, complete genomeseryl-tRNA synthetase5e-135481
NC_014976:2231984:2232896223289622341731278Bacillus subtilis BSn5 chromosome, complete genomeseryl-tRNA synthetase1e-134479
NC_011567:1:2161821618228981281Anoxybacillus flavithermus WK1, complete genomeSeryl-tRNA synthetase1e-133476
NC_017208:1:2022420224214981275Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeseryl-tRNA synthetase4e-133474
UCMB5137:1375622:1393525139352513948021278Bacillus atrophaeus UCMB-5137seryl-tRNA synthetase5e-133474
NC_014171:1:2044620446217201275Bacillus thuringiensis BMB171 chromosome, complete genomeseryl-tRNA synthetase2e-132473
NC_014152:1:1632816328175991272Thermincola sp. JR, complete genomeseryl-tRNA synthetase1e-132473
NC_002939:47406:4740647406486741269Geobacter sulfurreducens PCA, complete genomeseryl-tRNA synthetase3e-132472
NC_004668:3156247:3172906317290631741771272Enterococcus faecalis V583, complete genomeseryl-tRNA synthetase8e-129460
NC_015589:7678:2706427064283381275Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeseryl-tRNA synthetase3e-128458
NC_018665:1:2182421824231011278Exiguobacterium antarcticum B7 chromosome, complete genomeSeryl-tRNA synthetase8e-127453
NC_010556:6612:2187221872231491278Exiguobacterium sibiricum 255-15, complete genomeseryl-tRNA synthetase1e-126453
NC_014831:8965:1269712697139741278Thermaerobacter marianensis DSM 12885 chromosome, complete genomeseryl-tRNA synthetase6e-126451
NC_015520:224136:2413902413902426641275Mahella australiensis 50-1 BON chromosome, complete genomeseryl-tRNA synthetase3e-125449
NC_016894:1092005:1094783109478310960541272Acetobacterium woodii DSM 1030 chromosome, complete genomeseryl-tRNA synthetase SerS2e-125449
NC_019978:7535:2557525575268581284Halobacteroides halobius DSM 5150, complete genomeseryl-tRNA synthetase2e-125449
NC_009922:1:1890018900201771278Alkaliphilus oremlandii OhILAs, complete genomeseryl-tRNA synthetase6e-125447
NC_015519:245036:2586572586572599341278Tepidanaerobacter sp. Re1 chromosome, complete genomeSeryl-tRNA synthetase2e-124445
NC_004461:1:1164811648129341287Staphylococcus epidermidis ATCC 12228, complete genomeseryl-tRNA synthetase5e-123441
NC_019970:8938:2776127761290321272Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeseryl-tRNA synthetase6e-123441
NC_014410:8694:2750427504287751272Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,seryl-tRNA synthetase8e-123440
NC_014836:312353:3301653301653314571293Desulfurispirillum indicum S5 chromosome, complete genomeseryl-tRNA synthetase2e-122439
NC_013316:1:1771317713189841272Clostridium difficile R20291, complete genomeseryl-tRNA synthetase8e-122437
NC_009089:1:1795217952192231272Clostridium difficile 630, complete genomeseryl-tRNA synthetase9e-122437
NC_014926:1108811:1121592112159211228751284Thermovibrio ammonificans HB-1 chromosome, complete genomeseryl-tRNA synthetase5e-121434
NC_008686:2417000:2433457243345724347491293Paracoccus denitrificans PD1222 chromosome 1, complete sequenceseryl-tRNA synthetase1e-120433
NC_007644:3229:2198221982232651284Moorella thermoacetica ATCC 39073, complete genomeseryl-tRNA synthetase2e-120432
NC_010424:14657:1465714657159341278Candidatus Desulforudis audaxviator MP104C, complete genomeseryl-tRNA synthetase1e-119429
NC_018867:10238:1023810238115031266Dehalobacter sp. CF chromosome, complete genomeSeryl-tRNA synthetase5e-119427
NC_015975:267994:2719142719142731881275Lactobacillus ruminis ATCC 27782 chromosome, complete genomeSeryl-tRNA synthetase4e-118424
NC_006177:12383:1238312383136481266Symbiobacterium thermophilum IAM 14863, complete genomeseryl-tRNA synthetase4e-117421
NC_010483:1441614:1459212145921214604891278Thermotoga sp. RQ2, complete genomeseryl-tRNA synthetase6e-117421
NC_014393:19279:2122321223225031281Clostridium cellulovorans 743B chromosome, complete genomeseryl-tRNA synthetase1e-115417
NC_010674:1:1771017710189871278Clostridium botulinum B str. Eklund 17B, complete genomeseryl-tRNA synthetase1e-115416
NC_011653:466007:4824614824614837411281Thermosipho africanus TCF52B, complete genomeseryl-tRNA synthetase4e-115415
NC_008530:1551356:1582064158206415833741311Lactobacillus gasseri ATCC 33323, complete genomeSeryl-tRNA synthetase5e-115414
NC_009663:2023941:2027301202730120285451245Sulfurovum sp. NBC37-1, complete genomeseryl-tRNA synthetase3e-114412
NC_008783:507939:5283515283515296281278Bartonella bacilliformis KC583, complete genomeseryl-tRNA synthetase4e-114411
NC_013504:1468227:1496120149612014974301311Lactobacillus johnsonii FI9785 chromosome, complete genomehypothetical protein6e-114411
NC_007929:210088:2159732159732172501278Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSeryl-tRNA synthetase2e-113409
NC_005362:1651767:1686282168628216875921311Lactobacillus johnsonii NCC 533, complete genomeseryl-tRNA synthetase5e-113408
NC_015757:4680:1173811738130121275Sulfobacillus acidophilus TPY chromosome, complete genomeseryl-tRNA synthetase1e-111404
NC_015214:1700000:1714981171498117162881308Lactobacillus acidophilus 30SC chromosome, complete genomeseryl-tRNA synthetase9e-112404
NC_014724:1731238:1746213174621317475201308Lactobacillus amylovorus GRL 1112 chromosome, complete genomeseryl-tRNA synthetase9e-112404
NC_013205:19295:1929519295205751281Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,seryl-tRNA synthetase6e-110397
NC_014334:1775781:1787662178766217889451284Lactobacillus casei str. Zhang chromosome, complete genomeseryl-tRNA synthetase8e-110397
NC_018604:2350054:2352417235241723536971281Brachyspira pilosicoli WesB complete genomeseryl-tRNA synthetase1e-109397
NC_018528:1681060:1696420169642016977271308Lactobacillus helveticus R0052 chromosome, complete genomeseryl-tRNA ligase2e-109396
NC_010999:1979989:1991871199187119931541284Lactobacillus casei, complete genomeSeryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS)1e-109396
NC_010080:1685280:1699511169951117008181308Lactobacillus helveticus DPC 4571, complete genomeSeryl-tRNA synthetase1e-109396
NC_018607:2231975:2234339223433922356191281Brachyspira pilosicoli B2904 chromosome, complete genomeseryl-tRNA synthetase1e-109396
NC_014330:888366:8906938906938919731281Brachyspira pilosicoli 95/1000 chromosome, complete genomeseryl-tRNA synthetase1e-109396
NC_019908:2312194:2328457232845723297371281Brachyspira pilosicoli P43/6/78 chromosome, complete genomeseryl-tRNA synthetase1e-109396
NC_008526:1822000:1831033183103318323161284Lactobacillus casei ATCC 334, complete genomeSeryl-tRNA synthetase2e-109395
NC_013199:1886271:1897641189764118989241284Lactobacillus rhamnosus Lc 705, complete genomeseryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine-tRNA ligase) (SerRS)3e-108392
NC_015602:1339067:1352932135293213542391308Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeseryl-tRNA synthetase3e-108392
NC_007797:441782:4417824417824430681287Anaplasma phagocytophilum HZ, complete genomeseryl-tRNA synthetase6e-108391
NC_013198:1921500:1931359193135919326421284Lactobacillus rhamnosus GG, complete genomeSeryl-tRNA synthetase (Seryl-tRNA(Ser/Sec) synthetase) (Serine--tRNA ligase) (SerRS)6e-108391
NC_014314:576465:5843275843275855681242Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeseryl-tRNA synthetase3e-99362
NC_013743:375459:3939233939233953021380Haloterrigena turkmenica DSM 5511, complete genomeseryl-tRNA synthetase9e-98357
NC_007633:952728:9694519694519707191269Mycoplasma capricolum subsp. capricolum ATCC 27343, completeseryl-tRNA synthetase1e-96353
NC_014751:946155:9628959628959641631269Mycoplasma leachii PG50 chromosome, complete genomeserine--tRNA ligase3e-95348
NC_010085:1358772:1373878137387813751431266Nitrosopumilus maritimus SCM1, complete genomeseryl-tRNA synthetase8e-90331
NC_019974:192862:2093172093172106961380Natronococcus occultus SP4, complete genomeseryl-tRNA synthetase8e-89327
NC_009712:1446472:1468175146817514694521278Candidatus Methanoregula boonei 6A8, complete genomeseryl-tRNA synthetase6e-85315
NC_014448:183013:1849641849641862321269Mycoplasma hyorhinis HUB-1 chromosome, complete genomeSeryl-trna synthetase protein2e-81303
NC_015177:2795487:2839682283968228409531272Pedobacter saltans DSM 12145 chromosome, complete genomeseryl-tRNA synthetase4e-80298
NC_013715:98000:1167901167901180971308Rothia mucilaginosa DY-18, complete genomeseryl-tRNA synthetase9e-78291
NC_014820:71565:7424674246755021257Cenarchaeum symbiosum A, complete genomeseryl-tRNA synthetase1e-76287
NC_013222:299683:3790943790943803651272Robiginitalea biformata HTCC2501, complete genomeseryl-tRNA synthetase8e-76284
NC_015638:877233:8796358796358809061272Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeseryl-tRNA synthetase1e-75283
NC_019942:596000:6042676042676055861320Aciduliprofundum sp. MAR08-339, complete genomeseryl-tRNA synthetase9e-75281
NC_016516:2314115:2333332233333223346061275Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeseryl-tRNA synthetase1e-73277
NC_016511:2321999:2342473234247323437471275Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeseryl-tRNA synthetase1e-73277
NC_014039:2320307:2339541233954123408151275Propionibacterium acnes SK137 chromosome, complete genomeserine--tRNA ligase1e-73277
NC_006085:2384892:2404111240411124053851275Propionibacterium acnes KPA171202, complete genomeseryl-tRNA synthetase1e-73277
NC_016512:2322598:2341815234181523430891275Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeseryl-tRNA synthetase1e-72274
NC_013093:125363:1253631253631266131251Actinosynnema mirum DSM 43827, complete genomeseryl-tRNA synthetase8e-73274
NC_013714:570329:5745645745645758501287Bifidobacterium dentium Bd1, complete genomeserS Seryl-tRNA synthetase3e-71269
NC_015125:2288487:2289942228994222912071266Microbacterium testaceum StLB037, complete genomeseryl-tRNA synthetase3e-70266
NC_003106:1457802:1469902146990214712631362Sulfolobus tokodaii str. 7, complete genomeseryl-tRNA synthetase4e-70265
NC_011565:750168:7704797704797717531275Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,seryl-tRNA synthetase1e-69264
NC_008818:1244612:1255765125576512571471383Hyperthermus butylicus DSM 5456, complete genomeSeryl-tRNA synthetase7e-68258
NC_012622:1395601:1402643140264314040161374Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeseryl-tRNA synthetase3e-67255
NC_012589:1502390:1513270151327015146431374Sulfolobus islandicus L.S.2.15, complete genomeseryl-tRNA synthetase9e-67254
NC_012623:1141951:1154076115407611554491374Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeseryl-tRNA synthetase9e-67254
NC_012632:1543735:1549715154971515510881374Sulfolobus islandicus M.16.27 chromosome, complete genomeseryl-tRNA synthetase9e-67254
NC_013769:1478546:1509741150974115111141374Sulfolobus islandicus L.D.8.5 chromosome, complete genomeseryl-tRNA synthetase9e-67254
NC_017275:1436875:1468071146807114694441374Sulfolobus islandicus HVE10/4 chromosome, complete genomeseryl-tRNA synthetase9e-67254
NC_012588:1419318:1425298142529814266711374Sulfolobus islandicus M.14.25 chromosome, complete genomeseryl-tRNA synthetase1e-66253
NC_014374:264563:2653472653472667261380Acidilobus saccharovorans 345-15 chromosome, complete genomeSeryl-tRNA synthetase2e-64246
NC_013172:783097:7852847852847865551272Brachybacterium faecium DSM 4810, complete genomeseryl-tRNA synthetase5e-63242
NC_015931:1405859:1411536141153614129271392Pyrolobus fumarii 1A, complete genomeseryl-tRNA synthetase8e-63241
NC_002754:513790:5264025264025277751374Sulfolobus solfataricus P2, complete genomeseryl-tRNA synthetase4e-62239
NC_014499:63365:6718067180682081029Candidatus Sulcia muelleri CARI chromosome, complete genomeseryl-tRNA synthetase1e-58227
NC_013123:59918:5991859918611951278Candidatus Sulcia muelleri SMDSEM, complete genomeseryl-tRNA synthetase1e-49197
NC_005213:202400:2800442800442814981455Nanoarchaeum equitans Kin4-M, complete genomeseryl-tRNA synthetase2e-35150
NC_015422:1116359:113330111333011133432132Alicycliphilus denitrificans K601 chromosome, complete genome1e-1068.2
NC_012779:610509:6158396158396175571719Edwardsiella ictaluri 93-146, complete genomeprolyl-tRNA synthetase, putative2e-0653.9