Pre_GI: BLASTP Hits

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Query: NC_002947:4362271:4378171 Pseudomonas putida KT2440, complete genome

Start: 4378171, End: 4378710, Length: 540

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4931104:494128749412874941826540Pseudomonas putida ND6 chromosome, complete genomeendolysin3e-86317
NC_015733:1398083:140619214061921406692501Pseudomonas putida S16 chromosome, complete genomeendolysin1e-84311
NC_011283:2836000:289756728975672898046480Klebsiella pneumoniae 342 chromosome, complete genomephage lysozyme4e-35147
NC_009800:289000:309479309479309955477Escherichia coli HS, complete genomephage lysozyme5e-34143
NC_003198:1908238:191258519125851913061477Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative endolysin6e-34143
NC_013941:3182576:318534331853433185819477Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeLysozyme1e-33142
NC_017328:303987:325599325599326075477Shigella flexneri 2002017 chromosome, complete genomeR protein1e-33142
NC_012125:1330066:135294813529481353421474Salmonella enterica subsp. enterica serovar Paratyphi C strainlysin1e-33142
NC_012947:3015985:301644330164433016919477Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeLysozyme4e-33140
NC_006905:368942:391670391670392146477Salmonella enterica subsp. enterica serovar Choleraesuis strlysin5e-33140
NC_020063:2565605:257210025721002572576477Enterobacteriaceae bacterium strain FGI 57, complete genomemuramidase (phage lambda lysozyme)8e-32136
NC_012912:1701231:174462217446221745113492Dickeya zeae Ech1591, complete genomeLysozyme3e-27120
NC_014500:3097362:310176631017663102254489Dickeya dadantii 3937 chromosome, complete genomeLysozyme3e-25114
NC_012880:2480000:249635024963502496841492Dickeya dadantii Ech703, complete genomeLysozyme1e-24112
NC_009648:3803622:381947238194723819969498Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage endolysin, control of lysis2e-23108
NC_013592:1668092:168477516847751685266492Dickeya dadantii Ech586, complete genomeLysozyme2e-23108
NC_008390:2018201:203513820351382035590453Burkholderia cepacia AMMD chromosome 1, complete sequenceglycoside hydrolase, family 244e-23107
NC_008314:1465643:146609414660941466729636Ralstonia eutropha H16 chromosome 2, complete sequenceMuramidase (phage lysozyme)2e-21101
NC_015137:2582467:258418625841862584836651Burkholderia sp. CCGE1001 chromosome 2, complete sequenceglycoside hydrolase family 246e-1993.6
NC_008820:1356858:136004013600401360840801Prochlorococcus marinus str. MIT 9303, complete genomepossible endolysin2e-1788.6
NC_005071:704882:720843720843721619777Prochlorococcus marinus str. MIT 9313, complete genomepossible endolysin2e-1788.2
NC_008319:1306482:130971713097171310460744Synechococcus sp. CC9311, complete genomepossible endolysin3e-1581.3
NC_009481:764382:765098765098765721624Synechococcus sp. WH 7803 chromosome, complete genomemuramidase3e-1581.3
NC_014500:2019113:2037269203726920389631695Dickeya dadantii 3937 chromosome, complete genomeLysozyme5e-1580.5
NC_013592:2703327:2710622271062227123161695Dickeya dadantii Ech586, complete genomeglycoside hydrolase family 249e-1579.7
NC_007513:987969:101201210120121012686675Synechococcus sp. CC9902, complete genomepossible muramidase, COG46782e-1478.6
NC_009937:4090404:4111154411115441134842331Azorhizobium caulinodans ORS 571, complete genomeputative muramidase3e-0754.7
NC_014733:1223359:124555012455501246419870Methylovorus sp. MP688 chromosome, complete genomepaar repeat-containing protein4e-0754.3