Pre_GI: BLASTP Hits

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Query: NC_002947:4362271:4368119 Pseudomonas putida KT2440, complete genome

Start: 4368119, End: 4369228, Length: 1110

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:3697173:3704398370439837055011104Pseudomonas fluorescens F113 chromosome, complete genomeperiplasmic spermidine putrescine-binding protein2e-127455
NC_015379:3175500:3183989318398931850921104Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative putrescine-binding periplasmic protein precursor4e-127454
NC_008027:3844355:3863214386321438643171104Pseudomonas entomophila L48, complete genomeABC transporter, periplasmic polyamine-binding protein2e-126452
NC_004129:3123000:3128254312825431293421089Pseudomonas fluorescens Pf-5, complete genomeputrescine ABC transporter, periplasmic putrescine-binding protein6e-122437
NC_021150:4929670:4936824493682449379391116Azotobacter vinelandii CA6, complete genomePolyamine transporter periplasmic protein PotF2e-104379
NC_012560:4929683:4936837493683749379521116Azotobacter vinelandii DJ, complete genomePolyamine transporter periplasmic protein PotF2e-104379
NC_015379:6714545:6732759673275967338591101Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative ABC transporter, periplasmic component2e-101369
NC_016612:3361802:3379230337923033803421113Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputrescine ABC transporter periplasmic-binding protein4e-101368
NC_009512:1025365:1028350102835010294291080Pseudomonas putida F1, complete genomeextracellular solute-binding protein, family 11e-100366
NC_009831:1255995:1257662125766212587621101Shewanella sediminis HAW-EB3, complete genomeextracellular solute-binding protein, family 18e-97353
NC_009439:101174:1242421242421253361095Pseudomonas mendocina ymp, complete genomeextracellular solute-binding protein6e-96351
NC_004129:3965947:3982527398252739836271101Pseudomonas fluorescens Pf-5, complete genomeputrescine ABC transporter, periplasmic putrescine-binding protein2e-84312
NC_002947:4167500:4241729424172942428321104Pseudomonas putida KT2440, complete genomeperiplasmic polyamine-binding protein, putative5e-82305
NC_020829:940692:9802589802589813701113Pseudomonas denitrificans ATCC 13867, complete genomeextracellular solute-binding protein3e-68259
NC_008781:2981868:3003498300349830046581161Polaromonas naphthalenivorans CJ2, complete genomeextracellular solute-binding protein, family 11e-64246
NC_011666:1923776:1937462193746219385711110Methylocella silvestris BL2, complete genomeextracellular solute-binding protein family 11e-58227
NC_009718:1470972:1474505147450514755391035Fervidobacterium nodosum Rt17-B1, complete genomeextracellular solute-binding protein6e-47188
NC_009922:2721343:2741311274131127423571047Alkaliphilus oremlandii OhILAs, complete genomeextracellular solute-binding protein family 16e-47188
NC_019897:3810000:3812967381296738140371071Thermobacillus composti KWC4 chromosome, complete genomespermidine/putrescine-binding periplasmic protein2e-44180
NC_012914:469117:4691174691174701871071Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 12e-42173
NC_013716:1298932:1302979130297913040251047Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, substrate-binding protein3e-42172
NC_010483:1441614:1463190146319014642001011Thermotoga sp. RQ2, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein8e-41167
NC_010498:1995500:2023681202368120247271047Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein1e-40167
NC_008309:1155218:1155218115521811562551038Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein1e-40167
NC_014206:2941575:2955729295572929568021074Geobacillus sp. C56-T3 chromosome, complete genomefamily 1 extracellular solute-binding protein2e-40166
NC_016593:762216:7679087679087689811074Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completespermidine/putrescine-binding periplasmic protein4e-40165
NC_006510:746814:7525867525867536591074Geobacillus kaustophilus HTA426, complete genomespermidine/putrescine ABC transporter (substrate-binding protein)6e-40165
NC_004461:779000:7919067919067929791074Staphylococcus epidermidis ATCC 12228, complete genomepotD protein1e-39164
NC_008312:4358134:4377026437702643780901065Trichodesmium erythraeum IMS101, complete genomeextracellular solute-binding protein, family 12e-38160
NC_020134:1328302:1342631134263113436891059Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine/putrescine transport system substarte-binding protein PotD5e-38158
NC_013173:2305394:2305394230539423064311038Desulfomicrobium baculatum DSM 4028, complete genomeextracellular solute-binding protein family 18e-38157
NC_016944:1504888:1518920151892015199571038Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein1e-37157
NC_016445:984856:9988879988879999241038Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine transport system substrate-binding protein1e-37157
NC_012668:2115228:2121142212114221221791038Vibrio cholerae MJ-1236 chromosome 1, complete sequenceputrescine ABC transporter putrescine-binding protein PotF1e-37157
NC_012578:1465302:1479334147933414803711038Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein1e-37157
NC_009457:1068000:1080309108030910813461038Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein1e-37157
NC_002505:1507860:1521892152189215229291038Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein1e-37157
NC_014221:38000:5405354053551231071Truepera radiovictrix DSM 17093 chromosome, complete genomeextracellular solute-binding protein family 12e-37156
NC_007929:111092:1330981330981341831086Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSpermidine/putrescine-binding protein5e-37155
NC_020829:4390417:440740144074014408384984Pseudomonas denitrificans ATCC 13867, complete genomeputative periplasmic polyamine binding protein3e-36152
NC_010278:398521:4181284181284192101083Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,spermidine/putrescine-binding periplasmic protein4e-36152
NC_009053:393700:4134014134014144831083Actinobacillus pleuropneumoniae L20, complete genomespermidine/putrescine-binding periplasmic protein 1 precursor4e-36152
NC_008309:1289370:1310334131033413114191086Haemophilus somnus 129PT, complete genomespermidine/putrescine-binding periplasmic protein1e-35150
NC_010519:1802294:1824678182467818257631086Haemophilus somnus 2336 chromosome, complete genomeextracellular solute-binding protein2e-35150
NC_010939:405477:4411834411834422651083Actinobacillus pleuropneumoniae serovar 7 str. AP76, completespermidine/putrescine-binding periplasmic protein 1 precursor7e-35148
NC_009672:30000:3000930009311631155Ochrobactrum anthropi ATCC 49188 plasmid pOANT04, completeextracellular solute-binding protein1e-34147
NC_007650:84140:9424394243952741032Burkholderia thailandensis E264 chromosome II, complete sequenceputrescine ABC transporter, periplasmic putrescine-binding protein, putative2e-34147
NC_015385:2135456:2153331215333121543801050Treponema succinifaciens DSM 2489 chromosome, complete genomeextracellular solute-binding protein family 15e-34145
NC_009078:74954:8604786047870781032Burkholderia pseudomallei 1106a chromosome II, complete sequenceABC transport system, exported substrate-binding protein9e-34144
NC_007435:1914375:1924940192494019262981359Burkholderia pseudomallei 1710b chromosome II, complete sequenceputative ABC transport system, exported substrate-binding protein1e-33144
NC_016048:1930089:1955292195529219563651074Oscillibacter valericigenes Sjm18-20, complete genomespermidine/putrescine ABC transporter spermidine/putrescine-binding protein3e-30132
NC_013515:65822:8754687546885951050Streptobacillus moniliformis DSM 12112, complete genomeextracellular solute-binding protein family 15e-30132
NC_016445:984856:1000036100003610010671032Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein2e-28127
NC_016944:1504888:1520069152006915211001032Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine transport system substrate-binding protein2e-28127
NC_002505:1507860:1523041152304115241411101Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter, periplasmic spermidine/putrescine-binding protein2e-28127
NC_012578:1465302:1480483148048314815831101Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter substrate-binding protein2e-28127
NC_009075:92210:1059791059791070101032Burkholderia pseudomallei 668 chromosome II, complete sequenceputative ABC transporter, periplasmic solute-binding protein1e-28127
NC_006351:73000:8666886668876991032Burkholderia pseudomallei K96243 chromosome 2, complete sequenceABC transport system, exported substrate-binding protein1e-28127
NC_012668:2115228:2119984211998421210301047Vibrio cholerae MJ-1236 chromosome 1, complete sequenceABC transporter periplasmic spermidine putrescine-binding protein PotD2e-28126
NC_009457:1068000:1081457108145710825571101Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter periplasmic spermidine/putrescine-binding protein2e-28126
NC_008044:857759:8797618797618807861026Silicibacter sp. TM1040, complete genomeextracellular solute-binding protein, family 11e-25117
NC_002678:5714000:5723382572338257244641083Mesorhizobium loti MAFF303099, complete genomeABC transporter, binding protein1e-23110
NC_016113:1143580:1142327114232711435831257Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequenceABC transporter substrate-binding protein2e-1893.6
NC_020063:2343813:2362308236230823634531146Enterobacteriaceae bacterium strain FGI 57, complete genomespermidine/putrescine-binding periplasmic protein6e-1685.5
NC_007492:1193626:1214276121427612154271152Pseudomonas fluorescens PfO-1, complete genomeextracellular solute-binding protein, family 13e-1583.2
NC_017059:3404000:3404073340407334052271155Rhodospirillum photometricum DSM 122, complete genomeSpermidine/putrescine-binding periplasmic protein9e-1581.6
NC_008786:3681847:3690955369095536921061152Verminephrobacter eiseniae EF01-2, complete genomeextracellular solute-binding protein, family 14e-1479.3
NC_015276:2948923:2954973295497329561241152Marinomonas mediterranea MMB-1 chromosome, complete genomeextracellular solute-binding protein family 15e-1479
NC_015559:1478114:1486459148645914876101152Marinomonas posidonica IVIA-Po-181 chromosome, complete genomefamily 1 extracellular solute-binding protein7e-1478.6
NC_008209:253663:2723772723772734831107Roseobacter denitrificans OCh 114, complete genomespermidine/putrescine-binding periplasmic protein, putative1e-1274.3
NC_011985:194973:2123562123562133961041Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter1e-1068.2
NC_016590:548312:5483125483125494121101Burkholderia sp. YI23 chromosome 3, complete sequenceextracellular solute-binding protein1e-1067.8
NC_018000:1914945:1920839192083919219511113Sinorhizobium fredii USDA 257 chromosome, complete genomeABC transporter substrate-binding protein5e-0962.4
NC_009512:27783:283622836228511150Pseudomonas putida F1, complete genome2e-0757.4
NC_017150:2290681:2318414231841423195441131Acetobacter pasteurianus IFO 3283-01-42C, complete genometransporter substrate-binding periplasmic protein2e-0653.9
NC_016641:1148220:1148220114822011492931074Paenibacillus terrae HPL-003 chromosome, complete genomeABC transporter substrate-binding protein4e-0652.8