Pre_GI: BLASTP Hits

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Query: NC_002947:3492379:3496225 Pseudomonas putida KT2440, complete genome

Start: 3496225, End: 3496800, Length: 576

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:3084834:310052431005243101063540Pseudomonas putida GB-1 chromosome, complete genometype VI secretion protein2e-96351
NC_012779:2619871:263175226317522632264513Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-57220
NC_014323:4619344:463448546344854634985501Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein3e-55214
NC_015381:429940:449990449990450508519Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-53208
NC_014310:785220:805843805843806355513Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein7e-53206
NC_007510:409843:424831424831425346516Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein3e-51201
NC_006350:3710641:371272437127243713242519Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein5e-51200
NC_009074:3559211:356183435618343562352519Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein5e-51200
NC_008390:407315:425833425833426348516Burkholderia cepacia AMMD chromosome 1, complete sequenceUncharacterised conserved protein UCP0283019e-51199
NC_014355:1865003:188945418894541889987534Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-49196
NC_012997:1689583:171040317104031710924522Teredinibacter turnerae T7901, complete genometype VI secretion protein, VC_A0107 family2e-44177
NC_018868:973379:979090979090979608519Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometype VI secretion protein2e-43175
NC_008314:2744553:274894927489492749485537Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein2e-38158
NC_015963:117178:139229139229139735507Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencetype VI secretion protein6e-38156
NC_008391:271254:273986273986274528543Burkholderia cepacia AMMD chromosome 2, complete sequenceUncharacterised conserved protein UCP0283016e-36150
NC_008313:691692:694446694446694979534Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein2e-35148
NC_007511:1094050:109676810967681097307540Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein9e-35146
NC_011748:3360967:338712233871223387598477Escherichia coli 55989, complete genomehypothetical protein1e-34145
CU928145:3360967:338712233871223387598477Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-34145
NC_006351:101500:117729117729118268540Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein2e-34145
NC_007435:1914375:195619519561951956734540Burkholderia pseudomallei 1710b chromosome II, complete sequencehypothetical protein2e-34145
NC_006155:751235:760224760224760784561Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-33142
NC_010159:770172:778332778332778892561Yersinia pestis Angola, complete genomehypothetical protein2e-33142
NC_004088:4073698:408431840843184084878561Yersinia pestis KIM, complete genomehypothetical protein2e-33142
NC_010634:732016:741984741984742544561Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein2e-33142
NC_010465:3919572:392774039277403928300561Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0107 family2e-33142
NC_005810:4183297:419146541914654192025561Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-33142
NC_003143:524755:533725533725534285561Yersinia pestis CO92, complete genomehypothetical protein2e-33142
NC_008150:4601202:461196246119624612522561Yersinia pestis Antiqua, complete genomehypothetical protein2e-33142
NC_008149:442168:452928452928453488561Yersinia pestis Nepal516, complete genomehypothetical protein2e-33142
NC_009381:3558018:356618635661863566746561Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-33142
NC_010086:871723:874441874441874980540Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion protein, VC_A0107 family1e-33142
NC_010805:1576735:160032416003241600863540Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein1e-33142
NC_017265:3861259:387120838712083871768561Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-33142
NC_017168:561402:569570569570570130561Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-33142
NC_017160:520799:531559531559532119561Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-33142
NC_017154:520400:529370529370529930561Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-33142
NC_014029:576459:587219587219587779561Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-33142
NC_009708:3862044:387266438726643873224561Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-33142
NC_020064:2921809:292738729273872927926540Serratia marcescens FGI94, complete genometype VI secretion protein, VC_A0107 family3e-33141
NC_014306:679888:685322685322685849528Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein5e-33140
NC_016816:1823127:182859518285951829125531Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein7e-32136
NC_012721:137046:157164157164157697534Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-31135
NC_020211:3398281:340889034088903409447558Serratia marcescens WW4, complete genometype VI secretion protein, TssB family4e-30130
NC_016590:1183470:120183312018331202345513Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein3e-21101
NC_010552:592154:596614596614597126513Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, VC_A0107 family8e-1993.2
NC_010159:172469:187605187605188105501Yersinia pestis Angola, complete genomehypothetical protein1e-1892.8
NC_014118:1171411:118624111862411186753513Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion protein, VC_A0107 family1e-1892.8
NC_012721:1395417:141388414138841414396513Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-1892.4
NC_006155:1756000:177579217757921776292501Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-1892
NC_008149:2802392:282679628267962827296501Yersinia pestis Nepal516, complete genomehypothetical protein2e-1892
NC_008149:3556999:358189535818953582395501Yersinia pestis Nepal516, complete genomehypothetical protein2e-1892
NC_006155:3805640:383200638320063832506501Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-1892
NC_010634:1755548:177601417760141776514501Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein2e-1892
NC_008150:317903:331730331730332230501Yersinia pestis Antiqua, complete genomehypothetical protein2e-1892
NC_003143:1059580:108591110859111086411501Yersinia pestis CO92, complete genomehypothetical protein2e-1892
NC_009708:2788855:284441228444122844912501Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-1892
NC_009708:874770:887643887643888143501Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-1892
NC_014029:961522:974415974415974915501Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-1892
NC_017154:902739:916567916567917067501Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-1892
NC_017160:905783:918676918676919176501Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-1892
NC_017168:3286:188631886319363501Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-1892
NC_017265:2586729:261113326111332611633501Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-1892
NC_017265:809943:822831822831823331501Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-1892
NC_004088:2966331:299073229907322991235504Yersinia pestis KIM, complete genomehypothetical protein2e-1892
NC_004088:3689000:371401837140183714521504Yersinia pestis KIM, complete genomehypothetical protein2e-1892
NC_009708:915814:932854932854933354501Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-1891.7
NC_010159:3120642:313856831385683139068501Yersinia pestis Angola, complete genomehypothetical protein2e-1891.7
NC_005810:3917254:393282439328243933327504Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-1891.3
NC_012962:3568046:360088136008813601540660Photorhabdus asymbiotica, complete genomehypothetical protein4e-1891.3
NC_010067:2529750:255838125583812558878498Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1788.6
NC_010634:3720214:374508137450813745581501Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein4e-1787.8
NC_008150:844727:870258870258870758501Yersinia pestis Antiqua, complete genomehypothetical protein4e-1787.8
NC_003143:1630000:165639416563941656894501Yersinia pestis CO92, complete genomehypothetical protein4e-1787.8
NC_010465:2820500:285597228559722856472501Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0107 family4e-1787.8
NC_005810:1467772:148530214853021485805504Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-1787.8
NC_010465:893921:906784906784907284501Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0107 family4e-1787.8
NC_009381:1682000:170807117080711708571501Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-1787.8
NC_009381:588137:601013601013601513501Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-1787.8
NC_014029:1702338:172591017259101726410501Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-1787.8
NC_017154:1644404:166797716679771668477501Yersinia pestis D106004 chromosome, complete genomehypothetical protein4e-1787.8
NC_017160:1628500:164847216484721648972501Yersinia pestis D182038 chromosome, complete genomehypothetical protein4e-1787.8
NC_017168:3977767:400217740021774002677501Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-1787.8
NC_015559:2745570:274557027455702746085516Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion lipoprotein4e-1787.8
NC_007348:2011957:201785920178592018365507Ralstonia eutropha JMP134 chromosome 2, complete sequencehypothetical protein6e-1787
NC_009832:1946401:195894919589491959446498Serratia proteamaculans 568, complete genomehypothetical protein2e-1685.1
NC_009778:1956225:197844619784461978958513Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-1683.6
NC_012721:240000:245401245401245859459Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-1582.4
NC_016845:2306744:232623723262372326728492Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-1582.4
NC_010501:3575726:360312936031293603632504Pseudomonas putida W619, complete genometype VI secretion protein, VC_A0107 family2e-1582
NC_020181:969599:987040987040987531492Enterobacter aerogenes EA1509E, complete genomeUncharacterized protein ImpB2e-1582
NC_015663:4447984:444956244495624450053492Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpB2e-1582
NC_020260:1993344:200759120075912008268678Cronobacter sakazakii Sp291, complete genometype VI secretion protein4e-1581.3
NC_012731:2261787:226918622691862269764579Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-1478.6
NC_009348:2631759:263548426354842635987504Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein4e-1477.8
NC_007517:306508:309957309957310445489Geobacter metallireducens GS-15, complete genomehypothetical protein5e-1477.4
NC_008570:1986466:199870419987041999207504Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein7e-1477
NC_009802:114749:137747137747138232486Campylobacter concisus 13826, complete genometype VI secretion protein, family9e-1476.6
NC_011274:1129686:113372011337201134232513Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein9e-1476.6
NC_011149:1110642:111281811128181113321504Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion protein, family1e-1376.3
NC_011741:256932:258717258717259217501Escherichia coli IAI1 chromosome, complete genomehypothetical protein2e-1375.5
CU928160:256932:258717258717259217501Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein2e-1375.5
NC_004578:2797493:280766528076652808165501Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-1375.1
NC_016822:267758:271817271817272317501Shigella sonnei 53G, complete genomehypothetical protein3e-1375.1
NC_015968:4117835:415436641543664154884519Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein3e-1374.7
NC_013592:1424560:143851714385171439020504Dickeya dadantii Ech586, complete genometype VI secretion protein, VC_A0107 family5e-1374.3
NC_009656:3733913:374442337444233744929507Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-1373.6
NC_013941:261094:262879262879263379501Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein9e-1373.2
NC_016612:5600177:562227256222725622769498Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion protein9e-1373.2
NC_013008:261226:262927262927263427501Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-1272.8
NC_011353:261220:262921262921263421501Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein1e-1272.8
NC_002695:261235:262936262936263436501Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-1272.8
NC_002655:261236:262937262937263437501Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-1272.8
NC_012913:1832500:183793718379371838434498Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein, family8e-1270.1
NC_013421:1143500:115781711578171158320504Pectobacterium wasabiae WPP163, complete genometype VI secretion protein, VC_A0107 family1e-1169.7
NC_008369:1083598:110141811014181102008591Francisella tularensis subsp. holarctica OSU18, complete genomeintracellular growth locus A protein1e-0756.2
NC_007880:1079634:109749110974911098045555Francisella tularensis subsp. holarctica, complete genomeintracellular growth locus, subunit A2e-0755.5
NC_011751:256830:260614260614261117504Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-0755.1
NC_014623:2216825:223722522372252237845621Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeintracellular growth locus subunit a6e-0753.9
NC_008253:257059:261856261856262359504Escherichia coli 536, complete genomehypothetical protein6e-0753.9
NC_008563:258725:262509262509263012504Escherichia coli APEC O1, complete genomehypothetical protein6e-0753.9
NC_007946:258747:262531262531263034504Escherichia coli UTI89, complete genomehypothetical protein6e-0753.9
NC_011745:258727:262511262511263065555Escherichia coli ED1a chromosome, complete genomehypothetical protein9e-0753.5
NC_011742:258746:262530262530263084555Escherichia coli S88 chromosome, complete genomehypothetical protein9e-0753.5