Pre_GI: BLASTP Hits

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Query: NC_002947:3492379:3491345 Pseudomonas putida KT2440, complete genome

Start: 3491345, End: 3492415, Length: 1071

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010322:3084834:3104873310487331059431071Pseudomonas putida GB-1 chromosome, complete genometype VI secretion protein0690
NC_007963:2555012:255402325540232555015993Chromohalobacter salexigens DSM 3043, complete genomeprotein of unknown function DUF13056e-111400
NC_012779:2619871:2637980263798026390051026Edwardsiella ictaluri 93-146, complete genomehypothetical protein6e-58224
NC_014355:1865003:1896587189658718976511065Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-55217
NC_017075:2689014:2707126270712627081961071Rubrivivax gelatinosus IL144, complete genomehypothetical protein1e-49197
NC_010084:3173757:3200421320042132015211101Burkholderia multivorans ATCC 17616 chromosome 1, completetype VI secretion protein1e-47190
NC_007510:409843:4298524298524309521101Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF13051e-46187
NC_008390:407315:4308534308534319531101Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF13058e-47187
NC_014323:4619344:4628948462894846300361089Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein3e-45182
NC_016514:2713834:2771045277104527720881044Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein9e-40164
NC_012997:1689583:1703569170356917046841116Teredinibacter turnerae T7901, complete genometype VI secretion protein, VC_A0111 family4e-39162
NC_014306:679888:6994466994467005101065Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein5e-38158
NC_020064:2921809:2942381294238129434511071Serratia marcescens FGI94, complete genometype VI secretion protein, VC_A0111 family1e-37157
NC_018868:973379:9849389849389860801143Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein6e-37155
NC_007511:1780500:1799185179918518002881104Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF13056e-35148
NC_015663:4129685:4146811414681141478541044Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpH2e-34147
NC_009832:3313058:3313058331305833141311074Serratia proteamaculans 568, complete genomeprotein of unknown function DUF13057e-34144
NC_013855:196778:2011962011962022331038Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein2e-33143
NC_010625:670482:6729496729496740371089Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetype VI secretion protein, VC_A0111 family2e-33143
NC_015136:813701:8148068148068177632958Burkholderia sp. CCGE1001 chromosome 1, complete sequencetype VI secretion protein3e-31136
NC_016816:1823127:1842920184292018439691050Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein3e-31135
NC_015963:117178:134051134051135004954Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencetype VI secretion protein2e-30133
NC_009079:402891:4028914028914043691479Burkholderia mallei NCTC 10247 chromosome I, complete sequencehypothetical protein9e-30131
NC_008835:1827905:1830848183084818323261479Burkholderia mallei NCTC 10229 chromosome I, complete sequencehypothetical protein9e-30131
NC_013421:1143500:116200111620011162999999Pectobacterium wasabiae WPP163, complete genometype VI secretion protein, VC_A0111 family1e-29130
NC_008570:1986466:200289620028962003894999Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein2e-29129
NC_009348:2631759:2630791263079126317951005Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein3e-28126
NC_011748:3360967:338197533819753382934960Escherichia coli 55989, complete genomehypothetical protein4e-28125
CU928145:3360967:338197533819753382934960Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein4e-28125
NC_013592:1424560:1442701144270114437141014Dickeya dadantii Ech586, complete genometype VI secretion protein, VC_A0111 family4e-27122
NC_009255:1250939:1277183127718312781991017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein2e-25117
NC_009255:2044291:2044291204429120453071017Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein2e-25117
NC_014539:3619511:3618414361841436195141101Burkholderia sp. CCGE1003 chromosome 1, complete sequencetype VI secretion protein1e-25117
NC_014228:4331327:4351521435152143525731053Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of the SST VI cluster)5e-25115
NC_009656:3733913:3739524373952437405311008Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein7e-25114
NC_016822:267758:2667122667122677941083Shigella sonnei 53G, complete genomehypothetical protein2e-24113
NC_002947:4604582:4606312460631246073281017Pseudomonas putida KT2440, complete genomehypothetical protein3e-24113
NC_013892:274297:2742972742972753491053Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-24112
NC_011274:1129686:1128634112863411297281095Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein9e-24111
NC_013282:1256769:1263587126358712646511065Cronobacter turicensis, complete genomehypothetical protein1e-23110
NC_011988:1036618:1063957106395710649671011Agrobacterium vitis S4 chromosome 2, complete genomehypothetical protein1e-22107
NC_004578:2797493:2811942281194228129491008Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein2e-22106
NC_012913:1832500:184208218420821843080999Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein, family6e-22105
NC_015968:4117835:414967541496754150631957Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein5e-22105
NC_016626:400080:4282424282424293061065Burkholderia sp. YI23 plasmid byi_1p, complete sequencetype VI secretion protein4e-22105
NC_014121:1822895:1842623184262318437081086Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpH2e-21103
NC_007952:495000:5085315085315095891059Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein5e-21102
NC_010552:592154:6143696143696154931125Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, VC_A0111 family2e-20100
NC_005126:349658:395492395492396472981Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-20100
NC_015062:130359:1485221485221496041083Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion protein, VC_A0111 family1e-20100
NC_017060:125480:1453521453521464341083Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion protein1e-20100
NC_008314:2744553:2743552274355227445981047Ralstonia eutropha H16 chromosome 2, complete sequencequinoprotein dehydrogenase3e-2099.8
NC_008253:257059:2570592570592581081050Escherichia coli 536, complete genomehypothetical protein5e-2099
NC_011751:256830:2558172558172568661050Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1997.8
NC_011745:258727:2577142577142587631050Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1997.4
NC_014306:4376012:4395682439568243967071026Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein2e-1997.1
NC_012962:4427000:4432530443253044335611032Photorhabdus asymbiotica, complete genomehypothetical protein2e-1996.7
NC_011742:258746:2577332577332587821050Escherichia coli S88 chromosome, complete genomehypothetical protein8e-1994.7
NC_007946:258747:2577342577342587831050Escherichia coli UTI89, complete genomehypothetical protein8e-1994.7
NC_008563:258725:2577122577122587611050Escherichia coli APEC O1, complete genomehypothetical protein8e-1994.7
NC_009648:3476000:3494988349498834960701083Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein9e-1994.7
NC_011283:942594:9435379435379446191083Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein1e-1894.4
NC_013971:465318:4670514670514681331083Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein2e-1893.6
NC_017192:2216914:224035322403532241345993Arcobacter sp. L, complete genomehypothetical protein3e-1893.2
NC_013282:2026083:2055691205569120567731083Cronobacter turicensis, complete genomehypothetical protein3e-1893.2
NC_012731:2302974:2326872232687223279571086Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-1893.2
NC_011742:3057444:3060870306087030619581089Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1790.9
NC_012721:1395417:1394299139429913954201122Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein3e-1789.7
NC_008253:2965573:2969200296920029702791080Escherichia coli 536, complete genomehypothetical protein4e-1789.4
NC_011283:2103500:2121133212113321222241092Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein1e-1687.4
NC_020211:3398281:3403209340320934042371029Serratia marcescens WW4, complete genometype VI secretion protein, TssG family1e-1687.4
NC_009778:1956225:1973284197328419743661083Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1687
NC_009381:1655731:1677437167743716785221086Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-1685.5
NC_006349:400807:4008074008074021771371Burkholderia mallei ATCC 23344 chromosome 2, complete sequencehypothetical protein5e-1685.5
NC_014837:3766426:3787464378746437885341071Pantoea sp. At-9b chromosome, complete genometype VI secretion protein7e-1685.1
NC_010465:2820500:2840999284099928420841086Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0111 family1e-1584.7
NC_017265:2557476:2580505258050525815901086Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-1584.7
NC_017168:3948514:3971543397154339726281086Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-1584.7
NC_014029:1760948:1760948176094817620331086Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-1584.7
NC_004088:2937077:2960107296010729611921086Yersinia pestis KIM, complete genomehypothetical protein1e-1584.7
NC_010465:3919572:392217839221783923161984Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0111 family1e-1584.3
NC_009708:3862044:386710238671023868085984Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-1584.3
NC_009708:2788855:2810553281055328116381086Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-1584
NC_007348:2011957:2032659203265920337081050Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF13052e-1584
NC_005126:3812054:3811002381100238120901089Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-1583.6
NC_008149:442168:458067458067459050984Yersinia pestis Nepal516, complete genomehypothetical protein3e-1582.8
NC_006155:751235:765363765363766346984Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-1582.8
NC_010159:770172:772770772770773753984Yersinia pestis Angola, complete genomehypothetical protein3e-1582.8
NC_010634:732016:747123747123748106984Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein3e-1582.8
NC_003143:524755:538864538864539847984Yersinia pestis CO92, complete genomehypothetical protein3e-1582.8
NC_009381:3558018:356062435606243561607984Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-1582.8
NC_017154:520400:534509534509535492984Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-1582.8
NC_017160:520799:536698536698537681984Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-1582.8
NC_017168:561402:564008564008564991984Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-1582.8
NC_017265:3861259:387634738763473877330984Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-1582.8
NC_005810:4183297:4185903418590341869251023Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein4e-1582.4
NC_004088:4073698:4078756407875640797781023Yersinia pestis KIM, complete genomehypothetical protein4e-1582.4
NC_014029:576459:592427592427593341915Yersinia pestis Z176003 chromosome, complete genomehypothetical protein6e-1479
NC_012962:3568046:3575095357509535761471053Photorhabdus asymbiotica, complete genomehypothetical protein1e-1377.8
NC_010501:3575726:3575726357572635768231098Pseudomonas putida W619, complete genometype VI secretion protein, VC_A0111 family2e-1273.9