Pre_GI: BLASTP Hits

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Query: NC_002947:2809591:2821719 Pseudomonas putida KT2440, complete genome

Start: 2821719, End: 2822312, Length: 594

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was derived from a toluene-degrading isolate, Pseudomonas arvilla strain mt-2 (renamed Pseudomonas putida mt-2), by loss of its plasmid. Common environmental bacterium. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010002:4256651:428231342823134282894582Delftia acidovorans SPH-1, complete genometranscriptional regulator, TetR family3e-48191
NC_017033:1939507:195994219599421960556615Frateuria aurantia DSM 6220 chromosome, complete genometranscriptional regulator2e-46185
NC_012108:904260:918404918404919174771Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (TetR family protein)6e-21100
NC_006512:728281:746456746456747082627Idiomarina loihiensis L2TR, complete genomeTranscriptional regulator, TetR family2e-2099
NC_015856:3059737:308118730811873081783597Collimonas fungivorans Ter331 chromosome, complete genomeTetR family transcriptional regulator7e-1993.6
NC_013422:1732677:174532717453271745968642Halothiobacillus neapolitanus c2, complete genometranscriptional regulator, TetR family5e-1890.9
NC_009439:1075170:109619310961931096795603Pseudomonas mendocina ymp, complete genomeTetR family transcriptional regulator2e-1788.6
NC_015410:1144272:116402411640241164626603Pseudomonas mendocina NK-01 chromosome, complete genomeTetR family transcriptional regulator4e-1787.8
NC_002939:805794:826391826391826981591Geobacter sulfurreducens PCA, complete genometranscriptional regulator, TetR family2e-1582.4
NC_010814:3673983:369544636954463696018573Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family3e-1581.6
CP002797:4603787:463663246366324637288657Escherichia coli NA114, complete genomePutative transcriptional regulator, TetR family3e-1581.6
NC_015675:6228000:622956562295656230176612Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTetR family transcriptional regulator3e-1478.2
NC_009049:80184:951149511495773660Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequencetranscriptional regulator, TetR family4e-1477.8
NC_007493:1:138391383914498660Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceregulatory protein TetR family6e-1477
NC_016112:364723:377077377077377793717Methylomicrobium alcaliphilum chromosome, complete genometranscriptional regulator, TetR family1e-1376.3
NC_008596:3404832:343634934363493436951603Mycobacterium smegmatis str. MC2 155, complete genomeregulatory protein, TetR4e-1374.7
NC_021150:1823874:182683718268371827376540Azotobacter vinelandii CA6, complete genometranscriptional regulator, TetR family7e-1373.9
NC_012560:1823861:182682418268241827363540Azotobacter vinelandii DJ, complete genometranscriptional regulator, TetR family7e-1373.9
NC_013850:1753716:178398017839801784687708Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, TetR family8e-1373.6
NC_015572:1974000:198222719822271982814588Methylomonas methanica MC09 chromosome, complete genomeTetR family transcriptional regulator1e-1272.8
NC_014118:1528851:153288315328831533437555Burkholderia sp. CCGE1002 chromosome chromosome 2, completetranscriptional regulator, TetR family3e-1168.2
NC_009524:1796000:179936617993661799944579Psychrobacter sp. PRwf-1 chromosome, complete genomeTetR family transcriptional regulator2e-0962
NC_008543:2871747:289380228938022894581780Burkholderia cenocepacia HI2424 chromosome 2, complete sequencetranscriptional regulator, TetR family4e-0961.2
NC_008061:2368517:237240123724012373180780Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, TetR family4e-0961.2
NC_010515:1375091:138093013809301381709780Burkholderia cenocepacia MC0-3 chromosome 2, complete sequencetranscriptional regulator, TetR family4e-0961.2
UCMB5137:2054735:209490420949042095476573Bacillus atrophaeus UCMB-5137transcriptional regulator4e-0961.2
NC_008596:3404832:343369134336913434278588Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, putative4e-0961.2
NC_011001:63986:840228402284789768Burkholderia cenocepacia J2315 chromosome 2, complete sequenceTetR family regulatory protein5e-0960.8
NC_014306:3102000:311072331107233111337615Erwinia billingiae Eb661, complete genomeTranscriptional regulator, TetR family7e-0960.5
NC_009659:1129066:114427111442711144846576Janthinobacterium sp. Marseille chromosome, complete genomeTetR family transcriptional regulator1e-0860.1
NC_006349:2311817:818381838800618Burkholderia mallei ATCC 23344 chromosome 2, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_006351:3159630:704370437660618Burkholderia pseudomallei K96243 chromosome 2, complete sequenceTetR-family regulatory protein1e-0859.7
NC_009075:3113393:714371437760618Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_007435:1825741:184612218461221846739618Burkholderia pseudomallei 1710b chromosome II, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_009078:3087759:706270627679618Burkholderia pseudomallei 1106a chromosome II, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_009079:2339756:818381838800618Burkholderia mallei NCTC 10247 chromosome I, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_008784:1151305:117237411723741172991618Burkholderia mallei SAVP1 chromosome I, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_008392:666000:669413669413670042630Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, TetR family1e-0859.7
NC_008600:2353696:236310023631002363594495Bacillus thuringiensis str. Al Hakam, complete genometranscriptional regulator, TetR family2e-0859.3
NC_014335:2274774:227990022799002280316417Bacillus cereus biovar anthracis str. CI chromosome, completeTetR family transcriptional regulator2e-0859.3
NC_017328:1075535:109508510950851095303219Shigella flexneri 2002017 chromosome, complete genomeTetR family transcriptional regulator3e-0858.2
NC_012968:63898:716047160472200597Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family8e-0857
NC_014539:743523:770361770361770942582Burkholderia sp. CCGE1003 chromosome 1, complete sequenceregulatory protein TetR8e-0857
NC_007907:3230513:323385632338563234473618Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0755.1
NC_012791:2233098:224178422417842242434651Variovorax paradoxus S110 chromosome 1, complete genometranscriptional regulator, TetR family3e-0754.7
NC_014153:2125551:213126221312622131957696Thiomonas intermedia K12 chromosome, complete genometranscriptional regulator, TetR family8e-0753.5
NC_015690:3477573:348976134897613490366606Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTetR family transcriptional regulator9e-0753.5
NC_016948:3104403:310910931091093109720612Mycobacterium intracellulare MOTT-64 chromosome, complete genomeTetR family transcriptional regulator2e-0652.8
NC_013595:8553904:856484385648438565427585Streptosporangium roseum DSM 43021, complete genomeputative transcriptional regulator, TetR family1e-0652.8
NC_018515:3108755:313167231316723132274603Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator1e-0652.8
NC_010125:2998619:300348830034883004108621Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcription regulator tetR1e-0652.8
NC_004193:375416:552830552830553441612Oceanobacillus iheyensis HTE831, complete genometranscriptional regulator1e-0652.8
NC_010814:155834:160065160065160667603Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family2e-0652.4
NC_016935:4038265:404800040480004048605606Paenibacillus mucilaginosus 3016 chromosome, complete genomeTetR family transcriptional regulator2e-0652.4
NC_012660:5793200:581114258111425811780639Pseudomonas fluorescens SBW25 chromosome, complete genomeputative TetR family regulatory protein2e-0652.4
NC_020411:765500:785189785189785803615Hydrogenobaculum sp. HO, complete genometranscriptional regulator, TetR family3e-0651.6
NC_015587:765500:785217785217785831615Hydrogenobaculum sp. SHO chromosome, complete genometranscriptional regulator, TetR family3e-0651.6
NC_015557:765500:785162785162785776615Hydrogenobaculum sp. 3684 chromosome, complete genometranscriptional regulator, TetR family3e-0651.6
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome5e-0651.2
NC_010625:1370462:139744613974461398036591Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, TetR family6e-0650.8