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Query: NC_002945:1680751 Mycobacterium bovis AF2122/97, complete genome

Start: 1680751, End: 1703983, Length: 23233

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection. Causative agent of classic bovine tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012207:16819711681971170520423234Mycobacterium bovis BCG str. Tokyo 172, complete genome045960BLASTN svgBLASTP svg
NC_008769:17090781709078173231123234Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome045960BLASTN svgBLASTP svg
NC_009565:16886421688642171216323522Mycobacterium tuberculosis F11, complete genome023680BLASTN svgBLASTP svg
NC_009525:16855221685522171115225631Mycobacterium tuberculosis H37Ra, complete genome023670BLASTN svgBLASTP svg
NC_000962:16840051684005170853924535Mycobacterium tuberculosis H37Rv, complete genome023670BLASTN svgBLASTP svg
NC_002755:16841611684161170880524645Mycobacterium tuberculosis CDC1551, complete genome023660BLASTN svgBLASTP svg
NC_015848:17081761708176173271724542Mycobacterium canettii CIPT 140010059, complete genome023650BLASTN svgBLASTP svg
NC_019950:16899101689910171687926970Mycobacterium canettii CIPT 140060008 complete genome013680BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome02224BLASTN svgBLASTP svg
NC_010612:27776872777687279716619480Mycobacterium marinum M, complete genome0698BLASTN svgBLASTP svg
NC_007512:14596851459685148211322429Pelodictyon luteolum DSM 273, complete genome1e-48202BLASTN svgBLASTP svg
NC_011992:19682581968258199851030253Acidovorax ebreus TPSY, complete genome7e-47196BLASTN svgBLASTP svg
NC_013446:26559552655955268195826004Comamonas testosteroni CNB-2, complete genome2e-28135BLASTN svgBLASTP svg
NC_014034:995661*995661102273727077Rhodobacter capsulatus SB1003 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_011891:315182*31518233809922918Anaeromyxobacter dehalogenans 2CP-1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_011145:306623*30662333037323751Anaeromyxobacter sp. K, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009937:1733196*1733196175210518910Azorhizobium caulinodans ORS 571, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010814:3474856*3474856349401319158Geobacter lovleyi SZ, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_019950:33064193306419333122724809Mycobacterium canettii CIPT 140060008 complete genome3e-1281.8BLASTN svgBLASTP svg
NC_015160:1786350*1786350181459928250Odoribacter splanchnicus DSM 20712 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008702:2942246*2942246296909926854Azoarcus sp. BH72, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014973:28942482894248291621621969Geobacter sp. M18 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_000962:32884643288464331029721834Mycobacterium tuberculosis H37Rv, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002755:32827853282785330371920935Mycobacterium tuberculosis CDC1551, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002945:32462783246278326609919822Mycobacterium bovis AF2122/97, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008769:32424533242453326356021108Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009525:33004563300456332228921834Mycobacterium tuberculosis H37Ra, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009565:32999373299937332177021834Mycobacterium tuberculosis F11, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012207:32374403237440325728519846Mycobacterium bovis BCG str. Tokyo 172, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015848:33437313343731336691823188Mycobacterium canettii CIPT 140010059, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011896:17319717319719198818792Mycobacterium leprae Br4923, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002677:17317017317019196118792Mycobacterium leprae TN, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008148:24980002498000255085152852Rubrobacter xylanophilus DSM 9941, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002935:1237585*1237585131159974015Corynebacterium diphtheriae NCTC 13129, complete genome3e-0661.9BLASTN svgBLASTP svg