Pre_GI: BLASTN Hits

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Query: NC_002945:1095337 Mycobacterium bovis AF2122/97, complete genome

Start: 1095337, End: 1117599, Length: 22263

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection. Causative agent of classic bovine tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008769:1125567*1125567114763722071Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome041690BLASTN svgBLASTP svg
NC_009525:1096386*1096386111845622071Mycobacterium tuberculosis H37Ra, complete genome041590BLASTN svgBLASTP svg
NC_009565:1098847*1098847112029321447Mycobacterium tuberculosis F11, complete genome040290BLASTN svgBLASTP svg
NC_015848:1105892*1105892112732621435Mycobacterium canettii CIPT 140010059, complete genome039960BLASTN svgBLASTP svg
NC_012207:1097228*1097228111789920672Mycobacterium bovis BCG str. Tokyo 172, complete genome038910BLASTN svgBLASTP svg
NC_000962:1095078*1095078111574920672Mycobacterium tuberculosis H37Rv, complete genome038820BLASTN svgBLASTP svg
NC_002755:1095105*1095105111578720683Mycobacterium tuberculosis CDC1551, complete genome038630BLASTN svgBLASTP svg
NC_010397:1099312*1099312112264723336Mycobacterium abscessus chromosome Chromosome, complete sequence4e-39170BLASTN svgBLASTP svg
NC_006361:5146000*5146000517359927600Nocardia farcinica IFM 10152, complete genome2e-38168BLASTN svgBLASTP svg
NC_013159:3554389*3554389357362219234Saccharomonospora viridis DSM 43017, complete genome9e-31143BLASTN svgBLASTP svg
NC_013441:14870581487058151769130634Gordonia bronchialis DSM 43247, complete genome9e-31143BLASTN svgBLASTP svg
NC_010407:32960*329605163318674Clavibacter michiganensis subsp. sepedonicus chromosome, complete2e-19105BLASTN svgBLASTP svg
NC_008699:833737*83373785664022904Nocardioides sp. JS614, complete genome2e-19105BLASTN svgBLASTP svg
NC_014215:1929000*1929000194714618147Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,8e-19103BLASTN svgBLASTP svg
NC_015312:848403*84840386771719315Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_021064:1789980*1789980181232622347Propionibacterium avidum 44067, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_018524:444217*44421747409929883Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013510:1786194*1786194181369827505Thermomonospora curvata DSM 43183, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015635:3860570*3860570389185531286Microlunatus phosphovorus NM-1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_007777:75885758859809922215Frankia sp. CcI3, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010612:54030005403000542141218413Mycobacterium marinum M, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_020133:50205005020500504274122242Mycobacterium liflandii 128FXT, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015138:11430151143015116543022416Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_014168:471000*47100049425123252Segniliparus rotundus DSM 44985 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008618:10915*109153564524731Bifidobacterium adolescentis ATCC 15703, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_020302:22193782219378224609926722Corynebacterium halotolerans YIM 70093 = DSM 44683, complete7e-1073.8BLASTN svgBLASTP svg
NC_008268:5781604*5781604581424432641Rhodococcus sp. RHA1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_011992:77390577390579750923605Acidovorax ebreus TPSY, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013174:23421*234216198738567Jonesia denitrificans DSM 20603, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005835:1345790*1345790136952723738Thermus thermophilus HB27, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006177:280234*28023431920738974Symbiobacterium thermophilum IAM 14863, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006177:835459*83545985883523377Symbiobacterium thermophilum IAM 14863, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014814:3926676*3926676394894522270Mycobacterium sp. Spyr1 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014958:843456*84345686943725982Deinococcus maricopensis DSM 21211 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008278:81866*8186610216620301Frankia alni ACN14a, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008148:30248673024867304671521849Rubrobacter xylanophilus DSM 9941, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015677:3339181*3339181336388124701Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014323:4619344*4619344465241733074Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002936:1395432*1395432141906223631Dehalococcoides ethenogenes 195, complete genome3e-0661.9BLASTN svgBLASTP svg