Pre_GI: BLASTP Hits

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Query: NC_002945:3073370:3088341 Mycobacterium bovis AF2122/97, complete genome

Start: 3088341, End: 3089285, Length: 945

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection. Causative agent of classic bovine tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:3110155:312561331256133126557945Mycobacterium tuberculosis RGTB327 chromosome, complete genomeCRISPR-associated protein Cas61e-180632
NC_009565:3128094:314340831434083144352945Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-180632
NC_009525:3128786:314376131437613144705945Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-180632
NC_008769:3070266:308575630857563086700945Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-180632
NC_000962:3116818:313177031317703132714945Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein1e-180632
NC_002755:3110929:312598431259843126928945Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-180632
NC_012207:3063039:307852930785293079473945Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein1e-180632
NC_012943:1279228:128111312811131282057945Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein1e-180632
NC_016768:1279178:128105712810571282001945Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-180632
NC_016804:3049631:306512130651213066065945Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein1e-180632
NC_019950:3139865:315615731561573156945789Mycobacterium canettii CIPT 140060008 complete genomeConserved CRISPR-associated protein of unknown function Cas68e-142503
NC_015873:1487127:150073615007361501485750Megasphaera elsdenii DSM 20460, complete genomehypothetical protein8e-2097.8
NC_014926:819163:825555825555826382828Thermovibrio ammonificans HB-1 chromosome, complete genomeCRISPR-associated protein Cas61e-0654.3