Pre_GI: BLASTP Hits

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Query: NC_002945:3073370:3080187 Mycobacterium bovis AF2122/97, complete genome

Start: 3080187, End: 3080528, Length: 342

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection. Causative agent of classic bovine tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002755:3110929:311783031178303118171342Mycobacterium tuberculosis CDC1551, complete genomeCRISPR-associated protein Cas21e-59228
NC_008639:2358592:239252523925252392794270Chlorobium phaeobacteroides DSM 266, complete genomeCRISPR-associated protein Cas22e-0651.2
NC_015873:1487127:149458314945831494888306Megasphaera elsdenii DSM 20460, complete genomeCRISPR-associated protein cas23e-1063.9
NC_008554:1664131:168328116832811683559279Syntrophobacter fumaroxidans MPOB, complete genomeCRISPR-associated protein Cas25e-0650.1
NC_016804:3049631:305696730569673057308342Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein1e-59228
NC_000962:3116818:312362531236253123966342Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein1e-59228
NC_017026:3110155:311746831174683117809342Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-59228
NC_009565:3128094:313525431352543135595342Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-59228
NC_008769:3070266:307760230776023077943342Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-59228
NC_012943:1279228:128987012898701290211342Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein1e-59228
NC_012207:3063039:307037530703753070716342Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein1e-59228
NC_016768:1279178:128981412898141290155342Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-59228
NC_009525:3128786:313561631356163135957342Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-59228
NC_015848:3175692:318361231836123183953342Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein4e-59226
NC_019950:3139865:314799531479953148336342Mycobacterium canettii CIPT 140060008 complete genomePutative CRISPR-associated RNAse Cas24e-59226