Pre_GI: BLASTP Hits

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Query: NC_002945:2757821:2779152 Mycobacterium bovis AF2122/97, complete genome

Start: 2779152, End: 2779973, Length: 822

Host Lineage: Mycobacterium bovis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain is a fully virulent strain that was isolated in 1997 in the UK from a cow suffering necrotic lesions in lung and bronchomediastinal lymph nodes. The strain was also reported to infect and persist in badgers that are considered to be a significant source of bovine infection. Causative agent of classic bovine tuberculosis. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. This bacterium is the causative agent of classic bovine tuberculosis, but it can also cause the disease in humans, especially if contaminated milk is consumed without prior pasteurization. The Mycobacterium bovis complex is a diverse group of species, serovars and morphotypes that cause tuberculosis-like diseases in animals and humans. Pasteurization of milk is a major preventitive factor in transmission of bovine tuberculosis to humans. However, spreading the disease through milk and dairy products is still a concern in underdeveloped countries where pasteurization is not practiced.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:2786000:280599228059922806813822Mycobacterium tuberculosis RGTB327 chromosome, complete genomeputative citrate (PRO-3S)-lyase subunit beta2e-142504
NC_012207:2747599:276892427689242769745822Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative citrate (pro-3s)-lyase subunit beta2e-142504
NC_019950:2830682:285195328519532852774822Mycobacterium canettii CIPT 140060008 complete genomePutative citrate (pro-3S)-lyase (beta subunit) CitE (citrase) (citratase) (citritase) (citridesmolase) (citrase aldolase)2e-142504
NC_009525:2802987:282432328243232825144822Mycobacterium tuberculosis H37Ra, complete genomecitrate lyase subunit beta2e-142504
NC_009565:2806000:282567328256732826494822Mycobacterium tuberculosis F11, complete genomecitrate lyase beta subunit citE2e-142504
NC_008769:2754828:277615127761512776972822Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative citrate (pro-3s)-lyase subunit beta2e-142504
NC_015848:2859145:288041628804162881237822Mycobacterium canettii CIPT 140010059, complete genomeputative citrate (PRO-3S)-lyase subunit beta2e-142504
NC_002755:2788000:280784328078432808664822Mycobacterium tuberculosis CDC1551, complete genomecitrate lyase, beta subunit2e-142504
NC_000962:2791019:281235528123552813176822Mycobacterium tuberculosis H37Rv, complete genomePROBABLE CITRATE (PRO-3S)-LYASE (BETA SUBUNIT) CITE (CITRASE) (CITRATASE) (CITRITASE) (CITRIDESMOLASE) (CITRASE ALDOLASE)2e-142504
NC_016804:2735897:275551627555162756337822Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative citrate (Pro-3s)2e-142504
NC_013926:920279:930954930954931802849Aciduliprofundum boonei T469 chromosome, complete genomeCitrate (pro-3S)-lyase6e-29127
NC_017986:5833819:586079958607995861614816Pseudomonas putida ND6 chromosome, complete genomecitrate lyase subunit beta1e-28127
NC_010067:4418000:442217044221704423012843Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-27123
NC_014323:3195178:319434831943483195181834Herbaspirillum seropedicae SmR1 chromosome, complete genomecitrate lyase beta subunit6e-27121
NC_010623:1961685:203222320322232033032810Burkholderia phymatum STM815 chromosome 2, complete sequenceHpcH/HpaI aldolase1e-26120
NC_014329:1261480:127010712701071271009903Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-25117
NC_016781:1261300:126992712699271270829903Corynebacterium pseudotuberculosis 3/99-5 chromosome, completecitrate lyase subunit beta-like protein1e-25117
NC_017031:1261289:126991612699161270818903Corynebacterium pseudotuberculosis P54B96 chromosome, completecitrate lyase subunit beta-like protein1e-25117
NC_017300:1258861:126748812674881268390903Corynebacterium pseudotuberculosis 1002 chromosome, completecitrate lyase subunit beta-like protein1e-25117
NC_017301:1261167:126979412697941270696903Corynebacterium pseudotuberculosis C231 chromosome, completecitrate lyase subunit beta-like protein1e-25117
NC_017303:1261311:126993812699381270840903Corynebacterium pseudotuberculosis I19 chromosome, complete genomecitrate lyase subunit beta-like protein1e-25117
NC_017305:1258840:126746712674671268369903Corynebacterium pseudotuberculosis PAT10 chromosome, completecitrate lyase subunit beta-like protein1e-25117
NC_007953:572926:579114579114579947834Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative HpcH/HpaI aldolase9e-26117
NC_016932:1246235:125486012548601255762903Corynebacterium pseudotuberculosis 316 chromosome, complete genomecitrate lyase subunit beta-like protein9e-25114
NC_002754:1061851:107940710794071080216810Sulfolobus solfataricus P2, complete genomeCitryl-CoA lyase beta subunit homolog (citE)3e-24112
NC_017275:927814:943511943511944320810Sulfolobus islandicus HVE10/4 chromosome, complete genomecitryl-CoA lyase6e-24111
NC_014011:472650:474928474928475815888Aminobacterium colombiense DSM 12261 chromosome, complete genomeCitrate (pro-3S)-lyase6e-24111
NC_004557:2607073:262093826209382621870933Clostridium tetani E88, complete genomecitrate lyase beta chain5e-24111
NC_017904:1683471:171164517116451712511867Mycobacterium sp. MOTT36Y chromosome, complete genomecitrate lyase1e-23110
NC_020126:5470090:548428854842885485205918Myxococcus stipitatus DSM 14675, complete genomeputative citrate lyase subunit beta1e-23110
NC_007963:3553678:356746935674693568293825Chromohalobacter salexigens DSM 3043, complete genomeHpcH/HpaI aldolase5e-23108
NC_003106:1786000:180354818035481804306759Sulfolobus tokodaii str. 7, complete genomehypothetical citrate lyase beta subunit4e-23108
NC_020291:4033000:404631340463134047212900Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecitrate lyase subunit beta3e-23108
NC_015389:616430:676665676665677579915Coriobacterium glomerans PW2 chromosome, complete genomecitrate lyase, beta subunit6e-22104
NC_014923:5868000:588529058852905886189900Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCitryl-CoA lyase6e-22104
NC_019973:5797000:581425058142505815149900Mesorhizobium australicum WSM2073, complete genomecitrate lyase beta subunit6e-22104
NC_015675:6423000:643996164399616440860900Mesorhizobium opportunistum WSM2075 chromosome, complete genomeCitryl-CoA lyase6e-22104
NC_015578:3011133:302736930273693028244876Treponema primitia ZAS-2 chromosome, complete genomecitrate lyase subunit beta (Citrase subunit beta) (Citrate(pro-3S)-lyase subunit beta) (Citryl-CoA lyase subunit)4e-21102
NC_014364:2322269:236357023635702364448879Spirochaeta smaragdinae DSM 11293 chromosome, complete genomecitrate lyase, beta subunit5e-21101
NC_004557:2711702:271862827186282719515888Clostridium tetani E88, complete genomecitrate lyase beta chain8e-2097.4
NC_015259:485015:556198556198556992795Polymorphum gilvum SL003B-26A1 chromosome, complete genomeCitrate lyase, beta subunit, putative1e-1996.7
NC_017316:2710021:272878127287812729668888Enterococcus faecalis OG1RF chromosome, complete genomecitrate (Pro-3S)-lyase2e-1996.7
NC_004668:3184319:320741932074193208306888Enterococcus faecalis V583, complete genomecitrate lyase, beta subunit2e-1996.7
NC_015727:1050500:106516510651651066073909Cupriavidus necator N-1 plasmid BB1p, complete sequencemalyl-CoA lyase Mcl2e-1996.3
NC_010557:679656:709748709748710632885Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceHpcH/HpaI aldolase4e-1995.5
NC_008392:1029134:104131810413181042202885Burkholderia cepacia AMMD chromosome 3, complete sequenceHpcH/HpaI aldolase7e-1994.4
NC_015663:1:407140714952882Enterobacter aerogenes KCTC 2190 chromosome, complete genomecitrate lyase subunit beta8e-1994.4
NC_009633:3457185:347878234787823479654873Alkaliphilus metalliredigens QYMF chromosome, complete genomecitryl-CoA lyase2e-1892.8
NC_014328:4387303:441233444123344413206873Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecitrate lyase subunit beta5e-1891.7
NC_016109:2629301:263776426377642638639876Kitasatospora setae KM-6054, complete genomeputative lyase1e-1790.9
NC_014926:165312:186590186590187558969Thermovibrio ammonificans HB-1 chromosome, complete genomeCitryl-CoA lyase2e-1789.4
NC_009142:2480608:252045625204562521268813Saccharopolyspora erythraea NRRL 2338, complete genomecitrate lyase beta subunit8e-1787.8
NC_008025:316302:364565364565365398834Deinococcus geothermalis DSM 11300, complete genomeCitryl-CoA lyase1e-1687.4
NC_008595:312861:334063334063334989927Mycobacterium avium 104, complete genomemalyl-CoA lyase3e-1685.9
NC_002944:292974:309902309902310828927Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-1685.9
NC_019673:895418:899599899599900558960Saccharothrix espanaensis DSM 44229 complete genomeCitryl-CoA lyase6e-1684.7
NC_014632:336000:343401343401344297897Ilyobacter polytropus DSM 2926 chromosome, complete genomeCitrate (pro-3S)-lyase1e-1584
NC_018750:6869675:687870168787016879666966Streptomyces venezuelae ATCC 10712, complete genomeL-malyl-CoA or beta-methylmalyl-CoA lyase ,actinobacterial type1e-1584
NC_008268:361424:377711377711378688978Rhodococcus sp. RHA1, complete genomecitrate (pro-3S)-lyase beta subunit1e-1583.6
NC_015434:3581001:358392635839263584801876Verrucosispora maris AB-18-032 chromosome, complete genomeHpcH/HpaI aldolase3e-1582.8
NC_021064:303635:304515304515305387873Propionibacterium avidum 44067, complete genomeHpcH/HpaI aldolase/citrate lyase family protein3e-1582.4
NC_016111:6175975:618881261888126189672861Streptomyces cattleya NRRL 8057, complete genomecitrate lyase subunit beta6e-1478.2
NC_014664:2373451:238982523898252390694870Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeCitryl-CoA lyase7e-1477.8
NC_009921:5400663:541024654102465411211966Frankia sp. EAN1pec, complete genomeCitryl-CoA lyase9e-1477.4
NC_015593:2246352:225789022578902258801912Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeCitryl-CoA lyase2e-1376.3
NC_009832:3313058:333047533304753331338864Serratia proteamaculans 568, complete genomeHpcH/HpaI aldolase3e-1375.5
NC_015593:2271097:228890822889082289762855Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeCitryl-CoA lyase1e-1273.9
NC_014217:3431878:344524334452433446142900Starkeya novella DSM 506 chromosome, complete genomeCitrate (pro-3S)-lyase2e-1169.7
NC_002928:3781657:379832937983293799216888Bordetella parapertussis 12822, complete genomeputative citrate lyase7e-1064.7
NC_017046:919249:925536925536925940405Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein2e-0963.5
NC_011274:896802:902978902978903493516Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-0963.2
NC_003197:920000:926181926181926696516Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein2e-0963.2
NC_011080:924326:930503930503931018516Salmonella enterica subsp. enterica serovar Newport str. SL254,citrate lyase2e-0963.2
NC_011083:967260:973437973437973952516Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,citrate lyase2e-0963.2
NC_011205:944125:950301950301950816516Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-0963.2
NC_011294:878896:885072885072885587516Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-0963.2
NC_012125:894955:901125901125901640516Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein2e-0963.2
NC_016810:919266:925442925442925957516Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-0963.2
NC_016831:2108557:212159021215902122105516Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-0963.2
NC_016856:921057:927233927233927748516Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative cytoplasmic protein2e-0963.2
NC_016857:919266:925442925442925957516Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative cytoplasmic protein2e-0963.2
NC_016860:959609:965785965785966300516Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein2e-0963.2
NC_016863:920346:926522926522927037516Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein2e-0963.2
NC_016906:1565868:158246815824681583328861Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative aldolase/lyase2e-0653.5
NC_010803:1132500:114779211477921148739948Chlorobium limicola DSM 245, complete genomeHpcH/HpaI aldolase2e-0653.1
NC_013947:1696671:1712598171259817136861089Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeHpcH/HpaI aldolase3e-0652.8