Pre_GI: BLASTN Hits

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Query: NC_002944:4446083 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 4446083, End: 4467623, Length: 21541

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_020133:942375*94237596559923225Mycobacterium liflandii 128FXT, complete genome01425BLASTN svgBLASTP svg
NC_010612:1005778*1005778103880533028Mycobacterium marinum M, complete genome01409BLASTN svgBLASTP svg
NC_018750:3481476*3481476351379932324Streptomyces venezuelae ATCC 10712, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015966:2337833*2337833238066842836Rhodothermus marinus SG0.5JP17-172 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg