Query: NC_002944:4254011 Mycobacterium avium subsp. paratuberculosis K-10, complete genome
Start: 4254011, End: 4277488, Length: 23478
Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010612:681544 | 681544 | 704563 | 23020 | Mycobacterium marinum M, complete genome | 2e-105 | 391 | BLASTN svg | BLASTP svg |
NC_012522:5895946 | 5895946 | 5923931 | 27986 | Rhodococcus opacus B4, complete genome | 4e-76 | 293 | BLASTN svg | BLASTP svg |
NC_014814:483444 | 483444 | 502365 | 18922 | Mycobacterium sp. Spyr1 chromosome, complete genome | 9e-62 | 246 | BLASTN svg | BLASTP svg |
NC_014659:4299552* | 4299552 | 4343310 | 43759 | Rhodococcus equi 103S, complete genome | 2e-56 | 228 | BLASTN svg | BLASTP svg |
NC_013235:4938798 | 4938798 | 4963123 | 24326 | Nakamurella multipartita DSM 44233, complete genome | 8e-56 | 226 | BLASTN svg | BLASTP svg |
NC_014666:300571* | 300571 | 329240 | 28670 | Frankia sp. EuI1c chromosome, complete genome | 7e-47 | 196 | BLASTN svg | BLASTP svg |
NC_012522:5987644 | 5987644 | 6012869 | 25226 | Rhodococcus opacus B4, complete genome | 6e-35 | 157 | BLASTN svg | BLASTP svg |
NC_008596:6009511 | 6009511 | 6053826 | 44316 | Mycobacterium smegmatis str. MC2 155, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_015635:5154730 | 5154730 | 5206443 | 51714 | Microlunatus phosphovorus NM-1, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_014210:5370868 | 5370868 | 5389078 | 18211 | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome, | 6e-29 | 137 | BLASTN svg | BLASTP svg |
NC_010397:4387500 | 4387500 | 4405928 | 18429 | Mycobacterium abscessus chromosome Chromosome, complete sequence | 2e-28 | 135 | BLASTN svg | BLASTP svg |
NC_018750:3741581 | 3741581 | 3768498 | 26918 | Streptomyces venezuelae ATCC 10712, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
NC_008705:1022252* | 1022252 | 1048286 | 26035 | Mycobacterium sp. KMS, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_008146:1016446* | 1016446 | 1044593 | 28148 | Mycobacterium sp. MCS, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_003155:5443230* | 5443230 | 5463505 | 20276 | Streptomyces avermitilis MA-4680, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
NC_015957:196000 | 196000 | 217780 | 21781 | Streptomyces violaceusniger Tu 4113 chromosome, complete genome | 3e-24 | 121 | BLASTN svg | BLASTP svg |
NC_010407:3174470 | 3174470 | 3197545 | 23076 | Clavibacter michiganensis subsp. sepedonicus chromosome, complete | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_013595:891897 | 891897 | 911544 | 19648 | Streptosporangium roseum DSM 43021, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_013510:262888* | 262888 | 283099 | 20212 | Thermomonospora curvata DSM 43183, complete genome | 3e-18 | 101 | BLASTN svg | BLASTP svg |
NC_014246:651801 | 651801 | 674099 | 22299 | Mobiluncus curtisii ATCC 43063 chromosome, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_015953:3456535 | 3456535 | 3506197 | 49663 | Streptomyces sp. SirexAA-E chromosome, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_006087:2439252 | 2439252 | 2465955 | 26704 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 5e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_006087:345976* | 345976 | 405679 | 59704 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_009077:1027357* | 1027357 | 1064555 | 37199 | Mycobacterium sp. JLS, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_018531:3625810 | 3625810 | 3659592 | 33783 | Arthrobacter sp. Rue61a chromosome, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_018581:1180951 | 1180951 | 1221565 | 40615 | Gordonia sp. KTR9 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_010572:4024810 | 4024810 | 4045985 | 21176 | Streptomyces griseus subsp. griseus NBRC 13350, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014532:1713987 | 1713987 | 1737736 | 23750 | Halomonas elongata DSM 2581, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010001:4730000* | 4730000 | 4755689 | 25690 | Clostridium phytofermentans ISDg, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_015145:1045264 | 1045264 | 1084252 | 38989 | Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |