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Query: NC_002944:4254011 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 4254011, End: 4277488, Length: 23478

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010612:68154468154470456323020Mycobacterium marinum M, complete genome2e-105391BLASTN svgBLASTP svg
NC_012522:58959465895946592393127986Rhodococcus opacus B4, complete genome4e-76293BLASTN svgBLASTP svg
NC_014814:48344448344450236518922Mycobacterium sp. Spyr1 chromosome, complete genome9e-62246BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome2e-56228BLASTN svgBLASTP svg
NC_013235:49387984938798496312324326Nakamurella multipartita DSM 44233, complete genome8e-56226BLASTN svgBLASTP svg
NC_014666:300571*30057132924028670Frankia sp. EuI1c chromosome, complete genome7e-47196BLASTN svgBLASTP svg
NC_012522:59876445987644601286925226Rhodococcus opacus B4, complete genome6e-35157BLASTN svgBLASTP svg
NC_008596:60095116009511605382644316Mycobacterium smegmatis str. MC2 155, complete genome1e-29139BLASTN svgBLASTP svg
NC_015635:51547305154730520644351714Microlunatus phosphovorus NM-1, complete genome1e-29139BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,6e-29137BLASTN svgBLASTP svg
NC_010397:43875004387500440592818429Mycobacterium abscessus chromosome Chromosome, complete sequence2e-28135BLASTN svgBLASTP svg
NC_018750:37415813741581376849826918Streptomyces venezuelae ATCC 10712, complete genome4e-27131BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome2e-25125BLASTN svgBLASTP svg
NC_008146:1016446*1016446104459328148Mycobacterium sp. MCS, complete genome2e-25125BLASTN svgBLASTP svg
NC_003155:5443230*5443230546350520276Streptomyces avermitilis MA-4680, complete genome2e-25125BLASTN svgBLASTP svg
NC_015957:19600019600021778021781Streptomyces violaceusniger Tu 4113 chromosome, complete genome3e-24121BLASTN svgBLASTP svg
NC_010407:31744703174470319754523076Clavibacter michiganensis subsp. sepedonicus chromosome, complete3e-21111BLASTN svgBLASTP svg
NC_013595:89189789189791154419648Streptosporangium roseum DSM 43021, complete genome1e-20109BLASTN svgBLASTP svg
NC_013510:262888*26288828309920212Thermomonospora curvata DSM 43183, complete genome3e-18101BLASTN svgBLASTP svg
NC_014246:65180165180167409922299Mobiluncus curtisii ATCC 43063 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015953:34565353456535350619749663Streptomyces sp. SirexAA-E chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_006087:24392522439252246595526704Leifsonia xyli subsp. xyli str. CTCB07, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_006087:345976*34597640567959704Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009077:1027357*1027357106455537199Mycobacterium sp. JLS, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018531:36258103625810365959233783Arthrobacter sp. Rue61a chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010572:40248104024810404598521176Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014532:17139871713987173773623750Halomonas elongata DSM 2581, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010001:4730000*4730000475568925690Clostridium phytofermentans ISDg, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015145:10452641045264108425238989Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg