Pre_GI: BLASTN Hits

Some Help

Query: NC_002944:4163490 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 4163490, End: 4199728, Length: 36239

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002944:41474314147431417353826108Mycobacterium avium subsp. paratuberculosis K-10, complete genome019920BLASTN svgBLASTP svg
NC_002944:990009900011707318074Mycobacterium avium subsp. paratuberculosis K-10, complete genome02809BLASTN svgBLASTP svg
NC_002944:865425*86542589916033736Mycobacterium avium subsp. paratuberculosis K-10, complete genome02809BLASTN svgBLASTP svg
NC_002944:23738732373873239934625474Mycobacterium avium subsp. paratuberculosis K-10, complete genome02801BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome02545BLASTN svgBLASTP svg
NC_008595:14133541413354144379430441Mycobacterium avium 104, complete genome02323BLASTN svgBLASTP svg
NC_008726:61000061000062882018821Mycobacterium vanbaalenii PYR-1, complete genome01013BLASTN svgBLASTP svg
NC_015576:39766793976679403475658078Mycobacterium sp. JDM601 chromosome, complete genome0985BLASTN svgBLASTP svg
NC_008595:18445001844500186548520986Mycobacterium avium 104, complete genome0954BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome0954BLASTN svgBLASTP svg
NC_008595:51689415168941521359944659Mycobacterium avium 104, complete genome0938BLASTN svgBLASTP svg
NC_008595:31286131286133836925509Mycobacterium avium 104, complete genome0938BLASTN svgBLASTP svg
NC_008595:26610192661019268240621388Mycobacterium avium 104, complete genome0938BLASTN svgBLASTP svg
NC_008595:22152442215244224973534492Mycobacterium avium 104, complete genome0938BLASTN svgBLASTP svg
NC_008595:19518871951887197059018704Mycobacterium avium 104, complete genome0938BLASTN svgBLASTP svg
NC_008595:17923181792318181084718530Mycobacterium avium 104, complete genome0938BLASTN svgBLASTP svg
NC_008703:31500315005301821519Mycobacterium sp. KMS plasmid pMKMS01, complete sequence0775BLASTN svgBLASTP svg
NC_014811:16638916638918662220234Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequence0775BLASTN svgBLASTP svg
NC_008705:17902221790222183895348732Mycobacterium sp. KMS, complete genome0672BLASTN svgBLASTP svg
NC_009077:17256831725683177988554203Mycobacterium sp. JLS, complete genome2e-116428BLASTN svgBLASTP svg
NC_013757:36897336897341230243330Geodermatophilus obscurus DSM 43160, complete genome1e-83319BLASTN svgBLASTP svg
NC_013757:30121303012130303570423575Geodermatophilus obscurus DSM 43160, complete genome3e-81311BLASTN svgBLASTP svg
NC_013757:27068352706835275100644172Geodermatophilus obscurus DSM 43160, complete genome3e-81311BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome3e-81311BLASTN svgBLASTP svg
NC_010397:4150596*4150596418195931364Mycobacterium abscessus chromosome Chromosome, complete sequence2e-60242BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome5e-55224BLASTN svgBLASTP svg
NC_015312:63989316398931641727718347Pseudonocardia dioxanivorans CB1190 chromosome, complete genome3e-41178BLASTN svgBLASTP svg
NC_015671:1678088*1678088170223524148Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_010612:5626259*5626259564509918841Mycobacterium marinum M, complete genome1e-34157BLASTN svgBLASTP svg
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome4e-34155BLASTN svgBLASTP svg
NC_010612:38134813813481384114527665Mycobacterium marinum M, complete genome4e-34155BLASTN svgBLASTP svg
NC_014168:1294000*1294000132534231343Segniliparus rotundus DSM 44985 chromosome, complete genome6e-30141BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome6e-27131BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome9e-26127BLASTN svgBLASTP svg
NC_008705:18399831839983186445724475Mycobacterium sp. KMS, complete genome5e-24121BLASTN svgBLASTP svg
NC_006087:1334500*1334500136229227793Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_010612:83564883564886299927352Mycobacterium marinum M, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_012207:2573562*2573562259732923768Mycobacterium bovis BCG str. Tokyo 172, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_014550:32637833263783328159917817Arthrobacter arilaitensis Re117, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_018681:5490963*5490963552859937637Nocardia brasiliensis ATCC 700358 chromosome, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_015848:38512303851230387671725488Mycobacterium canettii CIPT 140010059, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_013856:16997416997418959919626Azospirillum sp. B510 plasmid pAB510b, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_013856:18976818976820782418057Azospirillum sp. B510 plasmid pAB510b, complete sequence4e-0971.9BLASTN svgBLASTP svg
NC_019950:33064193306419333122724809Mycobacterium canettii CIPT 140060008 complete genome4e-0971.9BLASTN svgBLASTP svg
NC_013131:997692999769291000446227534Catenulispora acidiphila DSM 44928, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_002677:14622331462233148835226120Mycobacterium leprae TN, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008146:15358271535827156295027124Mycobacterium sp. MCS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008146:15776041577604160675629153Mycobacterium sp. MCS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008146:86131986131994414682828Mycobacterium sp. MCS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008705:1022252*1022252104828626035Mycobacterium sp. KMS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008705:15370801537080155764220563Mycobacterium sp. KMS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008705:15577111557711161059952889Mycobacterium sp. KMS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008705:5144433*5144433517009925667Mycobacterium sp. KMS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_008705:86862386862395099082368Mycobacterium sp. KMS, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010612:3969244*3969244401404344800Mycobacterium marinum M, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_011896:14622581462258148837626119Mycobacterium leprae Br4923, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_019673:6362458*6362458639102228565Saccharothrix espanaensis DSM 44229 complete genome3e-0765.9BLASTN svgBLASTP svg
NC_010397:43875004387500440592818429Mycobacterium abscessus chromosome Chromosome, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_014318:9120651*9120651914722326573Amycolatopsis mediterranei U32 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012207:16819711681971170520423234Mycobacterium bovis BCG str. Tokyo 172, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008769:17090781709078173231123234Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002945:16807511680751170398323233Mycobacterium bovis AF2122/97, complete genome4e-0661.9BLASTN svgBLASTP svg