Pre_GI: BLASTN Hits

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Query: NC_002944:4147431 Mycobacterium avium subsp. paratuberculosis K-10, complete genome

Start: 4147431, End: 4173538, Length: 26108

Host Lineage: Mycobacterium avium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a diary herd in Wisconsin, USA in the 1970's. Environmental organism which causes infections in birds and humans. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, Mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium avium is ubiquitous in the environment, and can be found in stagnant waters and soils. This organism causes tuberculosis in birds and disseminated infections in immunocompromized humans (the elderly, children, and especially patients with AIDS). Infection results in a characteristic pulmonary disease which requires expensive drug therapy for successful treatment. Most prevalent colony morphotypes are smooth opaque, smooth transparent and rough, with the last two being the faster growers in vivo.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002944:41634904163490419972836239Mycobacterium avium subsp. paratuberculosis K-10, complete genome019920BLASTN svgBLASTP svg
NC_008595:2432184*2432184245655424371Mycobacterium avium 104, complete genome4e-24121BLASTN svgBLASTP svg
NC_008595:25466962546696258480338108Mycobacterium avium 104, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_010612:52362295236229525609919871Mycobacterium marinum M, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008786:27296352729635277134341709Verminephrobacter eiseniae EF01-2, complete genome5e-1177.8BLASTN svgBLASTP svg